RNA–Protein interactions for RNA: ENST00000460444.5

ATG7-217, Transcript of autophagy related 7, humanhuman

TSL 4

Gene ATG7, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG7-217ENST00000460444 NPC1L1Q9UHC9 1359 aa13.54□□□□□ -0.24
ATG7-217ENST00000460444 COL3A1P02461 1466 aaPredicted RBP13.54□□□□□ -0.24
ATG7-217ENST00000460444 COL5A3P25940 1745 aaPredicted RBP13.53□□□□□ -0.24
ATG7-217ENST00000460444 POLD1P28340 1107 aa13.53□□□□□ -0.24
ATG7-217ENST00000460444 ATP6V1AP38606 617 aa13.53□□□□□ -0.24
ATG7-217ENST00000460444 MSL1Q68DK7 614 aa13.53□□□□□ -0.24
ATG7-217ENST00000460444 CFAP53Q96M91 514 aa13.53□□□□□ -0.24
ATG7-217ENST00000460444 COL24A1Q17RW2 1714 aa13.53□□□□□ -0.24
ATG7-217ENST00000460444 LOC102724428A0A0B4J2F2 783 aa13.52□□□□□ -0.25
ATG7-217ENST00000460444 SIK1P57059 783 aa13.52□□□□□ -0.25
ATG7-217ENST00000460444 ARXQ96QS3 562 aa13.52□□□□□ -0.25
ATG7-217ENST00000460444 FHDC1Q9C0D6 1143 aaPredicted RBP13.52□□□□□ -0.25
ATG7-217ENST00000460444 SMIM5Q71RC9 77 aa13.51□□□□□ -0.25
ATG7-217ENST00000460444 COL23A1Q86Y22 540 aaPredicted RBP13.51□□□□□ -0.25
ATG7-217ENST00000460444 ATG3Q9NT62 314 aa13.51□□□□□ -0.25
ATG7-217ENST00000460444 ERVV-2B6SEH9 535 aa13.5□□□□□ -0.25
ATG7-217ENST00000460444 LINC00116Q8NCU8 138 aa13.5□□□□□ -0.25
ATG7-217ENST00000460444 SLC16A10Q8TF71 515 aa13.5□□□□□ -0.25
ATG7-217ENST00000460444 TJP1Q07157 1748 aa13.5□□□□□ -0.25
ATG7-217ENST00000460444 GNPATO15228 680 aa13.49□□□□□ -0.25
ATG7-217ENST00000460444 PTCD1O75127 700 aaKnown RBP13.49□□□□□ -0.25
ATG7-217ENST00000460444 HMGB2P26583 209 aaKnown RBP13.49□□□□□ -0.25
ATG7-217ENST00000460444 ITPK1Q13572 414 aa13.49□□□□□ -0.25
ATG7-217ENST00000460444 ZNF831Q5JPB2 1677 aa13.49□□□□□ -0.25
ATG7-217ENST00000460444 C4AP0C0L4 1744 aa13.48□□□□□ -0.25
ATG7-217ENST00000460444 PPP2R1AP30153 589 aa13.48□□□□□ -0.25
ATG7-217ENST00000460444 AKAP4Q5JQC9 854 aa13.48□□□□□ -0.25
ATG7-217ENST00000460444 PELP1Q8IZL8 1130 aaKnown RBP13.48□□□□□ -0.25
ATG7-217ENST00000460444 NFATC2IPQ8NCF5 419 aa13.48□□□□□ -0.25
ATG7-217ENST00000460444 SGIP1Q9BQI5 828 aa13.48□□□□□ -0.25
ATG7-217ENST00000460444 MTHFSDQ2M296 383 aaKnown RBP13.47□□□□□ -0.25
ATG7-217ENST00000460444 FLAD1Q8NFF5 587 aa13.47□□□□□ -0.25
ATG7-217ENST00000460444 SYT17Q9BSW7 474 aa13.47□□□□□ -0.25
ATG7-217ENST00000460444 MYH14Q7Z406 1995 aaKnown RBP13.46□□□□□ -0.25
ATG7-217ENST00000460444 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.46□□□□□ -0.25
ATG7-217ENST00000460444 LGR6Q9HBX8 967 aa13.46□□□□□ -0.25
ATG7-217ENST00000460444 NUDCQ9Y266 331 aa13.46□□□□□ -0.25
ATG7-217ENST00000460444 ADAMTS7Q9UKP4 1686 aa13.46□□□□□ -0.26
ATG7-217ENST00000460444 SIPA1L3O60292 1781 aaPredicted RBP13.45□□□□□ -0.26
ATG7-217ENST00000460444 DLG5Q8TDM6 1919 aa13.45□□□□□ -0.26
ATG7-217ENST00000460444 MRC1P22897 1456 aa13.45□□□□□ -0.26
ATG7-217ENST00000460444 RNMTO43148 476 aaKnown RBP13.45□□□□□ -0.26
ATG7-217ENST00000460444 U2AF1L5P0DN76 240 aaPredicted RBP13.45□□□□□ -0.26
ATG7-217ENST00000460444 U2AF1Q01081 240 aaKnown RBP eCLIP13.45□□□□□ -0.26
ATG7-217ENST00000460444 AMIGO3Q86WK7 504 aa13.45□□□□□ -0.26
ATG7-217ENST00000460444 MAP3K5Q99683 1374 aa13.45□□□□□ -0.26
ATG7-217ENST00000460444 UTRNP46939 3433 aa13.44□□□□□ -0.26
ATG7-217ENST00000460444 SSFA2P28290 1259 aa13.44□□□□□ -0.26
ATG7-217ENST00000460444 PRKAR2BP31323 418 aa13.44□□□□□ -0.26
ATG7-217ENST00000460444 SLC52A2Q9HAB3 445 aa13.44□□□□□ -0.26
ATG7-217ENST00000460444 UBR2Q8IWV8 1755 aa13.44□□□□□ -0.26
ATG7-217ENST00000460444 SLC39A6Q13433 755 aa13.43□□□□□ -0.26
ATG7-217ENST00000460444 GAS2L2Q8NHY3 880 aa13.43□□□□□ -0.26
ATG7-217ENST00000460444 SLC4A9Q96Q91 983 aa13.43□□□□□ -0.26
ATG7-217ENST00000460444 RTCBQ9Y3I0 505 aaKnown RBP13.43□□□□□ -0.26
ATG7-217ENST00000460444 CICQ96RK0 1608 aaPredicted RBP13.42□□□□□ -0.26
ATG7-217ENST00000460444 TEFQ10587 303 aa13.42□□□□□ -0.26
ATG7-217ENST00000460444 DDX10Q13206 875 aaKnown RBP13.42□□□□□ -0.26
ATG7-217ENST00000460444 GPR162Q16538 588 aa13.42□□□□□ -0.26
ATG7-217ENST00000460444 GNAT3A8MTJ3 354 aa13.41□□□□□ -0.26
ATG7-217ENST00000460444 NLGN2Q8NFZ4 835 aa13.41□□□□□ -0.26
ATG7-217ENST00000460444 RSPH6AQ9H0K4 717 aa13.41□□□□□ -0.26
ATG7-217ENST00000460444 KCPQ6ZWJ8 1503 aa13.4□□□□□ -0.26
ATG7-217ENST00000460444 CRKLP46109 303 aaKnown RBP13.4□□□□□ -0.26
ATG7-217ENST00000460444 TRAPPC3LQ5T215 181 aa13.4□□□□□ -0.26
ATG7-217ENST00000460444 TTC5Q8N0Z6 440 aa13.4□□□□□ -0.26
ATG7-217ENST00000460444 PHACTR3Q96KR7 559 aa13.4□□□□□ -0.26
ATG7-217ENST00000460444 WWC3Q9ULE0 1092 aa13.4□□□□□ -0.26
ATG7-217ENST00000460444 N4BP2Q86UW6 1770 aaPredicted RBP13.4□□□□□ -0.26
ATG7-217ENST00000460444 CNTNAP4Q9C0A0 1308 aa13.39□□□□□ -0.27
ATG7-217ENST00000460444 NEFMP07197 916 aa13.39□□□□□ -0.27
ATG7-217ENST00000460444 RFC4P35249 363 aa13.39□□□□□ -0.27
ATG7-217ENST00000460444 DNAJC10Q8IXB1 793 aa13.39□□□□□ -0.27
ATG7-217ENST00000460444 RTF1Q92541 710 aaKnown RBP13.38□□□□□ -0.27
ATG7-217ENST00000460444 ARHGEF1Q92888 912 aaKnown RBP13.38□□□□□ -0.27
ATG7-217ENST00000460444 GIGYF1O75420 1035 aaPredicted RBP13.37□□□□□ -0.27
ATG7-217ENST00000460444 RPS6KA4O75676 772 aa13.37□□□□□ -0.27
ATG7-217ENST00000460444 RC3H1Q5TC82 1133 aaKnown RBP13.37□□□□□ -0.27
ATG7-217ENST00000460444 MMP10P09238 476 aa13.36□□□□□ -0.27
ATG7-217ENST00000460444 MCM10Q7L590 875 aa13.36□□□□□ -0.27
ATG7-217ENST00000460444 IL17REQ8NFR9 667 aa13.36□□□□□ -0.27
ATG7-217ENST00000460444 CCDC87Q9NVE4 849 aa13.36□□□□□ -0.27
ATG7-217ENST00000460444 SRP68Q9UHB9 627 aaKnown RBP13.36□□□□□ -0.27
ATG7-217ENST00000460444 ZNF330Q9Y3S2 320 aaPredicted RBP13.36□□□□□ -0.27
ATG7-217ENST00000460444 KIF13BQ9NQT8 1826 aa13.35□□□□□ -0.27
ATG7-217ENST00000460444 FCHSD2O94868 740 aa13.35□□□□□ -0.27
ATG7-217ENST00000460444 ADRA2BP18089 450 aa13.35□□□□□ -0.27
ATG7-217ENST00000460444 DCTN1Q14203 1278 aa13.35□□□□□ -0.27
ATG7-217ENST00000460444 MAPK8IP3Q9UPT6 1336 aa13.35□□□□□ -0.27
ATG7-217ENST00000460444 CANXP27824 592 aaKnown RBP13.34□□□□□ -0.27
ATG7-217ENST00000460444 RALBP1Q15311 655 aa13.34□□□□□ -0.27
ATG7-217ENST00000460444 AFDNP55196 1824 aaKnown RBP13.34□□□□□ -0.27
ATG7-217ENST00000460444 LAMB4A4D0S4 1761 aa13.33□□□□□ -0.28
ATG7-217ENST00000460444 BTBD11A6QL63 1104 aa13.33□□□□□ -0.28
ATG7-217ENST00000460444 ZPR1O75312 459 aa13.33□□□□□ -0.28
ATG7-217ENST00000460444 INTS5Q6P9B9 1019 aaKnown RBP13.33□□□□□ -0.28
ATG7-217ENST00000460444 ZNF790Q6PG37 636 aa13.33□□□□□ -0.28
ATG7-217ENST00000460444 NLGN1Q8N2Q7 840 aa13.33□□□□□ -0.28
ATG7-217ENST00000460444 ZNF496Q96IT1 587 aaPredicted RBP13.33□□□□□ -0.28
ATG7-217ENST00000460444 ZBTB1Q9Y2K1 713 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms