RNA–Protein interactions for RNA: ENST00000461762.5

C9orf78-204, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-204ENST00000461762 STK31Q9BXU1 1019 aa18.48■□□□□ 0.55
C9orf78-204ENST00000461762 GNAI3P08754 354 aa18.47■□□□□ 0.55
C9orf78-204ENST00000461762 FLIIQ13045 1269 aa18.47■□□□□ 0.55
C9orf78-204ENST00000461762 CAVIN1Q6NZI2 390 aaKnown RBP18.47■□□□□ 0.55
C9orf78-204ENST00000461762 ESYT1Q9BSJ8 1104 aa18.47■□□□□ 0.55
C9orf78-204ENST00000461762 LRRCC1Q9C099 1032 aa18.47■□□□□ 0.55
C9orf78-204ENST00000461762 PRPF40AO75400 957 aaKnown RBP18.46■□□□□ 0.55
C9orf78-204ENST00000461762 CCDC30Q5VVM6 783 aa18.46■□□□□ 0.55
C9orf78-204ENST00000461762 STAP2Q9UGK3 403 aa18.46■□□□□ 0.55
C9orf78-204ENST00000461762 CEP170BQ9Y4F5 1589 aaPredicted RBP18.46■□□□□ 0.55
C9orf78-204ENST00000461762 PNMA6EA0A0J9YXQ4 647 aa18.46■□□□□ 0.55
C9orf78-204ENST00000461762 GPT2Q8TD30 523 aa18.46■□□□□ 0.55
C9orf78-204ENST00000461762 IL17RAQ96F46 866 aa18.46■□□□□ 0.55
C9orf78-204ENST00000461762 MX1P20591 662 aa18.45■□□□□ 0.54
C9orf78-204ENST00000461762 MCM2P49736 904 aa18.45■□□□□ 0.54
C9orf78-204ENST00000461762 NEK4P51957 841 aa18.45■□□□□ 0.54
C9orf78-204ENST00000461762 TMX3Q96JJ7 454 aa18.45■□□□□ 0.54
C9orf78-204ENST00000461762 NCLP19338 710 aaKnown RBP18.45■□□□□ 0.54
C9orf78-204ENST00000461762 AMPHP49418 695 aa18.45■□□□□ 0.54
C9orf78-204ENST00000461762 CUL4AQ13619 759 aa18.45■□□□□ 0.54
C9orf78-204ENST00000461762 TSHZ3Q63HK5 1081 aa18.45■□□□□ 0.54
C9orf78-204ENST00000461762 SOS1Q07889 1333 aaPredicted RBP18.44■□□□□ 0.54
C9orf78-204ENST00000461762 CHMLP26374 656 aa18.44■□□□□ 0.54
C9orf78-204ENST00000461762 SLC26A8Q96RN1 970 aa18.44■□□□□ 0.54
C9orf78-204ENST00000461762 SLIT1O75093 1534 aa18.44■□□□□ 0.54
C9orf78-204ENST00000461762 ANAPC15P60006 121 aa18.44■□□□□ 0.54
C9orf78-204ENST00000461762 ANP32BQ92688 251 aaKnown RBP18.44■□□□□ 0.54
C9orf78-204ENST00000461762 AK9Q5TCS8 1911 aa18.43■□□□□ 0.54
C9orf78-204ENST00000461762 GNAT3A8MTJ3 354 aa18.43■□□□□ 0.54
C9orf78-204ENST00000461762 FKBP5Q13451 457 aaPredicted RBP18.43■□□□□ 0.54
C9orf78-204ENST00000461762 AMOTL2Q9Y2J4 779 aa18.43■□□□□ 0.54
C9orf78-204ENST00000461762 ARHGAP23Q9P227 1491 aa18.43■□□□□ 0.54
C9orf78-204ENST00000461762 SRCIN1Q9C0H9 1055 aa18.42■□□□□ 0.54
C9orf78-204ENST00000461762 RBSNQ9H1K0 784 aa18.42■□□□□ 0.54
C9orf78-204ENST00000461762 RIMS1Q86UR5 1692 aaKnown RBP18.42■□□□□ 0.54
C9orf78-204ENST00000461762 BABAM1Q9NWV8 329 aa18.42■□□□□ 0.54
C9orf78-204ENST00000461762 EID1Q9Y6B2 187 aa18.42■□□□□ 0.54
C9orf78-204ENST00000461762 ZSCAN30Q86W11 494 aa18.41■□□□□ 0.54
C9orf78-204ENST00000461762 NGDNQ8NEJ9 315 aaKnown RBP18.41■□□□□ 0.54
C9orf78-204ENST00000461762 IL17REQ8NFR9 667 aa18.41■□□□□ 0.54
C9orf78-204ENST00000461762 PALD1Q9ULE6 856 aa18.41■□□□□ 0.54
C9orf78-204ENST00000461762 DIP2AQ14689 1571 aa18.41■□□□□ 0.54
C9orf78-204ENST00000461762 BRD1O95696 1058 aa18.41■□□□□ 0.54
C9orf78-204ENST00000461762 PRIM1P49642 420 aaKnown RBP18.41■□□□□ 0.54
C9orf78-204ENST00000461762 USP44Q9H0E7 712 aa18.41■□□□□ 0.54
C9orf78-204ENST00000461762 MCCP23508 829 aa18.4■□□□□ 0.54
C9orf78-204ENST00000461762 INTS4Q96HW7 963 aaKnown RBP18.4■□□□□ 0.54
C9orf78-204ENST00000461762 TBX22Q9Y458 520 aa18.4■□□□□ 0.54
C9orf78-204ENST00000461762 AOX1Q06278 1338 aa18.4■□□□□ 0.54
C9orf78-204ENST00000461762 FMN2Q9NZ56 1722 aa18.4■□□□□ 0.54
C9orf78-204ENST00000461762 LRRC37A3O60309 1634 aa18.4■□□□□ 0.54
C9orf78-204ENST00000461762 HS1BP3Q53T59 392 aa18.4■□□□□ 0.54
C9orf78-204ENST00000461762 CHAMP1Q96JM3 812 aa18.4■□□□□ 0.54
C9orf78-204ENST00000461762 PDLIM2Q96JY6 352 aa18.4■□□□□ 0.54
C9orf78-204ENST00000461762 RBM27Q9P2N5 1060 aaKnown RBP18.4■□□□□ 0.54
C9orf78-204ENST00000461762 LRRFIP2Q9Y608 721 aaKnown RBP18.4■□□□□ 0.54
C9orf78-204ENST00000461762 TAF7Q15545 349 aaPredicted RBP18.39■□□□□ 0.53
C9orf78-204ENST00000461762 UBE2Q2Q8WVN8 375 aa18.39■□□□□ 0.53
C9orf78-204ENST00000461762 RILPL2Q969X0 211 aa18.39■□□□□ 0.53
C9orf78-204ENST00000461762 TMEM63CQ9P1W3 806 aa18.39■□□□□ 0.53
C9orf78-204ENST00000461762 XRN1Q8IZH2 1706 aaKnown RBP18.38■□□□□ 0.53
C9orf78-204ENST00000461762 EPB41L2O43491 1005 aaKnown RBP18.38■□□□□ 0.53
C9orf78-204ENST00000461762 HOXC9P31274 260 aa18.38■□□□□ 0.53
C9orf78-204ENST00000461762 UNC5CLQ8IV45 518 aa18.38■□□□□ 0.53
C9orf78-204ENST00000461762 SSH3Q8TE77 659 aa18.38■□□□□ 0.53
C9orf78-204ENST00000461762 NECTIN2Q92692 538 aa18.38■□□□□ 0.53
C9orf78-204ENST00000461762 TUBGCP6Q96RT7 1819 aa18.38■□□□□ 0.53
C9orf78-204ENST00000461762 TRIM6-TRIM34B2RNG4 842 aa18.38■□□□□ 0.53
C9orf78-204ENST00000461762 ANO2Q9NQ90 1003 aa18.38■□□□□ 0.53
C9orf78-204ENST00000461762 NSFL1CQ9UNZ2 370 aaKnown RBP18.38■□□□□ 0.53
C9orf78-204ENST00000461762 PXDNLA1KZ92 1463 aa18.37■□□□□ 0.53
C9orf78-204ENST00000461762 NLRP6P59044 892 aa18.37■□□□□ 0.53
C9orf78-204ENST00000461762 LRSAM1Q6UWE0 723 aa18.37■□□□□ 0.53
C9orf78-204ENST00000461762 NWD1Q149M9 1564 aa18.37■□□□□ 0.53
C9orf78-204ENST00000461762 MAP3K5Q99683 1374 aa18.37■□□□□ 0.53
C9orf78-204ENST00000461762 FAM208AQ9UK61 1670 aaKnown RBP18.36■□□□□ 0.53
C9orf78-204ENST00000461762 MBD3O95983 291 aa18.35■□□□□ 0.53
C9orf78-204ENST00000461762 PIK3C2AO00443 1686 aa18.35■□□□□ 0.53
C9orf78-204ENST00000461762 RAB11FIP3O75154 756 aa18.35■□□□□ 0.53
C9orf78-204ENST00000461762 UBTFL1P0CB47 393 aaPredicted RBP18.35■□□□□ 0.53
C9orf78-204ENST00000461762 POLA2Q14181 598 aa18.35■□□□□ 0.53
C9orf78-204ENST00000461762 FOXD4L5Q5VV16 416 aaPredicted RBP18.34■□□□□ 0.53
C9orf78-204ENST00000461762 FOXD4L4Q8WXT5 416 aaPredicted RBP18.34■□□□□ 0.53
C9orf78-204ENST00000461762 IL25Q9H293 177 aa18.34■□□□□ 0.53
C9orf78-204ENST00000461762 HSPA4P34932 840 aa18.33■□□□□ 0.53
C9orf78-204ENST00000461762 OFD1O75665 1012 aa18.33■□□□□ 0.52
C9orf78-204ENST00000461762 PLEKHG5O94827 1062 aa18.33■□□□□ 0.52
C9orf78-204ENST00000461762 PHAXQ9H814 394 aaKnown RBP18.33■□□□□ 0.52
C9orf78-204ENST00000461762 IL1RAPL2Q9NP60 686 aa18.33■□□□□ 0.52
C9orf78-204ENST00000461762 NOL7Q9UMY1 257 aaKnown RBP18.33■□□□□ 0.52
C9orf78-204ENST00000461762 SYCE3A1L190 88 aa18.32■□□□□ 0.52
C9orf78-204ENST00000461762 CEBPAP49715 358 aaPredicted RBP18.32■□□□□ 0.52
C9orf78-204ENST00000461762 ANKARQ7Z5J8 1434 aa18.32■□□□□ 0.52
C9orf78-204ENST00000461762 HDGFL1Q5TGJ6 251 aa18.32■□□□□ 0.52
C9orf78-204ENST00000461762 PPP1R42Q7Z4L9 355 aa18.32■□□□□ 0.52
C9orf78-204ENST00000461762 NUTM1Q86Y26 1132 aa18.31■□□□□ 0.52
C9orf78-204ENST00000461762 PI4K2BQ8TCG2 481 aa18.31■□□□□ 0.52
C9orf78-204ENST00000461762 UPF3BQ9BZI7 483 aaKnown RBP18.31■□□□□ 0.52
C9orf78-204ENST00000461762 TPM2P07951 284 aa18.31■□□□□ 0.52
C9orf78-204ENST00000461762 MSNP26038 577 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms