RNA–Protein interactions for RNA: ENST00000461855.3

SPTAN1-204, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-204ENST00000461855 PRKRIP1Q9H875 184 aaPredicted RBP13.6□□□□□ -0.23
SPTAN1-204ENST00000461855 SLC52A2Q9HAB3 445 aa13.6□□□□□ -0.23
SPTAN1-204ENST00000461855 SCN11AQ9UI33 1791 aa13.59□□□□□ -0.23
SPTAN1-204ENST00000461855 SLC4A9Q96Q91 983 aa13.59□□□□□ -0.23
SPTAN1-204ENST00000461855 PLEKHF1Q96S99 279 aa13.59□□□□□ -0.23
SPTAN1-204ENST00000461855 ZNF831Q5JPB2 1677 aa13.59□□□□□ -0.23
SPTAN1-204ENST00000461855 CEMIPQ8WUJ3 1361 aa13.58□□□□□ -0.23
SPTAN1-204ENST00000461855 GNAT3A8MTJ3 354 aa13.58□□□□□ -0.24
SPTAN1-204ENST00000461855 IL17REQ8NFR9 667 aa13.58□□□□□ -0.24
SPTAN1-204ENST00000461855 QSER1Q2KHR3 1735 aa13.58□□□□□ -0.24
SPTAN1-204ENST00000461855 PNPLA7Q6ZV29 1317 aa13.58□□□□□ -0.24
SPTAN1-204ENST00000461855 MAP3K5Q99683 1374 aa13.58□□□□□ -0.24
SPTAN1-204ENST00000461855 ITPK1Q13572 414 aa13.57□□□□□ -0.24
SPTAN1-204ENST00000461855 SGIP1Q9BQI5 828 aa13.57□□□□□ -0.24
SPTAN1-204ENST00000461855 SPON1Q9HCB6 807 aa13.57□□□□□ -0.24
SPTAN1-204ENST00000461855 TAF1LQ8IZX4 1826 aa13.56□□□□□ -0.24
SPTAN1-204ENST00000461855 SLC16A10Q8TF71 515 aa13.56□□□□□ -0.24
SPTAN1-204ENST00000461855 TUBGCP6Q96RT7 1819 aa13.55□□□□□ -0.24
SPTAN1-204ENST00000461855 HTATSF1O43719 755 aaKnown RBP13.55□□□□□ -0.24
SPTAN1-204ENST00000461855 PTGER2P43116 358 aa13.55□□□□□ -0.24
SPTAN1-204ENST00000461855 LINC00116Q8NCU8 138 aa13.55□□□□□ -0.24
SPTAN1-204ENST00000461855 MTFR1LQ9H019 292 aa13.55□□□□□ -0.24
SPTAN1-204ENST00000461855 TFCP2L1Q9NZI6 479 aa13.55□□□□□ -0.24
SPTAN1-204ENST00000461855 C5P01031 1676 aa13.55□□□□□ -0.24
SPTAN1-204ENST00000461855 VIRMAQ69YN4 1812 aaKnown RBP13.55□□□□□ -0.24
SPTAN1-204ENST00000461855 ATP6V1AP38606 617 aa13.54□□□□□ -0.24
SPTAN1-204ENST00000461855 RC3H1Q5TC82 1133 aaKnown RBP13.54□□□□□ -0.24
SPTAN1-204ENST00000461855 CICQ96RK0 1608 aaPredicted RBP13.53□□□□□ -0.24
SPTAN1-204ENST00000461855 C4BP0C0L5 1744 aa13.53□□□□□ -0.24
SPTAN1-204ENST00000461855 ZBTB7AO95365 584 aa13.53□□□□□ -0.24
SPTAN1-204ENST00000461855 AMIGO3Q86WK7 504 aa13.53□□□□□ -0.24
SPTAN1-204ENST00000461855 COL23A1Q86Y22 540 aaPredicted RBP13.53□□□□□ -0.24
SPTAN1-204ENST00000461855 FLAD1Q8NFF5 587 aa13.53□□□□□ -0.24
SPTAN1-204ENST00000461855 PNNQ9H307 717 aaKnown RBP13.53□□□□□ -0.24
SPTAN1-204ENST00000461855 COL24A1Q17RW2 1714 aa13.53□□□□□ -0.24
SPTAN1-204ENST00000461855 CNTNAP4Q9C0A0 1308 aa13.52□□□□□ -0.25
SPTAN1-204ENST00000461855 KCPQ6ZWJ8 1503 aa13.51□□□□□ -0.25
SPTAN1-204ENST00000461855 SSFA2P28290 1259 aa13.51□□□□□ -0.25
SPTAN1-204ENST00000461855 VSIG10Q8N0Z9 540 aa13.51□□□□□ -0.25
SPTAN1-204ENST00000461855 RBM42Q9BTD8 480 aaKnown RBP13.51□□□□□ -0.25
SPTAN1-204ENST00000461855 PTCD1O75127 700 aaKnown RBP13.5□□□□□ -0.25
SPTAN1-204ENST00000461855 TEFQ10587 303 aa13.5□□□□□ -0.25
SPTAN1-204ENST00000461855 SLC39A6Q13433 755 aa13.5□□□□□ -0.25
SPTAN1-204ENST00000461855 NFE2L2Q16236 605 aa13.5□□□□□ -0.25
SPTAN1-204ENST00000461855 AK7Q96M32 723 aa13.5□□□□□ -0.25
SPTAN1-204ENST00000461855 ATF5Q9Y2D1 282 aaPredicted RBP13.5□□□□□ -0.25
SPTAN1-204ENST00000461855 SIPA1L3O60292 1781 aaPredicted RBP13.5□□□□□ -0.25
SPTAN1-204ENST00000461855 UBR3Q6ZT12 1888 aa13.49□□□□□ -0.25
SPTAN1-204ENST00000461855 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.49□□□□□ -0.25
SPTAN1-204ENST00000461855 ZNF790Q6PG37 636 aa13.49□□□□□ -0.25
SPTAN1-204ENST00000461855 COL5A3P25940 1745 aaPredicted RBP13.49□□□□□ -0.25
SPTAN1-204ENST00000461855 UBR2Q8IWV8 1755 aa13.48□□□□□ -0.25
SPTAN1-204ENST00000461855 RPS6KA4O75676 772 aa13.48□□□□□ -0.25
SPTAN1-204ENST00000461855 INTS5Q6P9B9 1019 aaKnown RBP13.48□□□□□ -0.25
SPTAN1-204ENST00000461855 MCM10Q7L590 875 aa13.48□□□□□ -0.25
SPTAN1-204ENST00000461855 RTF1Q92541 710 aaKnown RBP13.48□□□□□ -0.25
SPTAN1-204ENST00000461855 NEFMP07197 916 aa13.47□□□□□ -0.25
SPTAN1-204ENST00000461855 CYP19A1P11511 503 aaPredicted RBP13.47□□□□□ -0.25
SPTAN1-204ENST00000461855 ADRA2BP18089 450 aa13.47□□□□□ -0.25
SPTAN1-204ENST00000461855 DCTN1Q14203 1278 aa13.47□□□□□ -0.25
SPTAN1-204ENST00000461855 DNAJC10Q8IXB1 793 aa13.47□□□□□ -0.25
SPTAN1-204ENST00000461855 ADAMTS8Q9UP79 889 aa13.47□□□□□ -0.25
SPTAN1-204ENST00000461855 TJP1Q07157 1748 aa13.47□□□□□ -0.25
SPTAN1-204ENST00000461855 MYH14Q7Z406 1995 aaKnown RBP13.46□□□□□ -0.25
SPTAN1-204ENST00000461855 GNPATO15228 680 aa13.46□□□□□ -0.25
SPTAN1-204ENST00000461855 CRKLP46109 303 aaKnown RBP13.46□□□□□ -0.25
SPTAN1-204ENST00000461855 SMIM5Q71RC9 77 aa13.46□□□□□ -0.25
SPTAN1-204ENST00000461855 ZNF496Q96IT1 587 aaPredicted RBP13.46□□□□□ -0.25
SPTAN1-204ENST00000461855 RTCBQ9Y3I0 505 aaKnown RBP13.46□□□□□ -0.25
SPTAN1-204ENST00000461855 HEG1Q9ULI3 1381 aa13.45□□□□□ -0.26
SPTAN1-204ENST00000461855 BTBD11A6QL63 1104 aa13.45□□□□□ -0.26
SPTAN1-204ENST00000461855 KCNQ3O43525 872 aa13.45□□□□□ -0.26
SPTAN1-204ENST00000461855 TMPOP42166 694 aaKnown RBP13.45□□□□□ -0.26
SPTAN1-204ENST00000461855 TAF7Q15545 349 aaPredicted RBP13.45□□□□□ -0.26
SPTAN1-204ENST00000461855 RUNDC1Q96C34 613 aa13.45□□□□□ -0.26
SPTAN1-204ENST00000461855 ARXQ96QS3 562 aa13.45□□□□□ -0.26
SPTAN1-204ENST00000461855 MAPK8IP3Q9UPT6 1336 aa13.44□□□□□ -0.26
SPTAN1-204ENST00000461855 WDR43Q15061 677 aaKnown RBP eCLIP13.44□□□□□ -0.26
SPTAN1-204ENST00000461855 CCDC184Q52MB2 194 aa13.44□□□□□ -0.26
SPTAN1-204ENST00000461855 TRAPPC3LQ5T215 181 aa13.44□□□□□ -0.26
SPTAN1-204ENST00000461855 TTC5Q8N0Z6 440 aa13.44□□□□□ -0.26
SPTAN1-204ENST00000461855 ARHGEF1Q92888 912 aaKnown RBP13.44□□□□□ -0.26
SPTAN1-204ENST00000461855 TEX13AQ9BXU3 409 aaPredicted RBP13.44□□□□□ -0.26
SPTAN1-204ENST00000461855 PHF14O94880 888 aa13.43□□□□□ -0.26
SPTAN1-204ENST00000461855 RIPK4P57078 832 aa13.43□□□□□ -0.26
SPTAN1-204ENST00000461855 PNISRQ8TF01 805 aaKnown RBP13.43□□□□□ -0.26
SPTAN1-204ENST00000461855 FMNL2Q96PY5 1086 aa13.43□□□□□ -0.26
SPTAN1-204ENST00000461855 CCDC87Q9NVE4 849 aa13.43□□□□□ -0.26
SPTAN1-204ENST00000461855 PPP1R1BQ9UD71 204 aaPredicted RBP13.43□□□□□ -0.26
SPTAN1-204ENST00000461855 DLG5Q8TDM6 1919 aa13.43□□□□□ -0.26
SPTAN1-204ENST00000461855 SOS1Q07889 1333 aaPredicted RBP13.42□□□□□ -0.26
SPTAN1-204ENST00000461855 ANP32CO43423 234 aa13.42□□□□□ -0.26
SPTAN1-204ENST00000461855 POLD1P28340 1107 aa13.42□□□□□ -0.26
SPTAN1-204ENST00000461855 SYT17Q9BSW7 474 aa13.42□□□□□ -0.26
SPTAN1-204ENST00000461855 FHDC1Q9C0D6 1143 aaPredicted RBP13.42□□□□□ -0.26
SPTAN1-204ENST00000461855 BABAM1Q9NWV8 329 aa13.42□□□□□ -0.26
SPTAN1-204ENST00000461855 MSH5O43196 834 aa13.41□□□□□ -0.26
SPTAN1-204ENST00000461855 STARD3NLO95772 234 aa13.41□□□□□ -0.26
SPTAN1-204ENST00000461855 GYS1P13807 737 aa13.41□□□□□ -0.26
SPTAN1-204ENST00000461855 TRIM35Q9UPQ4 493 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms