RNA–Protein interactions for RNA: ENST00000460217.1

FN1-214, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-214ENST00000460217 SLC52A2Q9HAB3 445 aa13.98□□□□□ -0.17
FN1-214ENST00000460217 KDM3BQ7LBC6 1761 aa13.98□□□□□ -0.17
FN1-214ENST00000460217 GNAI1P63096 354 aa13.97□□□□□ -0.17
FN1-214ENST00000460217 SLFN5Q08AF3 891 aa13.97□□□□□ -0.17
FN1-214ENST00000460217 TAF7Q15545 349 aaPredicted RBP13.97□□□□□ -0.17
FN1-214ENST00000460217 KRT27Q7Z3Y8 459 aa13.97□□□□□ -0.17
FN1-214ENST00000460217 TRMT2AQ8IZ69 625 aaKnown RBP13.97□□□□□ -0.17
FN1-214ENST00000460217 NHSQ6T4R5 1651 aa13.96□□□□□ -0.17
FN1-214ENST00000460217 CHL1O00533 1208 aa13.96□□□□□ -0.17
FN1-214ENST00000460217 MYH16Q9H6N6 1097 aa13.96□□□□□ -0.17
FN1-214ENST00000460217 SPINK5Q9NQ38 1064 aaPredicted RBP13.96□□□□□ -0.17
FN1-214ENST00000460217 PAPPAQ13219 1627 aa13.95□□□□□ -0.18
FN1-214ENST00000460217 CABP4P57796 275 aa13.95□□□□□ -0.18
FN1-214ENST00000460217 CDCA7LQ96GN5 454 aa13.95□□□□□ -0.18
FN1-214ENST00000460217 KCNA4P22459 653 aa13.94□□□□□ -0.18
FN1-214ENST00000460217 DUSP27Q5VZP5 1158 aa13.94□□□□□ -0.18
FN1-214ENST00000460217 FAM196AQ6ZSG2 479 aa13.94□□□□□ -0.18
FN1-214ENST00000460217 NFATC2IPQ8NCF5 419 aa13.94□□□□□ -0.18
FN1-214ENST00000460217 UBR2Q8IWV8 1755 aa13.94□□□□□ -0.18
FN1-214ENST00000460217 FANCIQ9NVI1 1328 aa13.93□□□□□ -0.18
FN1-214ENST00000460217 MBIPQ9NS73 344 aa13.93□□□□□ -0.18
FN1-214ENST00000460217 TMOD3Q9NYL9 352 aa13.93□□□□□ -0.18
FN1-214ENST00000460217 TSPYL4Q9UJ04 414 aa13.93□□□□□ -0.18
FN1-214ENST00000460217 BTBD11A6QL63 1104 aa13.92□□□□□ -0.18
FN1-214ENST00000460217 PRIM1P49642 420 aaKnown RBP13.92□□□□□ -0.18
FN1-214ENST00000460217 PIGBQ92521 554 aa13.91□□□□□ -0.18
FN1-214ENST00000460217 LAS1LQ9Y4W2 734 aaKnown RBP13.91□□□□□ -0.18
FN1-214ENST00000460217 BTAF1O14981 1849 aa13.91□□□□□ -0.18
FN1-214ENST00000460217 FAM182BQ5T319 152 aa13.9□□□□□ -0.18
FN1-214ENST00000460217 ZNF790Q6PG37 636 aa13.9□□□□□ -0.18
FN1-214ENST00000460217 TSR2Q969E8 191 aaKnown RBP13.9□□□□□ -0.18
FN1-214ENST00000460217 MIS18AQ9NYP9 233 aa13.9□□□□□ -0.18
FN1-214ENST00000460217 HEG1Q9ULI3 1381 aa13.89□□□□□ -0.19
FN1-214ENST00000460217 SYTL4Q96C24 671 aaPredicted RBP13.89□□□□□ -0.19
FN1-214ENST00000460217 ACSBG1Q96GR2 724 aa13.89□□□□□ -0.19
FN1-214ENST00000460217 KCPQ6ZWJ8 1503 aa13.89□□□□□ -0.19
FN1-214ENST00000460217 SOS1Q07889 1333 aaPredicted RBP13.89□□□□□ -0.19
FN1-214ENST00000460217 KCNQ2O43526 872 aa13.88□□□□□ -0.19
FN1-214ENST00000460217 CT47B1P0C2W7 299 aaPredicted RBP13.88□□□□□ -0.19
FN1-214ENST00000460217 EIF4A1P60842 406 aaKnown RBP13.88□□□□□ -0.19
FN1-214ENST00000460217 BCL11BQ9C0K0 894 aaPredicted RBP13.88□□□□□ -0.19
FN1-214ENST00000460217 ZNF831Q5JPB2 1677 aa13.88□□□□□ -0.19
FN1-214ENST00000460217 CACNA1FO60840 1977 aa13.87□□□□□ -0.19
FN1-214ENST00000460217 CICQ96RK0 1608 aaPredicted RBP13.87□□□□□ -0.19
FN1-214ENST00000460217 KCNQ3O43525 872 aa13.87□□□□□ -0.19
FN1-214ENST00000460217 SLC39A6Q13433 755 aa13.87□□□□□ -0.19
FN1-214ENST00000460217 TTC5Q8N0Z6 440 aa13.87□□□□□ -0.19
FN1-214ENST00000460217 ATG3Q9NT62 314 aa13.87□□□□□ -0.19
FN1-214ENST00000460217 ASAP1Q9ULH1 1129 aa13.87□□□□□ -0.19
FN1-214ENST00000460217 HOXB7P09629 217 aa13.86□□□□□ -0.19
FN1-214ENST00000460217 EXOSC9Q06265 439 aaKnown RBP13.86□□□□□ -0.19
FN1-214ENST00000460217 SMARCC1Q92922 1105 aaPredicted RBP13.86□□□□□ -0.19
FN1-214ENST00000460217 ZNF496Q96IT1 587 aaPredicted RBP13.86□□□□□ -0.19
FN1-214ENST00000460217 FMNL2Q96PY5 1086 aa13.86□□□□□ -0.19
FN1-214ENST00000460217 LY75O60449 1722 aa13.86□□□□□ -0.19
FN1-214ENST00000460217 TNS1Q9HBL0 1735 aaKnown RBP13.85□□□□□ -0.19
FN1-214ENST00000460217 ZNF428Q96B54 188 aa13.85□□□□□ -0.19
FN1-214ENST00000460217 LAMB4A4D0S4 1761 aa13.85□□□□□ -0.19
FN1-214ENST00000460217 EP400Q96L91 3159 aa13.85□□□□□ -0.19
FN1-214ENST00000460217 PALLDQ8WX93 1383 aa13.84□□□□□ -0.19
FN1-214ENST00000460217 GIGYF1O75420 1035 aaPredicted RBP13.84□□□□□ -0.19
FN1-214ENST00000460217 CENPBP07199 599 aaPredicted RBP13.84□□□□□ -0.19
FN1-214ENST00000460217 PTF1AQ7RTS3 328 aa13.84□□□□□ -0.19
FN1-214ENST00000460217 VSIG10Q8N0Z9 540 aa13.84□□□□□ -0.19
FN1-214ENST00000460217 C8orf58Q8NAV2 365 aa13.84□□□□□ -0.19
FN1-214ENST00000460217 C5P01031 1676 aa13.84□□□□□ -0.19
FN1-214ENST00000460217 RGPD3A6NKT7 1758 aaPredicted RBP13.83□□□□□ -0.19
FN1-214ENST00000460217 RGPD4Q7Z3J3 1758 aa13.83□□□□□ -0.19
FN1-214ENST00000460217 VAMP4O75379 141 aa13.83□□□□□ -0.2
FN1-214ENST00000460217 TRIM37O94972 964 aa13.83□□□□□ -0.2
FN1-214ENST00000460217 SNRPA1P09661 255 aaKnown RBP13.83□□□□□ -0.2
FN1-214ENST00000460217 KRT24Q2M2I5 525 aa13.83□□□□□ -0.2
FN1-214ENST00000460217 TWISTNBQ3B726 338 aaPredicted RBP13.83□□□□□ -0.2
FN1-214ENST00000460217 TSPYL6Q8N831 410 aa13.83□□□□□ -0.2
FN1-214ENST00000460217 CHMP4AQ9BY43 222 aa13.83□□□□□ -0.2
FN1-214ENST00000460217 TJP1Q07157 1748 aa13.81□□□□□ -0.2
FN1-214ENST00000460217 LOC102724428A0A0B4J2F2 783 aa13.81□□□□□ -0.2
FN1-214ENST00000460217 PTCD1O75127 700 aaKnown RBP13.81□□□□□ -0.2
FN1-214ENST00000460217 SIK1P57059 783 aa13.81□□□□□ -0.2
FN1-214ENST00000460217 PPP4R3CPQ6ZMV5 832 aa13.81□□□□□ -0.2
FN1-214ENST00000460217 ELL2O00472 640 aaPredicted RBP13.8□□□□□ -0.2
FN1-214ENST00000460217 PLSCR1O15162 318 aa13.8□□□□□ -0.2
FN1-214ENST00000460217 TEX13AQ9BXU3 409 aaPredicted RBP13.8□□□□□ -0.2
FN1-214ENST00000460217 COL5A3P25940 1745 aaPredicted RBP13.8□□□□□ -0.2
FN1-214ENST00000460217 TAF1LQ8IZX4 1826 aa13.79□□□□□ -0.2
FN1-214ENST00000460217 ALDH1L2Q3SY69 923 aa13.79□□□□□ -0.2
FN1-214ENST00000460217 SLC4A9Q96Q91 983 aa13.79□□□□□ -0.2
FN1-214ENST00000460217 RBM42Q9BTD8 480 aaKnown RBP13.79□□□□□ -0.2
FN1-214ENST00000460217 RCAN3Q9UKA8 241 aa13.79□□□□□ -0.2
FN1-214ENST00000460217 RARSP54136 660 aaKnown RBP13.78□□□□□ -0.2
FN1-214ENST00000460217 CCDC30Q5VVM6 783 aa13.78□□□□□ -0.2
FN1-214ENST00000460217 ERBB4Q15303 1308 aa13.78□□□□□ -0.2
FN1-214ENST00000460217 PRAMEF22A3QJZ6 481 aa13.77□□□□□ -0.21
FN1-214ENST00000460217 HMGB2P26583 209 aaKnown RBP13.77□□□□□ -0.21
FN1-214ENST00000460217 BRPF1P55201 1214 aaPredicted RBP13.77□□□□□ -0.21
FN1-214ENST00000460217 SLC27A3Q5K4L6 730 aa13.77□□□□□ -0.21
FN1-214ENST00000460217 HDGFL1Q5TGJ6 251 aa13.77□□□□□ -0.21
FN1-214ENST00000460217 MYH14Q7Z406 1995 aaKnown RBP13.77□□□□□ -0.21
FN1-214ENST00000460217 CCDC125Q86Z20 511 aa13.77□□□□□ -0.21
FN1-214ENST00000460217 RREB1Q92766 1687 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms