RNA–Protein interactions for RNA: ENST00000461289.2

CHL1-209, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 2

Gene CHL1, Length 462 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-209ENST00000461289 KLF16Q9BXK1 252 aaPredicted RBP11.2□□□□□ -0.62
CHL1-209ENST00000461289 PODXL2Q9NZ53 605 aa11.2□□□□□ -0.62
CHL1-209ENST00000461289 PTGIRP43119 386 aa11.19□□□□□ -0.62
CHL1-209ENST00000461289 Q6ZVU0 165 aa11.19□□□□□ -0.62
CHL1-209ENST00000461289 TNS4Q8IZW8 715 aa11.19□□□□□ -0.62
CHL1-209ENST00000461289 A0A1W2PRU2 124 aa11.18□□□□□ -0.62
CHL1-209ENST00000461289 CAPN5O15484 640 aaPredicted RBP11.18□□□□□ -0.62
CHL1-209ENST00000461289 TLR1Q15399 786 aa11.18□□□□□ -0.62
CHL1-209ENST00000461289 CNKSR1Q969H4 720 aa11.18□□□□□ -0.62
CHL1-209ENST00000461289 MTMR7Q9Y216 660 aa11.18□□□□□ -0.62
CHL1-209ENST00000461289 SSFA2P28290 1259 aa11.17□□□□□ -0.62
CHL1-209ENST00000461289 GTF2E1P29083 439 aaPredicted RBP11.17□□□□□ -0.62
CHL1-209ENST00000461289 ZNF395Q9H8N7 513 aaPredicted RBP11.17□□□□□ -0.62
CHL1-209ENST00000461289 CLN3Q13286 438 aa11.16□□□□□ -0.62
CHL1-209ENST00000461289 MEIOBQ8N635 442 aa11.16□□□□□ -0.62
CHL1-209ENST00000461289 CCER1Q8TC90 406 aaPredicted RBP11.16□□□□□ -0.62
CHL1-209ENST00000461289 SCG3Q8WXD2 468 aaKnown RBP11.16□□□□□ -0.62
CHL1-209ENST00000461289 VTI1AQ96AJ9 217 aa11.16□□□□□ -0.62
CHL1-209ENST00000461289 ESYT1Q9BSJ8 1104 aa11.16□□□□□ -0.62
CHL1-209ENST00000461289 TSEN34Q9BSV6 310 aaKnown RBP11.16□□□□□ -0.62
CHL1-209ENST00000461289 IL2RAP01589 272 aa11.15□□□□□ -0.62
CHL1-209ENST00000461289 SMTNP53814 917 aa11.15□□□□□ -0.62
CHL1-209ENST00000461289 XAGE2Q96GT9 111 aa11.15□□□□□ -0.62
CHL1-209ENST00000461289 CXXC1Q9P0U4 656 aaPredicted RBP11.15□□□□□ -0.62
CHL1-209ENST00000461289 SLAIN2Q9P270 581 aa11.15□□□□□ -0.62
CHL1-209ENST00000461289 CHMP3Q9Y3E7 222 aa11.15□□□□□ -0.62
CHL1-209ENST00000461289 A6NJY4 79 aa11.14□□□□□ -0.63
CHL1-209ENST00000461289 ARID4AP29374 1257 aaPredicted RBP11.14□□□□□ -0.63
CHL1-209ENST00000461289 CHMP7Q8WUX9 453 aaPredicted RBP11.14□□□□□ -0.63
CHL1-209ENST00000461289 SLC4A9Q96Q91 983 aa11.14□□□□□ -0.63
CHL1-209ENST00000461289 IVNS1ABPQ9Y6Y0 642 aa11.14□□□□□ -0.63
CHL1-209ENST00000461289 PKDCCQ504Y2 493 aa11.13□□□□□ -0.63
CHL1-209ENST00000461289 Q6ZNB5 142 aa11.13□□□□□ -0.63
CHL1-209ENST00000461289 NBPF15Q8N660 670 aa11.13□□□□□ -0.63
CHL1-209ENST00000461289 GZF1Q9H116 711 aaPredicted RBP11.13□□□□□ -0.63
CHL1-209ENST00000461289 TSPAN10Q9H1Z9 355 aaPredicted RBP11.13□□□□□ -0.63
CHL1-209ENST00000461289 PPP1R12BO60237 982 aaPredicted RBP11.12□□□□□ -0.63
CHL1-209ENST00000461289 GFRA3O60609 400 aa11.12□□□□□ -0.63
CHL1-209ENST00000461289 IGFBP4P22692 258 aa11.12□□□□□ -0.63
CHL1-209ENST00000461289 WEE1P30291 646 aa11.12□□□□□ -0.63
CHL1-209ENST00000461289 OCLNQ16625 522 aa11.12□□□□□ -0.63
CHL1-209ENST00000461289 SLC9A9Q8IVB4 645 aa11.12□□□□□ -0.63
CHL1-209ENST00000461289 LINC00528Q8N1L1 170 aa11.12□□□□□ -0.63
CHL1-209ENST00000461289 KDF1Q8NAX2 398 aaPredicted RBP11.12□□□□□ -0.63
CHL1-209ENST00000461289 MKNK1Q9BUB5 465 aa11.12□□□□□ -0.63
CHL1-209ENST00000461289 POLMQ9NP87 494 aaPredicted RBP11.12□□□□□ -0.63
CHL1-209ENST00000461289 SCHIP1Q9P0W5 487 aaPredicted RBP11.12□□□□□ -0.63
CHL1-209ENST00000461289 BMP2P12643 396 aa11.11□□□□□ -0.63
CHL1-209ENST00000461289 CENPCQ03188 943 aa11.11□□□□□ -0.63
CHL1-209ENST00000461289 SLC27A3Q5K4L6 730 aa11.11□□□□□ -0.63
CHL1-209ENST00000461289 TBCELQ5QJ74 424 aa11.11□□□□□ -0.63
CHL1-209ENST00000461289 PHLDB3Q6NSJ2 640 aa11.11□□□□□ -0.63
CHL1-209ENST00000461289 TMEM214Q6NUQ4 689 aaKnown RBP11.11□□□□□ -0.63
CHL1-209ENST00000461289 ATAD2Q6PL18 1390 aa11.11□□□□□ -0.63
CHL1-209ENST00000461289 SCARF1Q14162 830 aa11.1□□□□□ -0.63
CHL1-209ENST00000461289 C6orf118Q5T5N4 469 aa11.1□□□□□ -0.63
CHL1-209ENST00000461289 GAS2L2Q8NHY3 880 aa11.1□□□□□ -0.63
CHL1-209ENST00000461289 C1orf216Q8TAB5 229 aa11.1□□□□□ -0.63
CHL1-209ENST00000461289 ZSCAN10Q96SZ4 725 aaPredicted RBP11.1□□□□□ -0.63
CHL1-209ENST00000461289 INSM2Q96T92 566 aaPredicted RBP11.1□□□□□ -0.63
CHL1-209ENST00000461289 FOXO3O43524 673 aa11.09□□□□□ -0.63
CHL1-209ENST00000461289 EPHA4P54764 986 aa11.09□□□□□ -0.63
CHL1-209ENST00000461289 NRG2O14511 850 aaPredicted RBP11.08□□□□□ -0.64
CHL1-209ENST00000461289 CDK2AP1O14519 115 aa11.08□□□□□ -0.64
CHL1-209ENST00000461289 DGAT1O75907 488 aa11.08□□□□□ -0.64
CHL1-209ENST00000461289 PSMA6P60900 246 aaKnown RBP11.08□□□□□ -0.64
CHL1-209ENST00000461289 FKBP5Q13451 457 aaPredicted RBP11.08□□□□□ -0.64
CHL1-209ENST00000461289 MTFR1Q15390 333 aa11.08□□□□□ -0.64
CHL1-209ENST00000461289 GNASQ5JWF2 1037 aa11.08□□□□□ -0.64
CHL1-209ENST00000461289 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.08□□□□□ -0.64
CHL1-209ENST00000461289 CABP1Q9NZU7 370 aa11.08□□□□□ -0.64
CHL1-209ENST00000461289 ZNF232Q9UNY5 417 aa11.08□□□□□ -0.64
CHL1-209ENST00000461289 GNEQ9Y223 722 aaKnown RBP11.08□□□□□ -0.64
CHL1-209ENST00000461289 PTCD1O75127 700 aaKnown RBP11.07□□□□□ -0.64
CHL1-209ENST00000461289 ABL1P00519 1130 aa11.07□□□□□ -0.64
CHL1-209ENST00000461289 MRPL14Q6P1L8 145 aaKnown RBP11.07□□□□□ -0.64
CHL1-209ENST00000461289 TAS1R3Q7RTX0 852 aa11.07□□□□□ -0.64
CHL1-209ENST00000461289 SPINT1O43278 529 aa11.06□□□□□ -0.64
CHL1-209ENST00000461289 SCNN1AP37088 669 aa11.06□□□□□ -0.64
CHL1-209ENST00000461289 FOXK2Q01167 660 aa11.06□□□□□ -0.64
CHL1-209ENST00000461289 CTC1Q2NKJ3 1217 aa11.06□□□□□ -0.64
CHL1-209ENST00000461289 TMCO4Q5TGY1 634 aa11.06□□□□□ -0.64
CHL1-209ENST00000461289 HRH3Q9Y5N1 445 aa11.06□□□□□ -0.64
CHL1-209ENST00000461289 AXIN1O15169 862 aa11.05□□□□□ -0.64
CHL1-209ENST00000461289 AVPP01185 164 aa11.05□□□□□ -0.64
CHL1-209ENST00000461289 GPC1P35052 558 aa11.05□□□□□ -0.64
CHL1-209ENST00000461289 LAPTM4AQ15012 233 aa11.05□□□□□ -0.64
CHL1-209ENST00000461289 TXNDC2Q86VQ3 553 aa11.05□□□□□ -0.64
CHL1-209ENST00000461289 PURBQ96QR8 312 aaKnown RBP11.05□□□□□ -0.64
CHL1-209ENST00000461289 NIFKQ9BYG3 293 aaKnown RBP11.05□□□□□ -0.64
CHL1-209ENST00000461289 FHDC1Q9C0D6 1143 aaPredicted RBP11.05□□□□□ -0.64
CHL1-209ENST00000461289 CCDC9Q9Y3X0 531 aaKnown RBP11.05□□□□□ -0.64
CHL1-209ENST00000461289 SERTM1A2A2V5 107 aa11.04□□□□□ -0.64
CHL1-209ENST00000461289 C21orf2O43822 256 aa11.04□□□□□ -0.64
CHL1-209ENST00000461289 BMP1P13497 986 aa11.04□□□□□ -0.64
CHL1-209ENST00000461289 SERPINB4P48594 390 aa11.04□□□□□ -0.64
CHL1-209ENST00000461289 RNF144AP50876 292 aaPredicted RBP11.03□□□□□ -0.64
CHL1-209ENST00000461289 PPARGC1BQ86YN6 1023 aaKnown RBP11.03□□□□□ -0.64
CHL1-209ENST00000461289 RHBDD1Q8TEB9 315 aa11.03□□□□□ -0.64
CHL1-209ENST00000461289 USP3Q9Y6I4 520 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms