RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 TNFRSF10AO00220 468 aa9.52□□□□□ -0.89
CCDC50-203ENST00000460064 GDF9O60383 454 aa9.52□□□□□ -0.89
CCDC50-203ENST00000460064 CBLBQ13191 982 aa9.52□□□□□ -0.89
CCDC50-203ENST00000460064 ITPKCQ96DU7 683 aa9.52□□□□□ -0.89
CCDC50-203ENST00000460064 SLC4A9Q96Q91 983 aa9.52□□□□□ -0.89
CCDC50-203ENST00000460064 MKNK1Q9BUB5 465 aa9.52□□□□□ -0.89
CCDC50-203ENST00000460064 ZIC2O95409 532 aaPredicted RBP9.51□□□□□ -0.89
CCDC50-203ENST00000460064 ABL1P00519 1130 aa9.51□□□□□ -0.89
CCDC50-203ENST00000460064 ADH1AP07327 375 aa9.51□□□□□ -0.89
CCDC50-203ENST00000460064 IGFBP4P22692 258 aa9.51□□□□□ -0.89
CCDC50-203ENST00000460064 FKBP5Q13451 457 aaPredicted RBP9.51□□□□□ -0.89
CCDC50-203ENST00000460064 CHMP7Q8WUX9 453 aaPredicted RBP9.51□□□□□ -0.89
CCDC50-203ENST00000460064 SMTNP53814 917 aa9.5□□□□□ -0.89
CCDC50-203ENST00000460064 WDR4P57081 412 aaKnown RBP9.5□□□□□ -0.89
CCDC50-203ENST00000460064 RGS22Q8NE09 1264 aa9.5□□□□□ -0.89
CCDC50-203ENST00000460064 XAGE2Q96GT9 111 aa9.5□□□□□ -0.89
CCDC50-203ENST00000460064 TSPAN10Q9H1Z9 355 aaPredicted RBP9.5□□□□□ -0.89
CCDC50-203ENST00000460064 A0A1W2PRU2 124 aa9.49□□□□□ -0.89
CCDC50-203ENST00000460064 SOWAHDA6NJG2 315 aa9.49□□□□□ -0.89
CCDC50-203ENST00000460064 A6NJY4 79 aa9.49□□□□□ -0.89
CCDC50-203ENST00000460064 NPM2Q86SE8 214 aaKnown RBP9.49□□□□□ -0.89
CCDC50-203ENST00000460064 CNKSR1Q969H4 720 aa9.49□□□□□ -0.89
CCDC50-203ENST00000460064 VTI1AQ96AJ9 217 aa9.49□□□□□ -0.89
CCDC50-203ENST00000460064 PURBQ96QR8 312 aaKnown RBP9.49□□□□□ -0.89
CCDC50-203ENST00000460064 KLF16Q9BXK1 252 aaPredicted RBP9.49□□□□□ -0.89
CCDC50-203ENST00000460064 ZFAND3Q9H8U3 227 aa9.49□□□□□ -0.89
CCDC50-203ENST00000460064 SEPT3Q9UH03 358 aa9.49□□□□□ -0.89
CCDC50-203ENST00000460064 PTCD1O75127 700 aaKnown RBP9.48□□□□□ -0.89
CCDC50-203ENST00000460064 IL2RAP01589 272 aa9.48□□□□□ -0.89
CCDC50-203ENST00000460064 EPHA4P54764 986 aa9.48□□□□□ -0.89
CCDC50-203ENST00000460064 NAA30Q147X3 362 aaPredicted RBP9.48□□□□□ -0.89
CCDC50-203ENST00000460064 TBCELQ5QJ74 424 aa9.48□□□□□ -0.89
CCDC50-203ENST00000460064 CAPN12Q6ZSI9 719 aa9.48□□□□□ -0.89
CCDC50-203ENST00000460064 Q6ZVU0 165 aa9.48□□□□□ -0.89
CCDC50-203ENST00000460064 KDF1Q8NAX2 398 aaPredicted RBP9.48□□□□□ -0.89
CCDC50-203ENST00000460064 AGBL1Q96MI9 1066 aa9.48□□□□□ -0.89
CCDC50-203ENST00000460064 ESYT1Q9BSJ8 1104 aa9.48□□□□□ -0.89
CCDC50-203ENST00000460064 ANO2Q9NQ90 1003 aa9.48□□□□□ -0.89
CCDC50-203ENST00000460064 TOR4AQ9NXH8 423 aa9.48□□□□□ -0.89
CCDC50-203ENST00000460064 BIN2Q9UBW5 565 aaPredicted RBP9.48□□□□□ -0.89
CCDC50-203ENST00000460064 FOXO3O43524 673 aa9.47□□□□□ -0.89
CCDC50-203ENST00000460064 C21orf2O43822 256 aa9.47□□□□□ -0.89
CCDC50-203ENST00000460064 PPP1R12BO60237 982 aaPredicted RBP9.47□□□□□ -0.89
CCDC50-203ENST00000460064 SMPD1P17405 629 aa9.47□□□□□ -0.89
CCDC50-203ENST00000460064 PTGIRP43119 386 aa9.47□□□□□ -0.89
CCDC50-203ENST00000460064 RELBQ01201 579 aa9.47□□□□□ -0.89
CCDC50-203ENST00000460064 GTF3C2Q8WUA4 911 aaPredicted RBP9.47□□□□□ -0.89
CCDC50-203ENST00000460064 SCHIP1Q9P0W5 487 aaPredicted RBP9.47□□□□□ -0.89
CCDC50-203ENST00000460064 MEN1O00255 615 aa9.46□□□□□ -0.9
CCDC50-203ENST00000460064 TIMP2P16035 220 aa9.46□□□□□ -0.9
CCDC50-203ENST00000460064 FOXK2Q01167 660 aa9.46□□□□□ -0.9
CCDC50-203ENST00000460064 MTFR1Q15390 333 aa9.46□□□□□ -0.9
CCDC50-203ENST00000460064 TLR1Q15399 786 aa9.46□□□□□ -0.9
CCDC50-203ENST00000460064 SLC9A9Q8IVB4 645 aa9.46□□□□□ -0.9
CCDC50-203ENST00000460064 NLRP3Q96P20 1036 aa9.46□□□□□ -0.9
CCDC50-203ENST00000460064 ZNF395Q9H8N7 513 aaPredicted RBP9.46□□□□□ -0.9
CCDC50-203ENST00000460064 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.46□□□□□ -0.9
CCDC50-203ENST00000460064 CENPCQ03188 943 aa9.45□□□□□ -0.9
CCDC50-203ENST00000460064 CLN3Q13286 438 aa9.45□□□□□ -0.9
CCDC50-203ENST00000460064 ZNF211Q13398 564 aaPredicted RBP9.45□□□□□ -0.9
CCDC50-203ENST00000460064 COL26A1Q96A83 441 aa9.45□□□□□ -0.9
CCDC50-203ENST00000460064 EGFL7Q9UHF1 273 aa9.45□□□□□ -0.9
CCDC50-203ENST00000460064 CDK2AP1O14519 115 aa9.44□□□□□ -0.9
CCDC50-203ENST00000460064 FOXD4L5Q5VV16 416 aaPredicted RBP9.44□□□□□ -0.9
CCDC50-203ENST00000460064 FOXD4L4Q8WXT5 416 aaPredicted RBP9.44□□□□□ -0.9
CCDC50-203ENST00000460064 CHMP3Q9Y3E7 222 aa9.44□□□□□ -0.9
CCDC50-203ENST00000460064 HRH3Q9Y5N1 445 aa9.44□□□□□ -0.9
CCDC50-203ENST00000460064 H3BRB1 525 aa9.43□□□□□ -0.9
CCDC50-203ENST00000460064 ICMTO60725 284 aa9.43□□□□□ -0.9
CCDC50-203ENST00000460064 PRR20EP86478 221 aa9.43□□□□□ -0.9
CCDC50-203ENST00000460064 PRR20CP86479 221 aa9.43□□□□□ -0.9
CCDC50-203ENST00000460064 PRR20DP86480 221 aa9.43□□□□□ -0.9
CCDC50-203ENST00000460064 PRR20BP86481 221 aa9.43□□□□□ -0.9
CCDC50-203ENST00000460064 PRR20AP86496 221 aa9.43□□□□□ -0.9
CCDC50-203ENST00000460064 FKBP4Q02790 459 aaKnown RBP eCLIP9.43□□□□□ -0.9
CCDC50-203ENST00000460064 TRIM67Q6ZTA4 783 aa9.43□□□□□ -0.9
CCDC50-203ENST00000460064 GLYCTKQ8IVS8 523 aa9.43□□□□□ -0.9
CCDC50-203ENST00000460064 HPS1Q92902 700 aa9.43□□□□□ -0.9
CCDC50-203ENST00000460064 TUT1Q9H6E5 874 aaKnown RBP9.43□□□□□ -0.9
CCDC50-203ENST00000460064 DNMT3AQ9Y6K1 912 aaPredicted RBP9.43□□□□□ -0.9
CCDC50-203ENST00000460064 PSMA6P60900 246 aaKnown RBP9.42□□□□□ -0.9
CCDC50-203ENST00000460064 C2orf49Q9BVC5 232 aaPredicted RBP9.42□□□□□ -0.9
CCDC50-203ENST00000460064 SF3B2Q13435 895 aaKnown RBP9.41□□□□□ -0.9
CCDC50-203ENST00000460064 MTMR3Q13615 1198 aa9.41□□□□□ -0.9
CCDC50-203ENST00000460064 STAG2Q8N3U4 1231 aa9.41□□□□□ -0.9
CCDC50-203ENST00000460064 CABP1Q9NZU7 370 aa9.41□□□□□ -0.9
CCDC50-203ENST00000460064 USP3Q9Y6I4 520 aa9.41□□□□□ -0.9
CCDC50-203ENST00000460064 GTF2E1P29083 439 aaPredicted RBP9.4□□□□□ -0.9
CCDC50-203ENST00000460064 NBPF15Q8N660 670 aa9.4□□□□□ -0.9
CCDC50-203ENST00000460064 ZSCAN10Q96SZ4 725 aaPredicted RBP9.4□□□□□ -0.9
CCDC50-203ENST00000460064 FHDC1Q9C0D6 1143 aaPredicted RBP9.4□□□□□ -0.9
CCDC50-203ENST00000460064 IQSEC3Q9UPP2 1182 aaPredicted RBP9.4□□□□□ -0.9
CCDC50-203ENST00000460064 SERTM1A2A2V5 107 aa9.39□□□□□ -0.91
CCDC50-203ENST00000460064 CAPN5O15484 640 aaPredicted RBP9.39□□□□□ -0.91
CCDC50-203ENST00000460064 MARSP56192 900 aaKnown RBP9.39□□□□□ -0.91
CCDC50-203ENST00000460064 TMEM214Q6NUQ4 689 aaKnown RBP9.39□□□□□ -0.91
CCDC50-203ENST00000460064 C16orf46Q6P387 395 aa9.39□□□□□ -0.91
CCDC50-203ENST00000460064 TSEN34Q9BSV6 310 aaKnown RBP9.39□□□□□ -0.91
CCDC50-203ENST00000460064 ZNF232Q9UNY5 417 aa9.39□□□□□ -0.91
CCDC50-203ENST00000460064 NOS2P35228 1153 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms