RNA–Protein interactions for RNA: ENST00000461379.5

GAPVD1-210, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 4

Gene GAPVD1, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-210ENST00000461379 NEUROD2Q15784 382 aa21.15■□□□□ 0.98
GAPVD1-210ENST00000461379 FAM9BQ8IZU0 186 aa21.15■□□□□ 0.98
GAPVD1-210ENST00000461379 APAF1O14727 1248 aa21.14■□□□□ 0.97
GAPVD1-210ENST00000461379 KCNQ4P56696 695 aa21.14■□□□□ 0.97
GAPVD1-210ENST00000461379 LRRC4BQ9NT99 713 aa21.14■□□□□ 0.97
GAPVD1-210ENST00000461379 BTAF1O14981 1849 aa21.13■□□□□ 0.97
GAPVD1-210ENST00000461379 SLC27A3Q5K4L6 730 aa21.13■□□□□ 0.97
GAPVD1-210ENST00000461379 CCNL1Q9UK58 526 aaPredicted RBP21.13■□□□□ 0.97
GAPVD1-210ENST00000461379 MRC1P22897 1456 aa21.13■□□□□ 0.97
GAPVD1-210ENST00000461379 THUMPD2Q9BTF0 503 aaKnown RBP21.12■□□□□ 0.97
GAPVD1-210ENST00000461379 LOC102724428A0A0B4J2F2 783 aa21.11■□□□□ 0.97
GAPVD1-210ENST00000461379 SIK1P57059 783 aa21.11■□□□□ 0.97
GAPVD1-210ENST00000461379 LMOD3Q0VAK6 560 aa21.11■□□□□ 0.97
GAPVD1-210ENST00000461379 SLC39A6Q13433 755 aa21.11■□□□□ 0.97
GAPVD1-210ENST00000461379 ADAMTS7Q9UKP4 1686 aa21.11■□□□□ 0.97
GAPVD1-210ENST00000461379 RBM42Q9BTD8 480 aaKnown RBP21.1■□□□□ 0.97
GAPVD1-210ENST00000461379 PTCD1O75127 700 aaKnown RBP21.09■□□□□ 0.97
GAPVD1-210ENST00000461379 NBPF14Q5TI25 921 aa21.09■□□□□ 0.97
GAPVD1-210ENST00000461379 TRIM35Q9UPQ4 493 aa21.09■□□□□ 0.97
GAPVD1-210ENST00000461379 BTBD11A6QL63 1104 aa21.08■□□□□ 0.97
GAPVD1-210ENST00000461379 TAF7Q15545 349 aaPredicted RBP21.08■□□□□ 0.97
GAPVD1-210ENST00000461379 SLC4A9Q96Q91 983 aa21.08■□□□□ 0.97
GAPVD1-210ENST00000461379 ITGB4P16144 1822 aa21.07■□□□□ 0.96
GAPVD1-210ENST00000461379 SENP3-EIF4A1A0A087X0R7 540 aa21.07■□□□□ 0.96
GAPVD1-210ENST00000461379 ATP6V1AP38606 617 aa21.07■□□□□ 0.96
GAPVD1-210ENST00000461379 ANO8Q9HCE9 1232 aaPredicted RBP21.07■□□□□ 0.96
GAPVD1-210ENST00000461379 RGPD3A6NKT7 1758 aaPredicted RBP21.07■□□□□ 0.96
GAPVD1-210ENST00000461379 RGPD4Q7Z3J3 1758 aa21.07■□□□□ 0.96
GAPVD1-210ENST00000461379 SCN11AQ9UI33 1791 aa21.07■□□□□ 0.96
GAPVD1-210ENST00000461379 ITPK1Q13572 414 aa21.06■□□□□ 0.96
GAPVD1-210ENST00000461379 ZNF790Q6PG37 636 aa21.06■□□□□ 0.96
GAPVD1-210ENST00000461379 TTC5Q8N0Z6 440 aa21.06■□□□□ 0.96
GAPVD1-210ENST00000461379 KAT6BQ8WYB5 2073 aa21.06■□□□□ 0.96
GAPVD1-210ENST00000461379 KCNQ3O43525 872 aa21.05■□□□□ 0.96
GAPVD1-210ENST00000461379 MIS18AQ9NYP9 233 aa21.05■□□□□ 0.96
GAPVD1-210ENST00000461379 R3HDM1Q15032 1099 aaKnown RBP21.04■□□□□ 0.96
GAPVD1-210ENST00000461379 STK32BQ9NY57 414 aa21.04■□□□□ 0.96
GAPVD1-210ENST00000461379 RREB1Q92766 1687 aa21.04■□□□□ 0.96
GAPVD1-210ENST00000461379 SLC15A2Q16348 729 aa21.03■□□□□ 0.96
GAPVD1-210ENST00000461379 ZNF827Q17R98 1081 aa21.03■□□□□ 0.96
GAPVD1-210ENST00000461379 LINC00116Q8NCU8 138 aa21.03■□□□□ 0.96
GAPVD1-210ENST00000461379 PSDA5PKW4 1024 aaPredicted RBP21.02■□□□□ 0.96
GAPVD1-210ENST00000461379 HMGB2P26583 209 aaKnown RBP21.02■□□□□ 0.96
GAPVD1-210ENST00000461379 AKT1S1Q96B36 256 aa21.02■□□□□ 0.96
GAPVD1-210ENST00000461379 ZNF496Q96IT1 587 aaPredicted RBP21.02■□□□□ 0.96
GAPVD1-210ENST00000461379 FMNL2Q96PY5 1086 aa21■□□□□ 0.95
GAPVD1-210ENST00000461379 LY75O60449 1722 aa21■□□□□ 0.95
GAPVD1-210ENST00000461379 NUP188Q5SRE5 1749 aa21■□□□□ 0.95
GAPVD1-210ENST00000461379 KCPQ6ZWJ8 1503 aa20.99■□□□□ 0.95
GAPVD1-210ENST00000461379 CCDC27Q2M243 656 aa20.99■□□□□ 0.95
GAPVD1-210ENST00000461379 NCBP3Q53F19 620 aaKnown RBP20.99■□□□□ 0.95
GAPVD1-210ENST00000461379 DNAJC10Q8IXB1 793 aa20.99■□□□□ 0.95
GAPVD1-210ENST00000461379 VSIG10Q8N0Z9 540 aa20.99■□□□□ 0.95
GAPVD1-210ENST00000461379 TFCP2L1Q9NZI6 479 aa20.98■□□□□ 0.95
GAPVD1-210ENST00000461379 TSPYL4Q9UJ04 414 aa20.98■□□□□ 0.95
GAPVD1-210ENST00000461379 SALL2Q9Y467 1007 aaPredicted RBP20.98■□□□□ 0.95
GAPVD1-210ENST00000461379 HEG1Q9ULI3 1381 aa20.97■□□□□ 0.95
GAPVD1-210ENST00000461379 WWC1Q8IX03 1113 aa20.97■□□□□ 0.95
GAPVD1-210ENST00000461379 BABAM1Q9NWV8 329 aa20.97■□□□□ 0.95
GAPVD1-210ENST00000461379 LAS1LQ9Y4W2 734 aaKnown RBP20.97■□□□□ 0.95
GAPVD1-210ENST00000461379 PAPPAQ13219 1627 aa20.96■□□□□ 0.95
GAPVD1-210ENST00000461379 CHL1O00533 1208 aa20.96■□□□□ 0.95
GAPVD1-210ENST00000461379 CALD1Q05682 793 aaKnown RBP20.96■□□□□ 0.95
GAPVD1-210ENST00000461379 AK7Q96M32 723 aa20.96■□□□□ 0.95
GAPVD1-210ENST00000461379 EIF4A1P60842 406 aaKnown RBP20.95■□□□□ 0.94
GAPVD1-210ENST00000461379 RC3H1Q5TC82 1133 aaKnown RBP20.95■□□□□ 0.94
GAPVD1-210ENST00000461379 CFAP44Q96MT7 982 aa20.95■□□□□ 0.94
GAPVD1-210ENST00000461379 DLG5Q8TDM6 1919 aa20.94■□□□□ 0.94
GAPVD1-210ENST00000461379 CYP19A1P11511 503 aaPredicted RBP20.94■□□□□ 0.94
GAPVD1-210ENST00000461379 CRKLP46109 303 aaKnown RBP20.94■□□□□ 0.94
GAPVD1-210ENST00000461379 TEX13AQ9BXU3 409 aaPredicted RBP20.94■□□□□ 0.94
GAPVD1-210ENST00000461379 SIPA1L3O60292 1781 aaPredicted RBP20.94■□□□□ 0.94
GAPVD1-210ENST00000461379 GNPATO15228 680 aa20.93■□□□□ 0.94
GAPVD1-210ENST00000461379 SNRPA1P09661 255 aaKnown RBP20.93■□□□□ 0.94
GAPVD1-210ENST00000461379 ZNF853P0CG23 659 aa20.93■□□□□ 0.94
GAPVD1-210ENST00000461379 NGEFQ8N5V2 710 aa20.93■□□□□ 0.94
GAPVD1-210ENST00000461379 PDGFDQ9GZP0 370 aaPredicted RBP20.93■□□□□ 0.94
GAPVD1-210ENST00000461379 CNTNAP4Q9C0A0 1308 aa20.93■□□□□ 0.94
GAPVD1-210ENST00000461379 PRAMEF22A3QJZ6 481 aa20.92■□□□□ 0.94
GAPVD1-210ENST00000461379 STARD3NLO95772 234 aa20.92■□□□□ 0.94
GAPVD1-210ENST00000461379 INTS5Q6P9B9 1019 aaKnown RBP20.92■□□□□ 0.94
GAPVD1-210ENST00000461379 SMIM5Q71RC9 77 aa20.92■□□□□ 0.94
GAPVD1-210ENST00000461379 AMIGO3Q86WK7 504 aa20.92■□□□□ 0.94
GAPVD1-210ENST00000461379 IFT57Q9NWB7 429 aa20.92■□□□□ 0.94
GAPVD1-210ENST00000461379 PNPLA7Q6ZV29 1317 aa20.92■□□□□ 0.94
GAPVD1-210ENST00000461379 GNAI1P63096 354 aa20.91■□□□□ 0.94
GAPVD1-210ENST00000461379 CCDC87Q9NVE4 849 aa20.91■□□□□ 0.94
GAPVD1-210ENST00000461379 USP16Q9Y5T5 823 aa20.91■□□□□ 0.94
GAPVD1-210ENST00000461379 GIGYF1O75420 1035 aaPredicted RBP20.9■□□□□ 0.94
GAPVD1-210ENST00000461379 MBIPQ9NS73 344 aa20.9■□□□□ 0.94
GAPVD1-210ENST00000461379 RTCBQ9Y3I0 505 aaKnown RBP20.9■□□□□ 0.94
GAPVD1-210ENST00000461379 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.89■□□□□ 0.93
GAPVD1-210ENST00000461379 RPS6KA4O75676 772 aa20.89■□□□□ 0.93
GAPVD1-210ENST00000461379 PHF14O94880 888 aa20.89■□□□□ 0.93
GAPVD1-210ENST00000461379 COL23A1Q86Y22 540 aaPredicted RBP20.89■□□□□ 0.93
GAPVD1-210ENST00000461379 WDR63Q8IWG1 891 aa20.89■□□□□ 0.93
GAPVD1-210ENST00000461379 FLAD1Q8NFF5 587 aa20.89■□□□□ 0.93
GAPVD1-210ENST00000461379 VIRMAQ69YN4 1812 aaKnown RBP20.89■□□□□ 0.93
GAPVD1-210ENST00000461379 C4BP0C0L5 1744 aa20.89■□□□□ 0.93
GAPVD1-210ENST00000461379 C5P01031 1676 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms