RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 GAS2L2Q8NHY3 880 aa19.03■□□□□ 0.64
COL5A3-202ENST00000461214 MAP3K5Q99683 1374 aa19.02■□□□□ 0.64
COL5A3-202ENST00000461214 CCDC146Q8IYE0 955 aa19.01■□□□□ 0.63
COL5A3-202ENST00000461214 UBR2Q8IWV8 1755 aa19.01■□□□□ 0.63
COL5A3-202ENST00000461214 BTAF1O14981 1849 aa19■□□□□ 0.63
COL5A3-202ENST00000461214 NCBP3Q53F19 620 aaKnown RBP19■□□□□ 0.63
COL5A3-202ENST00000461214 NGEFQ8N5V2 710 aa19■□□□□ 0.63
COL5A3-202ENST00000461214 ZCRB1Q8TBF4 217 aaKnown RBP19■□□□□ 0.63
COL5A3-202ENST00000461214 NFE2L2Q16236 605 aa18.99■□□□□ 0.63
COL5A3-202ENST00000461214 PHACTR3Q96KR7 559 aa18.99■□□□□ 0.63
COL5A3-202ENST00000461214 BCL9O00512 1426 aa18.99■□□□□ 0.63
COL5A3-202ENST00000461214 MTHFSDQ2M296 383 aaKnown RBP18.98■□□□□ 0.63
COL5A3-202ENST00000461214 ZNF530Q6P9A1 599 aaPredicted RBP18.98■□□□□ 0.63
COL5A3-202ENST00000461214 EXOC5O00471 708 aa18.97■□□□□ 0.63
COL5A3-202ENST00000461214 LMOD3Q0VAK6 560 aa18.97■□□□□ 0.63
COL5A3-202ENST00000461214 C1orf141Q5JVX7 400 aa18.97■□□□□ 0.63
COL5A3-202ENST00000461214 ACSBG1Q96GR2 724 aa18.97■□□□□ 0.63
COL5A3-202ENST00000461214 CEP350Q5VT06 3117 aa18.97■□□□□ 0.63
COL5A3-202ENST00000461214 TMPOP42166 694 aaKnown RBP18.96■□□□□ 0.63
COL5A3-202ENST00000461214 AKAP4Q5JQC9 854 aa18.96■□□□□ 0.63
COL5A3-202ENST00000461214 IFNL2Q8IZJ0 200 aa18.96■□□□□ 0.63
COL5A3-202ENST00000461214 KDM6AO15550 1401 aaPredicted RBP18.96■□□□□ 0.63
COL5A3-202ENST00000461214 APAF1O14727 1248 aa18.95■□□□□ 0.62
COL5A3-202ENST00000461214 HSP90AB1P08238 724 aaKnown RBP18.95■□□□□ 0.62
COL5A3-202ENST00000461214 PHKG2P15735 406 aa18.95■□□□□ 0.62
COL5A3-202ENST00000461214 CICQ96RK0 1608 aaPredicted RBP18.95■□□□□ 0.62
COL5A3-202ENST00000461214 ZNF831Q5JPB2 1677 aa18.95■□□□□ 0.62
COL5A3-202ENST00000461214 LY75O60449 1722 aa18.94■□□□□ 0.62
COL5A3-202ENST00000461214 LAMB4A4D0S4 1761 aa18.94■□□□□ 0.62
COL5A3-202ENST00000461214 CYP27B1O15528 508 aa18.94■□□□□ 0.62
COL5A3-202ENST00000461214 HTATSF1O43719 755 aaKnown RBP18.94■□□□□ 0.62
COL5A3-202ENST00000461214 POLD1P28340 1107 aa18.94■□□□□ 0.62
COL5A3-202ENST00000461214 ZNF827Q17R98 1081 aa18.94■□□□□ 0.62
COL5A3-202ENST00000461214 NLGN2Q8NFZ4 835 aa18.94■□□□□ 0.62
COL5A3-202ENST00000461214 CEMIPQ8WUJ3 1361 aa18.93■□□□□ 0.62
COL5A3-202ENST00000461214 GNAT3A8MTJ3 354 aa18.93■□□□□ 0.62
COL5A3-202ENST00000461214 NKX1-1Q15270 411 aaPredicted RBP18.93■□□□□ 0.62
COL5A3-202ENST00000461214 CCDC27Q2M243 656 aa18.93■□□□□ 0.62
COL5A3-202ENST00000461214 RIPK4P57078 832 aa18.91■□□□□ 0.62
COL5A3-202ENST00000461214 ZNF526Q8TF50 670 aaPredicted RBP18.91■□□□□ 0.62
COL5A3-202ENST00000461214 DCAF5Q96JK2 942 aa18.91■□□□□ 0.62
COL5A3-202ENST00000461214 ATP10DQ9P241 1426 aa18.91■□□□□ 0.62
COL5A3-202ENST00000461214 YBX3P16989 372 aaKnown RBP eCLIP18.9■□□□□ 0.62
COL5A3-202ENST00000461214 HSPA6P17066 643 aa18.9■□□□□ 0.62
COL5A3-202ENST00000461214 RTF1Q92541 710 aaKnown RBP18.9■□□□□ 0.62
COL5A3-202ENST00000461214 DDX54Q8TDD1 881 aaKnown RBP18.89■□□□□ 0.61
COL5A3-202ENST00000461214 GPBP1L1Q9HC44 474 aaPredicted RBP18.89■□□□□ 0.61
COL5A3-202ENST00000461214 TAF1LQ8IZX4 1826 aa18.88■□□□□ 0.61
COL5A3-202ENST00000461214 RRP7AQ9Y3A4 280 aaKnown RBP18.88■□□□□ 0.61
COL5A3-202ENST00000461214 CACNA1FO60840 1977 aa18.88■□□□□ 0.61
COL5A3-202ENST00000461214 GRIN3BO60391 1043 aa18.87■□□□□ 0.61
COL5A3-202ENST00000461214 C5P01031 1676 aa18.87■□□□□ 0.61
COL5A3-202ENST00000461214 HNRNPUQ00839 825 aaKnown RBP eCLIP18.87■□□□□ 0.61
COL5A3-202ENST00000461214 CALD1Q05682 793 aaKnown RBP18.87■□□□□ 0.61
COL5A3-202ENST00000461214 ZBED9Q6R2W3 1325 aa18.87■□□□□ 0.61
COL5A3-202ENST00000461214 LRRC4BQ9NT99 713 aa18.87■□□□□ 0.61
COL5A3-202ENST00000461214 TRIM35Q9UPQ4 493 aa18.87■□□□□ 0.61
COL5A3-202ENST00000461214 COL5A3P25940 1745 aaPredicted RBP18.86■□□□□ 0.61
COL5A3-202ENST00000461214 ZNF521Q96K83 1311 aa18.86■□□□□ 0.61
COL5A3-202ENST00000461214 NEUROD2Q15784 382 aa18.86■□□□□ 0.61
COL5A3-202ENST00000461214 RNMTO43148 476 aaKnown RBP18.85■□□□□ 0.61
COL5A3-202ENST00000461214 TJP1Q07157 1748 aa18.85■□□□□ 0.61
COL5A3-202ENST00000461214 ERVV-2B6SEH9 535 aa18.84■□□□□ 0.61
COL5A3-202ENST00000461214 MPRIPQ6WCQ1 1025 aa18.84■□□□□ 0.61
COL5A3-202ENST00000461214 WWC1Q8IX03 1113 aa18.84■□□□□ 0.61
COL5A3-202ENST00000461214 SLC16A10Q8TF71 515 aa18.84■□□□□ 0.61
COL5A3-202ENST00000461214 IL16Q14005 1332 aa18.83■□□□□ 0.61
COL5A3-202ENST00000461214 PNPLA7Q6ZV29 1317 aa18.83■□□□□ 0.61
COL5A3-202ENST00000461214 MCM10Q7L590 875 aa18.83■□□□□ 0.6
COL5A3-202ENST00000461214 IL17REQ8NFR9 667 aa18.83■□□□□ 0.6
COL5A3-202ENST00000461214 AKT1S1Q96B36 256 aa18.83■□□□□ 0.6
COL5A3-202ENST00000461214 TEFQ10587 303 aa18.82■□□□□ 0.6
COL5A3-202ENST00000461214 WDR63Q8IWG1 891 aa18.82■□□□□ 0.6
COL5A3-202ENST00000461214 TFCP2L1Q9NZI6 479 aa18.82■□□□□ 0.6
COL5A3-202ENST00000461214 KCPQ6ZWJ8 1503 aa18.81■□□□□ 0.6
COL5A3-202ENST00000461214 KCNQ4P56696 695 aa18.81■□□□□ 0.6
COL5A3-202ENST00000461214 SLC52A2Q9HAB3 445 aa18.81■□□□□ 0.6
COL5A3-202ENST00000461214 MSH5O43196 834 aa18.8■□□□□ 0.6
COL5A3-202ENST00000461214 DCTN1Q14203 1278 aa18.8■□□□□ 0.6
COL5A3-202ENST00000461214 LGR6Q9HBX8 967 aa18.8■□□□□ 0.6
COL5A3-202ENST00000461214 CAPN15O75808 1086 aa18.79■□□□□ 0.6
COL5A3-202ENST00000461214 BABAM1Q9NWV8 329 aa18.79■□□□□ 0.6
COL5A3-202ENST00000461214 TMOD3Q9NYL9 352 aa18.79■□□□□ 0.6
COL5A3-202ENST00000461214 GOLGB1Q14789 3259 aaKnown RBP18.78■□□□□ 0.6
COL5A3-202ENST00000461214 CABP4P57796 275 aa18.78■□□□□ 0.6
COL5A3-202ENST00000461214 THUMPD2Q9BTF0 503 aaKnown RBP18.78■□□□□ 0.6
COL5A3-202ENST00000461214 IFT57Q9NWB7 429 aa18.78■□□□□ 0.6
COL5A3-202ENST00000461214 SALL2Q9Y467 1007 aaPredicted RBP18.77■□□□□ 0.6
COL5A3-202ENST00000461214 GNAI1P63096 354 aa18.76■□□□□ 0.59
COL5A3-202ENST00000461214 GOLGA2Q08379 1002 aa18.76■□□□□ 0.59
COL5A3-202ENST00000461214 MSL1Q68DK7 614 aa18.76■□□□□ 0.59
COL5A3-202ENST00000461214 CFAP44Q96MT7 982 aa18.76■□□□□ 0.59
COL5A3-202ENST00000461214 TAF7Q15545 349 aaPredicted RBP18.75■□□□□ 0.59
COL5A3-202ENST00000461214 SLC27A3Q5K4L6 730 aa18.75■□□□□ 0.59
COL5A3-202ENST00000461214 ZNF853P0CG23 659 aa18.74■□□□□ 0.59
COL5A3-202ENST00000461214 PRIM1P49642 420 aaKnown RBP18.74■□□□□ 0.59
COL5A3-202ENST00000461214 NFATC2IPQ8NCF5 419 aa18.74■□□□□ 0.59
COL5A3-202ENST00000461214 WWC3Q9ULE0 1092 aa18.74■□□□□ 0.59
COL5A3-202ENST00000461214 TUBGCP6Q96RT7 1819 aa18.74■□□□□ 0.59
COL5A3-202ENST00000461214 COL24A1Q17RW2 1714 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms