RNA–Protein interactions for RNA: ENST00000459750.5

MCF2L2-204, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best)

Gene MCF2L2, Length 3,090 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-204ENST00000459750 FOXD4L4Q8WXT5 416 aaPredicted RBP11.2□□□□□ -0.62
MCF2L2-204ENST00000459750 ZNF330Q9Y3S2 320 aaPredicted RBP11.2□□□□□ -0.62
MCF2L2-204ENST00000459750 USP31Q70CQ4 1352 aa11.2□□□□□ -0.62
MCF2L2-204ENST00000459750 PI4KAP2A4QPH2 592 aa11.2□□□□□ -0.62
MCF2L2-204ENST00000459750 TRIM6-TRIM34B2RNG4 842 aa11.2□□□□□ -0.62
MCF2L2-204ENST00000459750 NUTM1Q86Y26 1132 aa11.2□□□□□ -0.62
MCF2L2-204ENST00000459750 PLEKHM2Q8IWE5 1019 aa11.2□□□□□ -0.62
MCF2L2-204ENST00000459750 PI4KAP1Q8N8J0 262 aa11.2□□□□□ -0.62
MCF2L2-204ENST00000459750 IP6K1Q92551 441 aa11.2□□□□□ -0.62
MCF2L2-204ENST00000459750 ARHGAP45Q92619 1136 aa11.2□□□□□ -0.62
MCF2L2-204ENST00000459750 CRB1P82279 1406 aa11.19□□□□□ -0.62
MCF2L2-204ENST00000459750 SSH2Q76I76 1423 aa11.19□□□□□ -0.62
MCF2L2-204ENST00000459750 C1orf141Q5JVX7 400 aa11.19□□□□□ -0.62
MCF2L2-204ENST00000459750 CCDC30Q5VVM6 783 aa11.19□□□□□ -0.62
MCF2L2-204ENST00000459750 NBPF7P0C2Y1 421 aaPredicted RBP11.18□□□□□ -0.62
MCF2L2-204ENST00000459750 MON2Q7Z3U7 1717 aa11.18□□□□□ -0.62
MCF2L2-204ENST00000459750 CWF19L2Q2TBE0 894 aaKnown RBP11.18□□□□□ -0.62
MCF2L2-204ENST00000459750 INTS3Q68E01 1043 aaKnown RBP11.18□□□□□ -0.62
MCF2L2-204ENST00000459750 GCC1Q96CN9 775 aa11.18□□□□□ -0.62
MCF2L2-204ENST00000459750 KAT6BQ8WYB5 2073 aa11.18□□□□□ -0.62
MCF2L2-204ENST00000459750 HSP90AB1P08238 724 aaKnown RBP11.17□□□□□ -0.62
MCF2L2-204ENST00000459750 ARHGAP23Q9P227 1491 aa11.17□□□□□ -0.62
MCF2L2-204ENST00000459750 ANKRD44Q8N8A2 993 aa11.17□□□□□ -0.62
MCF2L2-204ENST00000459750 STRN4Q9NRL3 753 aa11.17□□□□□ -0.62
MCF2L2-204ENST00000459750 RTL1A6NKG5 1358 aa11.17□□□□□ -0.62
MCF2L2-204ENST00000459750 MAP3K5Q99683 1374 aa11.17□□□□□ -0.62
MCF2L2-204ENST00000459750 SDSP20132 328 aa11.17□□□□□ -0.62
MCF2L2-204ENST00000459750 NFATC2IPQ8NCF5 419 aa11.17□□□□□ -0.62
MCF2L2-204ENST00000459750 ARHGEF10O15013 1369 aa11.17□□□□□ -0.62
MCF2L2-204ENST00000459750 OS9Q13438 667 aaPredicted RBP11.16□□□□□ -0.62
MCF2L2-204ENST00000459750 FOXD4L6Q3SYB3 417 aaPredicted RBP11.16□□□□□ -0.62
MCF2L2-204ENST00000459750 FOXD4L3Q6VB84 417 aaPredicted RBP11.16□□□□□ -0.62
MCF2L2-204ENST00000459750 HSCBQ8IWL3 235 aa11.16□□□□□ -0.62
MCF2L2-204ENST00000459750 LARP6Q9BRS8 491 aaKnown RBP11.16□□□□□ -0.62
MCF2L2-204ENST00000459750 DCTPP1Q9H773 170 aa11.16□□□□□ -0.62
MCF2L2-204ENST00000459750 SURF6O75683 361 aaKnown RBP11.16□□□□□ -0.62
MCF2L2-204ENST00000459750 GNAI2P04899 355 aa11.16□□□□□ -0.62
MCF2L2-204ENST00000459750 SIL1Q9H173 461 aa11.16□□□□□ -0.62
MCF2L2-204ENST00000459750 SLIT1O75093 1534 aa11.16□□□□□ -0.62
MCF2L2-204ENST00000459750 UBTFL1P0CB47 393 aaPredicted RBP11.15□□□□□ -0.62
MCF2L2-204ENST00000459750 CHAMP1Q96JM3 812 aa11.15□□□□□ -0.62
MCF2L2-204ENST00000459750 BRPF3Q9ULD4 1205 aa11.15□□□□□ -0.62
MCF2L2-204ENST00000459750 PA2G4Q9UQ80 394 aaKnown RBP11.15□□□□□ -0.62
MCF2L2-204ENST00000459750 PTCH1Q13635 1447 aa11.15□□□□□ -0.62
MCF2L2-204ENST00000459750 AKAP12Q02952 1782 aa11.15□□□□□ -0.62
MCF2L2-204ENST00000459750 KLHDC4Q8TBB5 520 aa11.15□□□□□ -0.62
MCF2L2-204ENST00000459750 PIK3C2AO00443 1686 aa11.15□□□□□ -0.62
MCF2L2-204ENST00000459750 SRGAP3O43295 1099 aa11.15□□□□□ -0.63
MCF2L2-204ENST00000459750 ARHGEF25Q86VW2 580 aa11.15□□□□□ -0.63
MCF2L2-204ENST00000459750 DDX54Q8TDD1 881 aaKnown RBP11.15□□□□□ -0.63
MCF2L2-204ENST00000459750 RAPGEF4Q8WZA2 1011 aa11.15□□□□□ -0.63
MCF2L2-204ENST00000459750 USP44Q9H0E7 712 aa11.15□□□□□ -0.63
MCF2L2-204ENST00000459750 NPHP4O75161 1426 aaPredicted RBP11.14□□□□□ -0.63
MCF2L2-204ENST00000459750 TMEM94Q12767 1356 aa11.14□□□□□ -0.63
MCF2L2-204ENST00000459750 PLEKHO1Q53GL0 409 aaPredicted RBP11.14□□□□□ -0.63
MCF2L2-204ENST00000459750 BMP2KLQ5H9B9 411 aa11.14□□□□□ -0.63
MCF2L2-204ENST00000459750 C19orf44Q9H6X5 657 aa11.14□□□□□ -0.63
MCF2L2-204ENST00000459750 RGS12O14924 1447 aa11.14□□□□□ -0.63
MCF2L2-204ENST00000459750 EIF4A1P60842 406 aaKnown RBP11.14□□□□□ -0.63
MCF2L2-204ENST00000459750 PPP1R42Q7Z4L9 355 aa11.14□□□□□ -0.63
MCF2L2-204ENST00000459750 UNC5CLQ8IV45 518 aa11.14□□□□□ -0.63
MCF2L2-204ENST00000459750 PTCD1O75127 700 aaKnown RBP11.13□□□□□ -0.63
MCF2L2-204ENST00000459750 BRPF1P55201 1214 aaPredicted RBP11.13□□□□□ -0.63
MCF2L2-204ENST00000459750 KCNH5Q8NCM2 988 aa11.13□□□□□ -0.63
MCF2L2-204ENST00000459750 CHMP4BQ9H444 224 aaKnown RBP11.13□□□□□ -0.63
MCF2L2-204ENST00000459750 C9orf78Q9NZ63 289 aaPredicted RBP11.13□□□□□ -0.63
MCF2L2-204ENST00000459750 MAP3K2Q9Y2U5 619 aa11.13□□□□□ -0.63
MCF2L2-204ENST00000459750 PTPRCP08575 1304 aa11.13□□□□□ -0.63
MCF2L2-204ENST00000459750 KDRP35968 1356 aa11.13□□□□□ -0.63
MCF2L2-204ENST00000459750 CDC45O75419 566 aa11.12□□□□□ -0.63
MCF2L2-204ENST00000459750 CCT4P50991 539 aaKnown RBP11.12□□□□□ -0.63
MCF2L2-204ENST00000459750 TTC22Q5TAA0 569 aa11.12□□□□□ -0.63
MCF2L2-204ENST00000459750 GSE1Q14687 1217 aa11.12□□□□□ -0.63
MCF2L2-204ENST00000459750 RPAP2Q8IXW5 612 aaPredicted RBP11.12□□□□□ -0.63
MCF2L2-204ENST00000459750 SRCIN1Q9C0H9 1055 aa11.12□□□□□ -0.63
MCF2L2-204ENST00000459750 ATP5J2-PTCD1G3V325 749 aa11.12□□□□□ -0.63
MCF2L2-204ENST00000459750 RNMTO43148 476 aaKnown RBP11.12□□□□□ -0.63
MCF2L2-204ENST00000459750 HMMRO75330 724 aa11.12□□□□□ -0.63
MCF2L2-204ENST00000459750 KNDC1Q76NI1 1749 aa11.11□□□□□ -0.63
MCF2L2-204ENST00000459750 ANO2Q9NQ90 1003 aa11.11□□□□□ -0.63
MCF2L2-204ENST00000459750 ATP10DQ9P241 1426 aa11.11□□□□□ -0.63
MCF2L2-204ENST00000459750 PDE1AP54750 535 aa11.1□□□□□ -0.63
MCF2L2-204ENST00000459750 LRRCC1Q9C099 1032 aa11.1□□□□□ -0.63
MCF2L2-204ENST00000459750 NDUFB9Q9Y6M9 179 aa11.1□□□□□ -0.63
MCF2L2-204ENST00000459750 KIAA0232Q92628 1395 aa11.1□□□□□ -0.63
MCF2L2-204ENST00000459750 PXDNQ92626 1479 aa11.1□□□□□ -0.63
MCF2L2-204ENST00000459750 CCDC85AQ96PX6 553 aaPredicted RBP11.1□□□□□ -0.63
MCF2L2-204ENST00000459750 KIF2CQ99661 725 aa11.1□□□□□ -0.63
MCF2L2-204ENST00000459750 UPF3BQ9BZI7 483 aaKnown RBP11.1□□□□□ -0.63
MCF2L2-204ENST00000459750 SOS1Q07889 1333 aaPredicted RBP11.1□□□□□ -0.63
MCF2L2-204ENST00000459750 ZNF335Q9H4Z2 1342 aaPredicted RBP11.1□□□□□ -0.63
MCF2L2-204ENST00000459750 TOM1L2Q6ZVM7 507 aa11.1□□□□□ -0.63
MCF2L2-204ENST00000459750 DNAAF4Q8WXU2 420 aa11.1□□□□□ -0.63
MCF2L2-204ENST00000459750 PRDM11Q9NQV5 511 aa11.1□□□□□ -0.63
MCF2L2-204ENST00000459750 USP16Q9Y5T5 823 aa11.1□□□□□ -0.63
MCF2L2-204ENST00000459750 ADGRL3Q9HAR2 1447 aa11.09□□□□□ -0.63
MCF2L2-204ENST00000459750 AKAP4Q5JQC9 854 aa11.09□□□□□ -0.63
MCF2L2-204ENST00000459750 IL25Q9H293 177 aa11.09□□□□□ -0.63
MCF2L2-204ENST00000459750 ANTXR1Q9H6X2 564 aa11.09□□□□□ -0.63
MCF2L2-204ENST00000459750 CHMP3Q9Y3E7 222 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms