RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 GLI3P10071 1580 aa14.42□□□□□ -0.1
SMNDC1-203ENST00000460483 CYP27B1O15528 508 aa14.41□□□□□ -0.1
SMNDC1-203ENST00000460483 NEUROD2Q15784 382 aa14.41□□□□□ -0.1
SMNDC1-203ENST00000460483 PARP4Q9UKK3 1724 aaKnown RBP14.41□□□□□ -0.1
SMNDC1-203ENST00000460483 BCL9O00512 1426 aa14.41□□□□□ -0.1
SMNDC1-203ENST00000460483 RGPD5Q99666 1765 aa14.4□□□□□ -0.1
SMNDC1-203ENST00000460483 CABP4P57796 275 aa14.4□□□□□ -0.1
SMNDC1-203ENST00000460483 SF3B2Q13435 895 aaKnown RBP14.39□□□□□ -0.11
SMNDC1-203ENST00000460483 MARCH10Q8NA82 808 aaPredicted RBP14.39□□□□□ -0.11
SMNDC1-203ENST00000460483 BABAM1Q9NWV8 329 aa14.39□□□□□ -0.11
SMNDC1-203ENST00000460483 TMOD3Q9NYL9 352 aa14.39□□□□□ -0.11
SMNDC1-203ENST00000460483 MPRIPQ6WCQ1 1025 aa14.38□□□□□ -0.11
SMNDC1-203ENST00000460483 CCDC125Q86Z20 511 aa14.38□□□□□ -0.11
SMNDC1-203ENST00000460483 CHMP4AQ9BY43 222 aa14.38□□□□□ -0.11
SMNDC1-203ENST00000460483 RGS12O14924 1447 aa14.38□□□□□ -0.11
SMNDC1-203ENST00000460483 THSD7AQ9UPZ6 1657 aa14.37□□□□□ -0.11
SMNDC1-203ENST00000460483 RNMTO43148 476 aaKnown RBP14.37□□□□□ -0.11
SMNDC1-203ENST00000460483 HNRNPUQ00839 825 aaKnown RBP eCLIP14.37□□□□□ -0.11
SMNDC1-203ENST00000460483 WDR63Q8IWG1 891 aa14.37□□□□□ -0.11
SMNDC1-203ENST00000460483 SYTL4Q96C24 671 aaPredicted RBP14.37□□□□□ -0.11
SMNDC1-203ENST00000460483 TAF7Q15545 349 aaPredicted RBP14.36□□□□□ -0.11
SMNDC1-203ENST00000460483 SMARCC1Q92922 1105 aaPredicted RBP14.36□□□□□ -0.11
SMNDC1-203ENST00000460483 BCL11BQ9C0K0 894 aaPredicted RBP14.36□□□□□ -0.11
SMNDC1-203ENST00000460483 SLC52A2Q9HAB3 445 aa14.36□□□□□ -0.11
SMNDC1-203ENST00000460483 RRP7AQ9Y3A4 280 aaKnown RBP14.36□□□□□ -0.11
SMNDC1-203ENST00000460483 GNAI1P63096 354 aa14.35□□□□□ -0.11
SMNDC1-203ENST00000460483 TTC5Q8N0Z6 440 aa14.35□□□□□ -0.11
SMNDC1-203ENST00000460483 IL16Q14005 1332 aa14.35□□□□□ -0.11
SMNDC1-203ENST00000460483 PRIM1P49642 420 aaKnown RBP14.34□□□□□ -0.11
SMNDC1-203ENST00000460483 WWC1Q8IX03 1113 aa14.34□□□□□ -0.11
SMNDC1-203ENST00000460483 IL17REQ8NFR9 667 aa14.34□□□□□ -0.11
SMNDC1-203ENST00000460483 MYH16Q9H6N6 1097 aa14.34□□□□□ -0.11
SMNDC1-203ENST00000460483 CEMIPQ8WUJ3 1361 aa14.34□□□□□ -0.11
SMNDC1-203ENST00000460483 BTBD11A6QL63 1104 aa14.33□□□□□ -0.12
SMNDC1-203ENST00000460483 GOLGA2Q08379 1002 aa14.33□□□□□ -0.12
SMNDC1-203ENST00000460483 MCM10Q7L590 875 aa14.33□□□□□ -0.12
SMNDC1-203ENST00000460483 NFATC2IPQ8NCF5 419 aa14.33□□□□□ -0.12
SMNDC1-203ENST00000460483 IFT57Q9NWB7 429 aa14.33□□□□□ -0.12
SMNDC1-203ENST00000460483 LRRC37A3O60309 1634 aa14.33□□□□□ -0.12
SMNDC1-203ENST00000460483 PKD1L3Q7Z443 1732 aa14.32□□□□□ -0.12
SMNDC1-203ENST00000460483 CFAP44Q96MT7 982 aa14.32□□□□□ -0.12
SMNDC1-203ENST00000460483 LGR6Q9HBX8 967 aa14.32□□□□□ -0.12
SMNDC1-203ENST00000460483 TRIM35Q9UPQ4 493 aa14.32□□□□□ -0.12
SMNDC1-203ENST00000460483 SALL2Q9Y467 1007 aaPredicted RBP14.32□□□□□ -0.12
SMNDC1-203ENST00000460483 E9PSI1 815 aa14.31□□□□□ -0.12
SMNDC1-203ENST00000460483 GABBR2O75899 941 aa14.31□□□□□ -0.12
SMNDC1-203ENST00000460483 ACSBG1Q96GR2 724 aa14.31□□□□□ -0.12
SMNDC1-203ENST00000460483 RGPD2P0DJD1 1756 aa14.31□□□□□ -0.12
SMNDC1-203ENST00000460483 TSPYL4Q9UJ04 414 aa14.3□□□□□ -0.12
SMNDC1-203ENST00000460483 LAS1LQ9Y4W2 734 aaKnown RBP14.3□□□□□ -0.12
SMNDC1-203ENST00000460483 ZBED9Q6R2W3 1325 aa14.3□□□□□ -0.12
SMNDC1-203ENST00000460483 TRIM37O94972 964 aa14.29□□□□□ -0.12
SMNDC1-203ENST00000460483 BAG6P46379 1132 aa14.29□□□□□ -0.12
SMNDC1-203ENST00000460483 DCTN1Q14203 1278 aa14.29□□□□□ -0.12
SMNDC1-203ENST00000460483 TEX13AQ9BXU3 409 aaPredicted RBP14.29□□□□□ -0.12
SMNDC1-203ENST00000460483 KDM6AO15550 1401 aaPredicted RBP14.28□□□□□ -0.12
SMNDC1-203ENST00000460483 SOS1Q07889 1333 aaPredicted RBP14.28□□□□□ -0.12
SMNDC1-203ENST00000460483 FAM182BQ5T319 152 aa14.28□□□□□ -0.12
SMNDC1-203ENST00000460483 ZNF790Q6PG37 636 aa14.28□□□□□ -0.12
SMNDC1-203ENST00000460483 PIGBQ92521 554 aa14.28□□□□□ -0.12
SMNDC1-203ENST00000460483 FMNL2Q96PY5 1086 aa14.28□□□□□ -0.12
SMNDC1-203ENST00000460483 WNK3Q9BYP7 1800 aa14.28□□□□□ -0.12
SMNDC1-203ENST00000460483 CHL1O00533 1208 aa14.27□□□□□ -0.13
SMNDC1-203ENST00000460483 PLSCR1O15162 318 aa14.27□□□□□ -0.13
SMNDC1-203ENST00000460483 APBA3O96018 575 aa14.27□□□□□ -0.13
SMNDC1-203ENST00000460483 FARP1Q9Y4F1 1045 aaPredicted RBP14.27□□□□□ -0.13
SMNDC1-203ENST00000460483 SLC27A3Q5K4L6 730 aa14.26□□□□□ -0.13
SMNDC1-203ENST00000460483 VSIG10Q8N0Z9 540 aa14.26□□□□□ -0.13
SMNDC1-203ENST00000460483 KCNQ2O43526 872 aa14.25□□□□□ -0.13
SMNDC1-203ENST00000460483 NPM2Q86SE8 214 aaKnown RBP14.25□□□□□ -0.13
SMNDC1-203ENST00000460483 THUMPD2Q9BTF0 503 aaKnown RBP14.25□□□□□ -0.13
SMNDC1-203ENST00000460483 MRC1P22897 1456 aa14.25□□□□□ -0.13
SMNDC1-203ENST00000460483 ZNF521Q96K83 1311 aa14.24□□□□□ -0.13
SMNDC1-203ENST00000460483 STARD3NLO95772 234 aa14.24□□□□□ -0.13
SMNDC1-203ENST00000460483 HOXB7P09629 217 aa14.24□□□□□ -0.13
SMNDC1-203ENST00000460483 SNRPA1P09661 255 aaKnown RBP14.24□□□□□ -0.13
SMNDC1-203ENST00000460483 CT47B1P0C2W7 299 aaPredicted RBP14.24□□□□□ -0.13
SMNDC1-203ENST00000460483 CD44P16070 742 aaKnown RBP14.24□□□□□ -0.13
SMNDC1-203ENST00000460483 YTHDC1Q96MU7 727 aaKnown RBP14.24□□□□□ -0.13
SMNDC1-203ENST00000460483 ATG3Q9NT62 314 aa14.24□□□□□ -0.13
SMNDC1-203ENST00000460483 PALLDQ8WX93 1383 aa14.23□□□□□ -0.13
SMNDC1-203ENST00000460483 ZNF853P0CG23 659 aa14.23□□□□□ -0.13
SMNDC1-203ENST00000460483 ZNF428Q96B54 188 aa14.23□□□□□ -0.13
SMNDC1-203ENST00000460483 LOC102724428A0A0B4J2F2 783 aa14.22□□□□□ -0.13
SMNDC1-203ENST00000460483 PTCD1O75127 700 aaKnown RBP14.22□□□□□ -0.13
SMNDC1-203ENST00000460483 SIK1P57059 783 aa14.22□□□□□ -0.13
SMNDC1-203ENST00000460483 SLFN5Q08AF3 891 aa14.22□□□□□ -0.13
SMNDC1-203ENST00000460483 MBIPQ9NS73 344 aa14.22□□□□□ -0.13
SMNDC1-203ENST00000460483 ASAP1Q9ULH1 1129 aa14.22□□□□□ -0.13
SMNDC1-203ENST00000460483 ATP6V1AP38606 617 aa14.21□□□□□ -0.13
SMNDC1-203ENST00000460483 CCNL1Q9UK58 526 aaPredicted RBP14.21□□□□□ -0.13
SMNDC1-203ENST00000460483 EIF4A1P60842 406 aaKnown RBP14.2□□□□□ -0.14
SMNDC1-203ENST00000460483 SLC39A6Q13433 755 aa14.2□□□□□ -0.14
SMNDC1-203ENST00000460483 MIS18AQ9NYP9 233 aa14.2□□□□□ -0.14
SMNDC1-203ENST00000460483 FANCIQ9NVI1 1328 aa14.19□□□□□ -0.14
SMNDC1-203ENST00000460483 SENP3-EIF4A1A0A087X0R7 540 aa14.19□□□□□ -0.14
SMNDC1-203ENST00000460483 SPDYE4A6NLX3 237 aa14.19□□□□□ -0.14
SMNDC1-203ENST00000460483 ZNF496Q96IT1 587 aaPredicted RBP14.19□□□□□ -0.14
SMNDC1-203ENST00000460483 ADAMTS7Q9UKP4 1686 aa14.19□□□□□ -0.14
SMNDC1-203ENST00000460483 HEG1Q9ULI3 1381 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms