RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 MPRIPQ6WCQ1 1025 aa7.44□□□□□ -1.22
RNU1-88P-201ENST00000459274 UNC5CLQ8IV45 518 aa7.44□□□□□ -1.22
RNU1-88P-201ENST00000459274 CCDC136Q96JN2 1154 aa7.44□□□□□ -1.22
RNU1-88P-201ENST00000459274 THUMPD2Q9BTF0 503 aaKnown RBP7.44□□□□□ -1.22
RNU1-88P-201ENST00000459274 MBIPQ9NS73 344 aa7.44□□□□□ -1.22
RNU1-88P-201ENST00000459274 PPP4R2Q9NY27 417 aa7.44□□□□□ -1.22
RNU1-88P-201ENST00000459274 USP21Q9UK80 565 aa7.44□□□□□ -1.22
RNU1-88P-201ENST00000459274 CAMTA1Q9Y6Y1 1673 aa7.44□□□□□ -1.22
RNU1-88P-201ENST00000459274 ERVV-2B6SEH9 535 aa7.43□□□□□ -1.22
RNU1-88P-201ENST00000459274 CHL1O00533 1208 aa7.43□□□□□ -1.22
RNU1-88P-201ENST00000459274 PDE3AQ14432 1141 aa7.43□□□□□ -1.22
RNU1-88P-201ENST00000459274 HDAC5Q9UQL6 1122 aa7.43□□□□□ -1.22
RNU1-88P-201ENST00000459274 PLCH1Q4KWH8 1693 aa7.43□□□□□ -1.22
RNU1-88P-201ENST00000459274 SCN11AQ9UI33 1791 aa7.42□□□□□ -1.22
RNU1-88P-201ENST00000459274 PHKG2P15735 406 aa7.42□□□□□ -1.22
RNU1-88P-201ENST00000459274 HSPA1LP34931 641 aa7.42□□□□□ -1.22
RNU1-88P-201ENST00000459274 RARSP54136 660 aaKnown RBP7.42□□□□□ -1.22
RNU1-88P-201ENST00000459274 IRX6P78412 446 aaPredicted RBP7.42□□□□□ -1.22
RNU1-88P-201ENST00000459274 RBM42Q9BTD8 480 aaKnown RBP7.42□□□□□ -1.22
RNU1-88P-201ENST00000459274 API5Q9BZZ5 524 aaKnown RBP7.42□□□□□ -1.22
RNU1-88P-201ENST00000459274 TMOD3Q9NYL9 352 aa7.42□□□□□ -1.22
RNU1-88P-201ENST00000459274 ZBTB47Q9UFB7 747 aaPredicted RBP7.42□□□□□ -1.22
RNU1-88P-201ENST00000459274 OVOS2A0A0G2JMS6 1433 aa7.42□□□□□ -1.22
RNU1-88P-201ENST00000459274 DDX58O95786 925 aaKnown RBP7.41□□□□□ -1.22
RNU1-88P-201ENST00000459274 HOXB7P09629 217 aa7.41□□□□□ -1.22
RNU1-88P-201ENST00000459274 ZNF853P0CG23 659 aa7.41□□□□□ -1.22
RNU1-88P-201ENST00000459274 ZNF772Q68DY9 489 aaPredicted RBP7.41□□□□□ -1.22
RNU1-88P-201ENST00000459274 DZIP1LQ8IYY4 767 aaKnown RBP7.41□□□□□ -1.22
RNU1-88P-201ENST00000459274 NFATC2IPQ8NCF5 419 aa7.41□□□□□ -1.22
RNU1-88P-201ENST00000459274 IL17REQ8NFR9 667 aa7.41□□□□□ -1.22
RNU1-88P-201ENST00000459274 ARHGAP45Q92619 1136 aa7.41□□□□□ -1.22
RNU1-88P-201ENST00000459274 SYTL4Q96C24 671 aaPredicted RBP7.41□□□□□ -1.22
RNU1-88P-201ENST00000459274 FMNL2Q96PY5 1086 aa7.41□□□□□ -1.22
RNU1-88P-201ENST00000459274 TEX13AQ9BXU3 409 aaPredicted RBP7.41□□□□□ -1.22
RNU1-88P-201ENST00000459274 SLC52A2Q9HAB3 445 aa7.41□□□□□ -1.22
RNU1-88P-201ENST00000459274 TRPC5Q9UL62 973 aaPredicted RBP7.41□□□□□ -1.22
RNU1-88P-201ENST00000459274 BCAR3O75815 825 aa7.4□□□□□ -1.22
RNU1-88P-201ENST00000459274 SLC4A2P04920 1241 aa7.4□□□□□ -1.22
RNU1-88P-201ENST00000459274 EIF2S2P20042 333 aaKnown RBP7.4□□□□□ -1.22
RNU1-88P-201ENST00000459274 EVX2Q03828 476 aa7.4□□□□□ -1.22
RNU1-88P-201ENST00000459274 VPS72Q15906 364 aa7.4□□□□□ -1.22
RNU1-88P-201ENST00000459274 HDGFL1Q5TGJ6 251 aa7.4□□□□□ -1.22
RNU1-88P-201ENST00000459274 BARGINQ6ZT62 677 aa7.4□□□□□ -1.22
RNU1-88P-201ENST00000459274 BCL2L13Q9BXK5 485 aa7.4□□□□□ -1.22
RNU1-88P-201ENST00000459274 LGR6Q9HBX8 967 aa7.4□□□□□ -1.22
RNU1-88P-201ENST00000459274 SPINK5Q9NQ38 1064 aaPredicted RBP7.4□□□□□ -1.22
RNU1-88P-201ENST00000459274 MIS18AQ9NYP9 233 aa7.4□□□□□ -1.22
RNU1-88P-201ENST00000459274 DDX19BQ9UMR2 479 aa7.4□□□□□ -1.22
RNU1-88P-201ENST00000459274 SPATA31A1Q5TZJ5 1347 aa7.4□□□□□ -1.22
RNU1-88P-201ENST00000459274 PKD1L3Q7Z443 1732 aa7.4□□□□□ -1.23
RNU1-88P-201ENST00000459274 PTPRCP08575 1304 aa7.39□□□□□ -1.23
RNU1-88P-201ENST00000459274 SPATA31A5Q5VU36 1347 aa7.39□□□□□ -1.23
RNU1-88P-201ENST00000459274 SPATA31A7Q8IWB4 1347 aa7.39□□□□□ -1.23
RNU1-88P-201ENST00000459274 PLIN1O60240 522 aa7.39□□□□□ -1.23
RNU1-88P-201ENST00000459274 VAMP4O75379 141 aa7.39□□□□□ -1.23
RNU1-88P-201ENST00000459274 SNRPA1P09661 255 aaKnown RBP7.39□□□□□ -1.23
RNU1-88P-201ENST00000459274 ZNF790Q6PG37 636 aa7.39□□□□□ -1.23
RNU1-88P-201ENST00000459274 ATF7IPQ6VMQ6 1270 aa7.39□□□□□ -1.23
RNU1-88P-201ENST00000459274 ITPRIPQ8IWB1 547 aa7.39□□□□□ -1.23
RNU1-88P-201ENST00000459274 DBF4Q9UBU7 674 aaPredicted RBP7.39□□□□□ -1.23
RNU1-88P-201ENST00000459274 NOB1Q9ULX3 412 aaKnown RBP7.39□□□□□ -1.23
RNU1-88P-201ENST00000459274 CEMIPQ8WUJ3 1361 aa7.38□□□□□ -1.23
RNU1-88P-201ENST00000459274 NEXNQ0ZGT2 675 aa7.38□□□□□ -1.23
RNU1-88P-201ENST00000459274 FKBP5Q13451 457 aaPredicted RBP7.38□□□□□ -1.23
RNU1-88P-201ENST00000459274 FNBP4Q8N3X1 1017 aaPredicted RBP7.38□□□□□ -1.23
RNU1-88P-201ENST00000459274 C8orf58Q8NAV2 365 aa7.38□□□□□ -1.23
RNU1-88P-201ENST00000459274 SSH1Q8WYL5 1049 aa7.38□□□□□ -1.23
RNU1-88P-201ENST00000459274 SMARCC1Q92922 1105 aaPredicted RBP7.38□□□□□ -1.23
RNU1-88P-201ENST00000459274 CLUAP1Q96AJ1 413 aa7.38□□□□□ -1.23
RNU1-88P-201ENST00000459274 QTRT2Q9H974 415 aaKnown RBP7.38□□□□□ -1.23
RNU1-88P-201ENST00000459274 HYPKQ9NX55 129 aa7.38□□□□□ -1.23
RNU1-88P-201ENST00000459274 MEGF6O75095 1541 aa7.37□□□□□ -1.23
RNU1-88P-201ENST00000459274 AFF2P51816 1311 aa7.37□□□□□ -1.23
RNU1-88P-201ENST00000459274 RNF123Q5XPI4 1314 aa7.37□□□□□ -1.23
RNU1-88P-201ENST00000459274 CYP27B1O15528 508 aa7.37□□□□□ -1.23
RNU1-88P-201ENST00000459274 STARD3NLO95772 234 aa7.37□□□□□ -1.23
RNU1-88P-201ENST00000459274 BRPF1P55201 1214 aaPredicted RBP7.37□□□□□ -1.23
RNU1-88P-201ENST00000459274 EIF4A1P60842 406 aaKnown RBP7.37□□□□□ -1.23
RNU1-88P-201ENST00000459274 NKX1-1Q15270 411 aaPredicted RBP7.37□□□□□ -1.23
RNU1-88P-201ENST00000459274 FAM98CQ17RN3 349 aaKnown RBP7.37□□□□□ -1.23
RNU1-88P-201ENST00000459274 SLC4A10Q6U841 1118 aa7.37□□□□□ -1.23
RNU1-88P-201ENST00000459274 GJD4Q96KN9 370 aaPredicted RBP7.37□□□□□ -1.23
RNU1-88P-201ENST00000459274 ARXQ96QS3 562 aa7.37□□□□□ -1.23
RNU1-88P-201ENST00000459274 RWDD1Q9H446 243 aaPredicted RBP7.37□□□□□ -1.23
RNU1-88P-201ENST00000459274 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.37□□□□□ -1.23
RNU1-88P-201ENST00000459274 WNK3Q9BYP7 1800 aa7.36□□□□□ -1.23
RNU1-88P-201ENST00000459274 CCT4P50991 539 aaKnown RBP7.36□□□□□ -1.23
RNU1-88P-201ENST00000459274 TSPYL6Q8N831 410 aa7.36□□□□□ -1.23
RNU1-88P-201ENST00000459274 FBXO41Q8TF61 875 aa7.36□□□□□ -1.23
RNU1-88P-201ENST00000459274 NECTIN2Q92692 538 aa7.36□□□□□ -1.23
RNU1-88P-201ENST00000459274 COG6Q9Y2V7 657 aa7.36□□□□□ -1.23
RNU1-88P-201ENST00000459274 SLIT2O94813 1529 aa7.36□□□□□ -1.23
RNU1-88P-201ENST00000459274 ITGB4P16144 1822 aa7.36□□□□□ -1.23
RNU1-88P-201ENST00000459274 KDM3BQ7LBC6 1761 aa7.36□□□□□ -1.23
RNU1-88P-201ENST00000459274 TCERG1O14776 1098 aaKnown RBP7.35□□□□□ -1.23
RNU1-88P-201ENST00000459274 PTCD1O75127 700 aaKnown RBP7.35□□□□□ -1.23
RNU1-88P-201ENST00000459274 MVPQ14764 893 aaKnown RBP7.35□□□□□ -1.23
RNU1-88P-201ENST00000459274 RIC3Q7Z5B4 369 aa7.35□□□□□ -1.23
RNU1-88P-201ENST00000459274 MRPL50Q8N5N7 158 aaKnown RBP7.35□□□□□ -1.23
RNU1-88P-201ENST00000459274 CRBNQ96SW2 442 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms