RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 C5P01031 1676 aa14.06□□□□□ -0.16
TRAPPC12-213ENST00000461577 TAF1LQ8IZX4 1826 aa14.06□□□□□ -0.16
TRAPPC12-213ENST00000461577 ANP32CO43423 234 aa14.05□□□□□ -0.16
TRAPPC12-213ENST00000461577 WDR43Q15061 677 aaKnown RBP eCLIP14.05□□□□□ -0.16
TRAPPC12-213ENST00000461577 ZNF827Q17R98 1081 aa14.05□□□□□ -0.16
TRAPPC12-213ENST00000461577 RTF1Q92541 710 aaKnown RBP14.05□□□□□ -0.16
TRAPPC12-213ENST00000461577 AKT1S1Q96B36 256 aa14.05□□□□□ -0.16
TRAPPC12-213ENST00000461577 SLC52A2Q9HAB3 445 aa14.05□□□□□ -0.16
TRAPPC12-213ENST00000461577 TFCP2L1Q9NZI6 479 aa14.05□□□□□ -0.16
TRAPPC12-213ENST00000461577 MAPK8IP3Q9UPT6 1336 aa14.05□□□□□ -0.16
TRAPPC12-213ENST00000461577 ADAMTS7Q9UKP4 1686 aa14.04□□□□□ -0.16
TRAPPC12-213ENST00000461577 ATP6V1AP38606 617 aa14.04□□□□□ -0.16
TRAPPC12-213ENST00000461577 TEFQ10587 303 aa14.04□□□□□ -0.16
TRAPPC12-213ENST00000461577 MRC1P22897 1456 aa14.04□□□□□ -0.16
TRAPPC12-213ENST00000461577 CASZ1Q86V15 1759 aa14.04□□□□□ -0.16
TRAPPC12-213ENST00000461577 IL17REQ8NFR9 667 aa14.03□□□□□ -0.16
TRAPPC12-213ENST00000461577 QSER1Q2KHR3 1735 aa14.03□□□□□ -0.16
TRAPPC12-213ENST00000461577 TUBGCP6Q96RT7 1819 aa14.03□□□□□ -0.16
TRAPPC12-213ENST00000461577 C4BP0C0L5 1744 aa14.02□□□□□ -0.16
TRAPPC12-213ENST00000461577 LRP5O75197 1615 aa14.02□□□□□ -0.16
TRAPPC12-213ENST00000461577 PTCD1O75127 700 aaKnown RBP14.02□□□□□ -0.17
TRAPPC12-213ENST00000461577 AK7Q96M32 723 aa14.02□□□□□ -0.17
TRAPPC12-213ENST00000461577 PLEKHF1Q96S99 279 aa14.02□□□□□ -0.17
TRAPPC12-213ENST00000461577 DLG5Q8TDM6 1919 aa14.02□□□□□ -0.17
TRAPPC12-213ENST00000461577 PDGFDQ9GZP0 370 aaPredicted RBP14.01□□□□□ -0.17
TRAPPC12-213ENST00000461577 SPON1Q9HCB6 807 aa14.01□□□□□ -0.17
TRAPPC12-213ENST00000461577 ZNF831Q5JPB2 1677 aa14.01□□□□□ -0.17
TRAPPC12-213ENST00000461577 MSH5O43196 834 aa14□□□□□ -0.17
TRAPPC12-213ENST00000461577 HTATSF1O43719 755 aaKnown RBP14□□□□□ -0.17
TRAPPC12-213ENST00000461577 ZBTB7AO95365 584 aa14□□□□□ -0.17
TRAPPC12-213ENST00000461577 SLC39A6Q13433 755 aa14□□□□□ -0.17
TRAPPC12-213ENST00000461577 ITPK1Q13572 414 aa14□□□□□ -0.17
TRAPPC12-213ENST00000461577 NFE2L2Q16236 605 aa14□□□□□ -0.17
TRAPPC12-213ENST00000461577 TTC5Q8N0Z6 440 aa14□□□□□ -0.17
TRAPPC12-213ENST00000461577 LINC00116Q8NCU8 138 aa14□□□□□ -0.17
TRAPPC12-213ENST00000461577 SIPA1L3O60292 1781 aaPredicted RBP13.99□□□□□ -0.17
TRAPPC12-213ENST00000461577 PNPLA7Q6ZV29 1317 aa13.99□□□□□ -0.17
TRAPPC12-213ENST00000461577 MCM10Q7L590 875 aa13.99□□□□□ -0.17
TRAPPC12-213ENST00000461577 CEMIPQ8WUJ3 1361 aa13.98□□□□□ -0.17
TRAPPC12-213ENST00000461577 DCTN1Q14203 1278 aa13.98□□□□□ -0.17
TRAPPC12-213ENST00000461577 CCDC146Q8IYE0 955 aa13.98□□□□□ -0.17
TRAPPC12-213ENST00000461577 FLAD1Q8NFF5 587 aa13.98□□□□□ -0.17
TRAPPC12-213ENST00000461577 SLC4A9Q96Q91 983 aa13.98□□□□□ -0.17
TRAPPC12-213ENST00000461577 MTFR1LQ9H019 292 aa13.98□□□□□ -0.17
TRAPPC12-213ENST00000461577 ADAMTS8Q9UP79 889 aa13.98□□□□□ -0.17
TRAPPC12-213ENST00000461577 ATF5Q9Y2D1 282 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC12-213ENST00000461577 BTBD11A6QL63 1104 aa13.97□□□□□ -0.17
TRAPPC12-213ENST00000461577 GNPATO15228 680 aa13.97□□□□□ -0.17
TRAPPC12-213ENST00000461577 SLC16A10Q8TF71 515 aa13.97□□□□□ -0.17
TRAPPC12-213ENST00000461577 RUNDC1Q96C34 613 aa13.97□□□□□ -0.17
TRAPPC12-213ENST00000461577 PPP1R1BQ9UD71 204 aaPredicted RBP13.97□□□□□ -0.17
TRAPPC12-213ENST00000461577 COL5A3P25940 1745 aaPredicted RBP13.97□□□□□ -0.17
TRAPPC12-213ENST00000461577 UBR3Q6ZT12 1888 aa13.97□□□□□ -0.17
TRAPPC12-213ENST00000461577 TJP1Q07157 1748 aa13.96□□□□□ -0.17
TRAPPC12-213ENST00000461577 PHF14O94880 888 aa13.96□□□□□ -0.17
TRAPPC12-213ENST00000461577 RIPK4P57078 832 aa13.96□□□□□ -0.17
TRAPPC12-213ENST00000461577 COL23A1Q86Y22 540 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC12-213ENST00000461577 UBR2Q8IWV8 1755 aa13.96□□□□□ -0.18
TRAPPC12-213ENST00000461577 KCPQ6ZWJ8 1503 aa13.95□□□□□ -0.18
TRAPPC12-213ENST00000461577 CNTNAP4Q9C0A0 1308 aa13.95□□□□□ -0.18
TRAPPC12-213ENST00000461577 SSFA2P28290 1259 aa13.95□□□□□ -0.18
TRAPPC12-213ENST00000461577 TMPOP42166 694 aaKnown RBP13.95□□□□□ -0.18
TRAPPC12-213ENST00000461577 RC3H1Q5TC82 1133 aaKnown RBP13.95□□□□□ -0.18
TRAPPC12-213ENST00000461577 ZNF790Q6PG37 636 aa13.95□□□□□ -0.18
TRAPPC12-213ENST00000461577 RTCBQ9Y3I0 505 aaKnown RBP13.95□□□□□ -0.18
TRAPPC12-213ENST00000461577 CICQ96RK0 1608 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC12-213ENST00000461577 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.94□□□□□ -0.18
TRAPPC12-213ENST00000461577 LMOD3Q0VAK6 560 aa13.94□□□□□ -0.18
TRAPPC12-213ENST00000461577 TAF7Q15545 349 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC12-213ENST00000461577 NEUROD2Q15784 382 aa13.94□□□□□ -0.18
TRAPPC12-213ENST00000461577 CCDC184Q52MB2 194 aa13.94□□□□□ -0.18
TRAPPC12-213ENST00000461577 DNAJC10Q8IXB1 793 aa13.94□□□□□ -0.18
TRAPPC12-213ENST00000461577 VSIG10Q8N0Z9 540 aa13.94□□□□□ -0.18
TRAPPC12-213ENST00000461577 FMNL2Q96PY5 1086 aa13.94□□□□□ -0.18
TRAPPC12-213ENST00000461577 MRS2Q9HD23 443 aa13.94□□□□□ -0.18
TRAPPC12-213ENST00000461577 POLD1P28340 1107 aa13.93□□□□□ -0.18
TRAPPC12-213ENST00000461577 CRKLP46109 303 aaKnown RBP13.93□□□□□ -0.18
TRAPPC12-213ENST00000461577 SMIM5Q71RC9 77 aa13.93□□□□□ -0.18
TRAPPC12-213ENST00000461577 RRP7AQ9Y3A4 280 aaKnown RBP13.93□□□□□ -0.18
TRAPPC12-213ENST00000461577 MYH14Q7Z406 1995 aaKnown RBP13.92□□□□□ -0.18
TRAPPC12-213ENST00000461577 KCNQ3O43525 872 aa13.92□□□□□ -0.18
TRAPPC12-213ENST00000461577 RPS6KA4O75676 772 aa13.92□□□□□ -0.18
TRAPPC12-213ENST00000461577 PTGER2P43116 358 aa13.92□□□□□ -0.18
TRAPPC12-213ENST00000461577 TRAPPC3LQ5T215 181 aa13.92□□□□□ -0.18
TRAPPC12-213ENST00000461577 AMIGO3Q86WK7 504 aa13.92□□□□□ -0.18
TRAPPC12-213ENST00000461577 PNISRQ8TF01 805 aaKnown RBP13.92□□□□□ -0.18
TRAPPC12-213ENST00000461577 ZNF496Q96IT1 587 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC12-213ENST00000461577 THUMPD2Q9BTF0 503 aaKnown RBP13.92□□□□□ -0.18
TRAPPC12-213ENST00000461577 TEX13AQ9BXU3 409 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC12-213ENST00000461577 HEG1Q9ULI3 1381 aa13.92□□□□□ -0.18
TRAPPC12-213ENST00000461577 STARD3NLO95772 234 aa13.91□□□□□ -0.18
TRAPPC12-213ENST00000461577 CYP19A1P11511 503 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC12-213ENST00000461577 CCDC87Q9NVE4 849 aa13.91□□□□□ -0.18
TRAPPC12-213ENST00000461577 ADRA2BP18089 450 aa13.9□□□□□ -0.18
TRAPPC12-213ENST00000461577 MSL1Q68DK7 614 aa13.9□□□□□ -0.18
TRAPPC12-213ENST00000461577 MIS18AQ9NYP9 233 aa13.9□□□□□ -0.18
TRAPPC12-213ENST00000461577 COL24A1Q17RW2 1714 aa13.9□□□□□ -0.18
TRAPPC12-213ENST00000461577 RFC4P35249 363 aa13.89□□□□□ -0.19
TRAPPC12-213ENST00000461577 INTS5Q6P9B9 1019 aaKnown RBP13.89□□□□□ -0.19
TRAPPC12-213ENST00000461577 ARHGEF1Q92888 912 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms