RNA–Protein interactions for RNA: ENST00000460957.1

GGA1-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2

Gene GGA1, Length 790 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-216ENST00000460957 ATG3Q9NT62 314 aa21.18■□□□□ 0.98
GGA1-216ENST00000460957 RNMTO43148 476 aaKnown RBP21.17■□□□□ 0.98
GGA1-216ENST00000460957 FCHSD2O94868 740 aa21.17■□□□□ 0.98
GGA1-216ENST00000460957 PDGFDQ9GZP0 370 aaPredicted RBP21.17■□□□□ 0.98
GGA1-216ENST00000460957 RSPH6AQ9H0K4 717 aa21.17■□□□□ 0.98
GGA1-216ENST00000460957 ATF5Q9Y2D1 282 aaPredicted RBP21.17■□□□□ 0.98
GGA1-216ENST00000460957 MYBBP1AQ9BQG0 1328 aaKnown RBP21.17■□□□□ 0.98
GGA1-216ENST00000460957 TAF1LQ8IZX4 1826 aa21.16■□□□□ 0.98
GGA1-216ENST00000460957 MAP3K5Q99683 1374 aa21.16■□□□□ 0.98
GGA1-216ENST00000460957 ZNF316A6NFI3 1004 aaPredicted RBP21.16■□□□□ 0.98
GGA1-216ENST00000460957 GNAT3A8MTJ3 354 aa21.16■□□□□ 0.98
GGA1-216ENST00000460957 MTFR1LQ9H019 292 aa21.15■□□□□ 0.98
GGA1-216ENST00000460957 PNNQ9H307 717 aaKnown RBP21.15■□□□□ 0.98
GGA1-216ENST00000460957 SLC52A2Q9HAB3 445 aa21.15■□□□□ 0.98
GGA1-216ENST00000460957 LGR6Q9HBX8 967 aa21.15■□□□□ 0.98
GGA1-216ENST00000460957 QSER1Q2KHR3 1735 aa21.15■□□□□ 0.98
GGA1-216ENST00000460957 TEFQ10587 303 aa21.14■□□□□ 0.97
GGA1-216ENST00000460957 RTF1Q92541 710 aaKnown RBP21.14■□□□□ 0.97
GGA1-216ENST00000460957 C4BP0C0L5 1744 aa21.13■□□□□ 0.97
GGA1-216ENST00000460957 PTCD1O75127 700 aaKnown RBP21.13■□□□□ 0.97
GGA1-216ENST00000460957 TUBGCP6Q96RT7 1819 aa21.13■□□□□ 0.97
GGA1-216ENST00000460957 PNPLA7Q6ZV29 1317 aa21.12■□□□□ 0.97
GGA1-216ENST00000460957 FLAD1Q8NFF5 587 aa21.12■□□□□ 0.97
GGA1-216ENST00000460957 SLC16A10Q8TF71 515 aa21.12■□□□□ 0.97
GGA1-216ENST00000460957 MAPK8IP3Q9UPT6 1336 aa21.11■□□□□ 0.97
GGA1-216ENST00000460957 PHACTR3Q96KR7 559 aa21.11■□□□□ 0.97
GGA1-216ENST00000460957 PHF14O94880 888 aa21.1■□□□□ 0.97
GGA1-216ENST00000460957 POLD1P28340 1107 aa21.1■□□□□ 0.97
GGA1-216ENST00000460957 TTC5Q8N0Z6 440 aa21.1■□□□□ 0.97
GGA1-216ENST00000460957 LINC00116Q8NCU8 138 aa21.1■□□□□ 0.97
GGA1-216ENST00000460957 GNPATO15228 680 aa21.09■□□□□ 0.97
GGA1-216ENST00000460957 ITPK1Q13572 414 aa21.08■□□□□ 0.97
GGA1-216ENST00000460957 WDR43Q15061 677 aaKnown RBP eCLIP21.08■□□□□ 0.97
GGA1-216ENST00000460957 MRC1P22897 1456 aa21.07■□□□□ 0.96
GGA1-216ENST00000460957 SLC39A6Q13433 755 aa21.07■□□□□ 0.96
GGA1-216ENST00000460957 COL23A1Q86Y22 540 aaPredicted RBP21.07■□□□□ 0.96
GGA1-216ENST00000460957 PRKRIP1Q9H875 184 aaPredicted RBP21.07■□□□□ 0.96
GGA1-216ENST00000460957 ADAMTS7Q9UKP4 1686 aa21.05■□□□□ 0.96
GGA1-216ENST00000460957 IL17REQ8NFR9 667 aa21.05■□□□□ 0.96
GGA1-216ENST00000460957 RTCBQ9Y3I0 505 aaKnown RBP21.05■□□□□ 0.96
GGA1-216ENST00000460957 ZNF831Q5JPB2 1677 aa21.05■□□□□ 0.96
GGA1-216ENST00000460957 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.04■□□□□ 0.96
GGA1-216ENST00000460957 SSFA2P28290 1259 aa21.04■□□□□ 0.96
GGA1-216ENST00000460957 KLHL34Q8N239 644 aa21.04■□□□□ 0.96
GGA1-216ENST00000460957 UBR3Q6ZT12 1888 aa21.04■□□□□ 0.96
GGA1-216ENST00000460957 DCAF8L1A6NGE4 600 aa21.03■□□□□ 0.96
GGA1-216ENST00000460957 PTGER2P43116 358 aa21.03■□□□□ 0.96
GGA1-216ENST00000460957 ARXQ96QS3 562 aa21.03■□□□□ 0.96
GGA1-216ENST00000460957 BTBD11A6QL63 1104 aa21.02■□□□□ 0.96
GGA1-216ENST00000460957 HTATSF1O43719 755 aaKnown RBP21.02■□□□□ 0.96
GGA1-216ENST00000460957 TRAPPC3LQ5T215 181 aa21.02■□□□□ 0.96
GGA1-216ENST00000460957 MSL1Q68DK7 614 aa21.02■□□□□ 0.96
GGA1-216ENST00000460957 MCM10Q7L590 875 aa21.02■□□□□ 0.96
GGA1-216ENST00000460957 SLC4A9Q96Q91 983 aa21.02■□□□□ 0.96
GGA1-216ENST00000460957 CNTNAP4Q9C0A0 1308 aa21.02■□□□□ 0.95
GGA1-216ENST00000460957 COL5A3P25940 1745 aaPredicted RBP21.01■□□□□ 0.95
GGA1-216ENST00000460957 RC3H1Q5TC82 1133 aaKnown RBP21.01■□□□□ 0.95
GGA1-216ENST00000460957 ANP32CO43423 234 aa21■□□□□ 0.95
GGA1-216ENST00000460957 CRKLP46109 303 aaKnown RBP21■□□□□ 0.95
GGA1-216ENST00000460957 NFE2L2Q16236 605 aa21■□□□□ 0.95
GGA1-216ENST00000460957 DCTN1Q14203 1278 aa20.99■□□□□ 0.95
GGA1-216ENST00000460957 ZNF790Q6PG37 636 aa20.99■□□□□ 0.95
GGA1-216ENST00000460957 SMIM5Q71RC9 77 aa20.99■□□□□ 0.95
GGA1-216ENST00000460957 DNAJC10Q8IXB1 793 aa20.99■□□□□ 0.95
GGA1-216ENST00000460957 PLEKHF1Q96S99 279 aa20.99■□□□□ 0.95
GGA1-216ENST00000460957 CEMIPQ8WUJ3 1361 aa20.98■□□□□ 0.95
GGA1-216ENST00000460957 TJP1Q07157 1748 aa20.98■□□□□ 0.95
GGA1-216ENST00000460957 DLG5Q8TDM6 1919 aa20.98■□□□□ 0.95
GGA1-216ENST00000460957 SIPA1L3O60292 1781 aaPredicted RBP20.98■□□□□ 0.95
GGA1-216ENST00000460957 RPS6KA4O75676 772 aa20.98■□□□□ 0.95
GGA1-216ENST00000460957 RFC4P35249 363 aa20.98■□□□□ 0.95
GGA1-216ENST00000460957 ADRA2BP18089 450 aa20.97■□□□□ 0.95
GGA1-216ENST00000460957 VSIG10Q8N0Z9 540 aa20.97■□□□□ 0.95
GGA1-216ENST00000460957 FMNL2Q96PY5 1086 aa20.97■□□□□ 0.95
GGA1-216ENST00000460957 FHDC1Q9C0D6 1143 aaPredicted RBP20.97■□□□□ 0.95
GGA1-216ENST00000460957 KCPQ6ZWJ8 1503 aa20.96■□□□□ 0.95
GGA1-216ENST00000460957 AMIGO3Q86WK7 504 aa20.96■□□□□ 0.95
GGA1-216ENST00000460957 CCDC146Q8IYE0 955 aa20.96■□□□□ 0.95
GGA1-216ENST00000460957 SGIP1Q9BQI5 828 aa20.96■□□□□ 0.95
GGA1-216ENST00000460957 CCDC87Q9NVE4 849 aa20.96■□□□□ 0.95
GGA1-216ENST00000460957 UBR2Q8IWV8 1755 aa20.95■□□□□ 0.94
GGA1-216ENST00000460957 STARD3NLO95772 234 aa20.95■□□□□ 0.94
GGA1-216ENST00000460957 LMOD3Q0VAK6 560 aa20.95■□□□□ 0.94
GGA1-216ENST00000460957 NPM2Q86SE8 214 aaKnown RBP20.95■□□□□ 0.94
GGA1-216ENST00000460957 TEX13AQ9BXU3 409 aaPredicted RBP20.95■□□□□ 0.94
GGA1-216ENST00000460957 CICQ96RK0 1608 aaPredicted RBP20.94■□□□□ 0.94
GGA1-216ENST00000460957 RIPK4P57078 832 aa20.94■□□□□ 0.94
GGA1-216ENST00000460957 TAF7Q15545 349 aaPredicted RBP20.94■□□□□ 0.94
GGA1-216ENST00000460957 ZNF496Q96IT1 587 aaPredicted RBP20.94■□□□□ 0.94
GGA1-216ENST00000460957 NEUROD2Q15784 382 aa20.93■□□□□ 0.94
GGA1-216ENST00000460957 PNISRQ8TF01 805 aaKnown RBP20.93■□□□□ 0.94
GGA1-216ENST00000460957 ARHGEF1Q92888 912 aaKnown RBP20.93■□□□□ 0.94
GGA1-216ENST00000460957 RUNDC1Q96C34 613 aa20.93■□□□□ 0.94
GGA1-216ENST00000460957 MYH14Q7Z406 1995 aaKnown RBP20.93■□□□□ 0.94
GGA1-216ENST00000460957 HEG1Q9ULI3 1381 aa20.93■□□□□ 0.94
GGA1-216ENST00000460957 CYP19A1P11511 503 aaPredicted RBP20.92■□□□□ 0.94
GGA1-216ENST00000460957 SYT17Q9BSW7 474 aa20.92■□□□□ 0.94
GGA1-216ENST00000460957 ADAMTS8Q9UP79 889 aa20.92■□□□□ 0.94
GGA1-216ENST00000460957 SRCAPQ6ZRS2 3230 aa20.92■□□□□ 0.94
GGA1-216ENST00000460957 COL24A1Q17RW2 1714 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms