RNA–Protein interactions for RNA: ENST00000460475.1

PLOD3-209, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 3

Gene PLOD3, Length 746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-209ENST00000460475 SLC52A2Q9HAB3 445 aa23.68■■□□□ 1.38
PLOD3-209ENST00000460475 GNAT3A8MTJ3 354 aa23.67■■□□□ 1.38
PLOD3-209ENST00000460475 CASZ1Q86V15 1759 aa23.67■■□□□ 1.38
PLOD3-209ENST00000460475 C5P01031 1676 aa23.67■■□□□ 1.38
PLOD3-209ENST00000460475 LOC102724428A0A0B4J2F2 783 aa23.66■■□□□ 1.38
PLOD3-209ENST00000460475 SIK1P57059 783 aa23.66■■□□□ 1.38
PLOD3-209ENST00000460475 PLEKHF1Q96S99 279 aa23.66■■□□□ 1.38
PLOD3-209ENST00000460475 QSER1Q2KHR3 1735 aa23.66■■□□□ 1.38
PLOD3-209ENST00000460475 ZNF831Q5JPB2 1677 aa23.66■■□□□ 1.38
PLOD3-209ENST00000460475 LRP5O75197 1615 aa23.66■■□□□ 1.38
PLOD3-209ENST00000460475 IL17REQ8NFR9 667 aa23.65■■□□□ 1.38
PLOD3-209ENST00000460475 PNNQ9H307 717 aaKnown RBP23.63■■□□□ 1.37
PLOD3-209ENST00000460475 CEMIPQ8WUJ3 1361 aa23.63■■□□□ 1.37
PLOD3-209ENST00000460475 TUBGCP6Q96RT7 1819 aa23.62■■□□□ 1.37
PLOD3-209ENST00000460475 PDGFDQ9GZP0 370 aaPredicted RBP23.62■■□□□ 1.37
PLOD3-209ENST00000460475 SLC4A9Q96Q91 983 aa23.61■■□□□ 1.37
PLOD3-209ENST00000460475 SIPA1L3O60292 1781 aaPredicted RBP23.6■■□□□ 1.37
PLOD3-209ENST00000460475 C4BP0C0L5 1744 aa23.6■■□□□ 1.37
PLOD3-209ENST00000460475 HTATSF1O43719 755 aaKnown RBP23.6■■□□□ 1.37
PLOD3-209ENST00000460475 NEFMP07197 916 aa23.59■■□□□ 1.37
PLOD3-209ENST00000460475 ATP6V1AP38606 617 aa23.59■■□□□ 1.37
PLOD3-209ENST00000460475 ITPK1Q13572 414 aa23.59■■□□□ 1.37
PLOD3-209ENST00000460475 TFCP2L1Q9NZI6 479 aa23.59■■□□□ 1.37
PLOD3-209ENST00000460475 PNPLA7Q6ZV29 1317 aa23.59■■□□□ 1.37
PLOD3-209ENST00000460475 DLG5Q8TDM6 1919 aa23.58■■□□□ 1.37
PLOD3-209ENST00000460475 LINC00116Q8NCU8 138 aa23.57■■□□□ 1.36
PLOD3-209ENST00000460475 RBM42Q9BTD8 480 aaKnown RBP23.57■■□□□ 1.36
PLOD3-209ENST00000460475 CICQ96RK0 1608 aaPredicted RBP23.57■■□□□ 1.36
PLOD3-209ENST00000460475 TEFQ10587 303 aa23.56■■□□□ 1.36
PLOD3-209ENST00000460475 SPON1Q9HCB6 807 aa23.56■■□□□ 1.36
PLOD3-209ENST00000460475 COL5A3P25940 1745 aaPredicted RBP23.56■■□□□ 1.36
PLOD3-209ENST00000460475 PTCD1O75127 700 aaKnown RBP23.55■■□□□ 1.36
PLOD3-209ENST00000460475 NFE2L2Q16236 605 aa23.55■■□□□ 1.36
PLOD3-209ENST00000460475 SLC16A10Q8TF71 515 aa23.55■■□□□ 1.36
PLOD3-209ENST00000460475 RTF1Q92541 710 aaKnown RBP23.55■■□□□ 1.36
PLOD3-209ENST00000460475 UBR3Q6ZT12 1888 aa23.55■■□□□ 1.36
PLOD3-209ENST00000460475 SLC39A6Q13433 755 aa23.54■■□□□ 1.36
PLOD3-209ENST00000460475 WDR43Q15061 677 aaKnown RBP eCLIP23.54■■□□□ 1.36
PLOD3-209ENST00000460475 MTFR1LQ9H019 292 aa23.54■■□□□ 1.36
PLOD3-209ENST00000460475 UBR2Q8IWV8 1755 aa23.54■■□□□ 1.36
PLOD3-209ENST00000460475 MAPK8IP3Q9UPT6 1336 aa23.54■■□□□ 1.36
PLOD3-209ENST00000460475 KCPQ6ZWJ8 1503 aa23.54■■□□□ 1.36
PLOD3-209ENST00000460475 ANP32CO43423 234 aa23.53■■□□□ 1.36
PLOD3-209ENST00000460475 FLAD1Q8NFF5 587 aa23.53■■□□□ 1.36
PLOD3-209ENST00000460475 ADAMTS8Q9UP79 889 aa23.53■■□□□ 1.36
PLOD3-209ENST00000460475 ZBTB7AO95365 584 aa23.52■■□□□ 1.36
PLOD3-209ENST00000460475 RC3H1Q5TC82 1133 aaKnown RBP23.52■■□□□ 1.36
PLOD3-209ENST00000460475 MCM10Q7L590 875 aa23.52■■□□□ 1.36
PLOD3-209ENST00000460475 AK7Q96M32 723 aa23.52■■□□□ 1.36
PLOD3-209ENST00000460475 MYH14Q7Z406 1995 aaKnown RBP23.52■■□□□ 1.36
PLOD3-209ENST00000460475 TJP1Q07157 1748 aa23.51■■□□□ 1.35
PLOD3-209ENST00000460475 COL23A1Q86Y22 540 aaPredicted RBP23.51■■□□□ 1.35
PLOD3-209ENST00000460475 COL24A1Q17RW2 1714 aa23.5■■□□□ 1.35
PLOD3-209ENST00000460475 ZNF790Q6PG37 636 aa23.5■■□□□ 1.35
PLOD3-209ENST00000460475 VSIG10Q8N0Z9 540 aa23.5■■□□□ 1.35
PLOD3-209ENST00000460475 CNTNAP4Q9C0A0 1308 aa23.5■■□□□ 1.35
PLOD3-209ENST00000460475 SSFA2P28290 1259 aa23.49■■□□□ 1.35
PLOD3-209ENST00000460475 PTGER2P43116 358 aa23.49■■□□□ 1.35
PLOD3-209ENST00000460475 DCTN1Q14203 1278 aa23.49■■□□□ 1.35
PLOD3-209ENST00000460475 AMIGO3Q86WK7 504 aa23.49■■□□□ 1.35
PLOD3-209ENST00000460475 RUNDC1Q96C34 613 aa23.49■■□□□ 1.35
PLOD3-209ENST00000460475 SGIP1Q9BQI5 828 aa23.49■■□□□ 1.35
PLOD3-209ENST00000460475 CCDC184Q52MB2 194 aa23.48■■□□□ 1.35
PLOD3-209ENST00000460475 TTC5Q8N0Z6 440 aa23.48■■□□□ 1.35
PLOD3-209ENST00000460475 BTBD11A6QL63 1104 aa23.47■■□□□ 1.35
PLOD3-209ENST00000460475 TMPOP42166 694 aaKnown RBP23.47■■□□□ 1.35
PLOD3-209ENST00000460475 ATF5Q9Y2D1 282 aaPredicted RBP23.47■■□□□ 1.35
PLOD3-209ENST00000460475 GNPATO15228 680 aa23.46■■□□□ 1.35
PLOD3-209ENST00000460475 TAF7Q15545 349 aaPredicted RBP23.46■■□□□ 1.35
PLOD3-209ENST00000460475 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.45■■□□□ 1.34
PLOD3-209ENST00000460475 RPS6KA4O75676 772 aa23.45■■□□□ 1.34
PLOD3-209ENST00000460475 RIPK4P57078 832 aa23.45■■□□□ 1.34
PLOD3-209ENST00000460475 DNAJC10Q8IXB1 793 aa23.45■■□□□ 1.34
PLOD3-209ENST00000460475 CCDC146Q8IYE0 955 aa23.45■■□□□ 1.34
PLOD3-209ENST00000460475 ZNF496Q96IT1 587 aaPredicted RBP23.45■■□□□ 1.34
PLOD3-209ENST00000460475 CRKLP46109 303 aaKnown RBP23.44■■□□□ 1.34
PLOD3-209ENST00000460475 HEG1Q9ULI3 1381 aa23.43■■□□□ 1.34
PLOD3-209ENST00000460475 CYP19A1P11511 503 aaPredicted RBP23.43■■□□□ 1.34
PLOD3-209ENST00000460475 ADRA2BP18089 450 aa23.43■■□□□ 1.34
PLOD3-209ENST00000460475 RTCBQ9Y3I0 505 aaKnown RBP23.43■■□□□ 1.34
PLOD3-209ENST00000460475 MSH5O43196 834 aa23.42■■□□□ 1.34
PLOD3-209ENST00000460475 KCNQ3O43525 872 aa23.42■■□□□ 1.34
PLOD3-209ENST00000460475 INTS5Q6P9B9 1019 aaKnown RBP23.42■■□□□ 1.34
PLOD3-209ENST00000460475 SMIM5Q71RC9 77 aa23.42■■□□□ 1.34
PLOD3-209ENST00000460475 PNISRQ8TF01 805 aaKnown RBP23.42■■□□□ 1.34
PLOD3-209ENST00000460475 FMNL2Q96PY5 1086 aa23.42■■□□□ 1.34
PLOD3-209ENST00000460475 PHF14O94880 888 aa23.41■■□□□ 1.34
PLOD3-209ENST00000460475 LMOD3Q0VAK6 560 aa23.41■■□□□ 1.34
PLOD3-209ENST00000460475 TEX13AQ9BXU3 409 aaPredicted RBP23.41■■□□□ 1.34
PLOD3-209ENST00000460475 TRAPPC3LQ5T215 181 aa23.4■■□□□ 1.34
PLOD3-209ENST00000460475 THUMPD2Q9BTF0 503 aaKnown RBP23.4■■□□□ 1.34
PLOD3-209ENST00000460475 CCDC87Q9NVE4 849 aa23.4■■□□□ 1.34
PLOD3-209ENST00000460475 MRS2Q9HD23 443 aa23.39■■□□□ 1.33
PLOD3-209ENST00000460475 KDM3BQ7LBC6 1761 aa23.39■■□□□ 1.33
PLOD3-209ENST00000460475 ARHGEF1Q92888 912 aaKnown RBP23.38■■□□□ 1.33
PLOD3-209ENST00000460475 PPP1R1BQ9UD71 204 aaPredicted RBP23.38■■□□□ 1.33
PLOD3-209ENST00000460475 TRIM35Q9UPQ4 493 aa23.38■■□□□ 1.33
PLOD3-209ENST00000460475 RRP7AQ9Y3A4 280 aaKnown RBP23.38■■□□□ 1.33
PLOD3-209ENST00000460475 STARD3NLO95772 234 aa23.37■■□□□ 1.33
PLOD3-209ENST00000460475 POLD1P28340 1107 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms