RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 HTATSF1O43719 755 aaKnown RBP21.42■■□□□ 1.02
CD28-203ENST00000458610 TEFQ10587 303 aa21.42■■□□□ 1.02
CD28-203ENST00000458610 LY75O60449 1722 aa21.41■■□□□ 1.02
CD28-203ENST00000458610 MAPK8IP3Q9UPT6 1336 aa21.41■■□□□ 1.02
CD28-203ENST00000458610 ANP32CO43423 234 aa21.41■■□□□ 1.02
CD28-203ENST00000458610 WDR43Q15061 677 aaKnown RBP eCLIP21.41■■□□□ 1.02
CD28-203ENST00000458610 ZNF827Q17R98 1081 aa21.41■■□□□ 1.02
CD28-203ENST00000458610 FLAD1Q8NFF5 587 aa21.41■■□□□ 1.02
CD28-203ENST00000458610 RBM42Q9BTD8 480 aaKnown RBP21.41■■□□□ 1.02
CD28-203ENST00000458610 SPON1Q9HCB6 807 aa21.41■■□□□ 1.02
CD28-203ENST00000458610 IL17REQ8NFR9 667 aa21.39■■□□□ 1.01
CD28-203ENST00000458610 SLC16A10Q8TF71 515 aa21.39■■□□□ 1.01
CD28-203ENST00000458610 AK7Q96M32 723 aa21.38■■□□□ 1.01
CD28-203ENST00000458610 PLEKHF1Q96S99 279 aa21.37■■□□□ 1.01
CD28-203ENST00000458610 PTCD1O75127 700 aaKnown RBP21.36■■□□□ 1.01
CD28-203ENST00000458610 TTC5Q8N0Z6 440 aa21.36■■□□□ 1.01
CD28-203ENST00000458610 MTFR1LQ9H019 292 aa21.36■■□□□ 1.01
CD28-203ENST00000458610 PAPPAQ13219 1627 aa21.36■■□□□ 1.01
CD28-203ENST00000458610 SCN11AQ9UI33 1791 aa21.35■■□□□ 1.01
CD28-203ENST00000458610 MSH5O43196 834 aa21.34■■□□□ 1.01
CD28-203ENST00000458610 ITPK1Q13572 414 aa21.34■■□□□ 1.01
CD28-203ENST00000458610 NFE2L2Q16236 605 aa21.34■■□□□ 1.01
CD28-203ENST00000458610 MRC1P22897 1456 aa21.33■■□□□ 1.01
CD28-203ENST00000458610 PNPLA7Q6ZV29 1317 aa21.33■■□□□ 1.01
CD28-203ENST00000458610 ZBTB7AO95365 584 aa21.33■■□□□ 1.01
CD28-203ENST00000458610 RC3H1Q5TC82 1133 aaKnown RBP21.33■■□□□ 1.01
CD28-203ENST00000458610 LINC00116Q8NCU8 138 aa21.33■■□□□ 1.01
CD28-203ENST00000458610 PPP1R1BQ9UD71 204 aaPredicted RBP21.33■■□□□ 1.01
CD28-203ENST00000458610 CEMIPQ8WUJ3 1361 aa21.33■■□□□ 1
CD28-203ENST00000458610 PDGFDQ9GZP0 370 aaPredicted RBP21.32■■□□□ 1
CD28-203ENST00000458610 BTBD11A6QL63 1104 aa21.31■■□□□ 1
CD28-203ENST00000458610 SLC39A6Q13433 755 aa21.31■■□□□ 1
CD28-203ENST00000458610 VSIG10Q8N0Z9 540 aa21.31■■□□□ 1
CD28-203ENST00000458610 RUNDC1Q96C34 613 aa21.31■■□□□ 1
CD28-203ENST00000458610 SLC4A9Q96Q91 983 aa21.31■■□□□ 1
CD28-203ENST00000458610 ATF5Q9Y2D1 282 aaPredicted RBP21.31■■□□□ 1
CD28-203ENST00000458610 SSFA2P28290 1259 aa21.3■■□□□ 1
CD28-203ENST00000458610 LMOD3Q0VAK6 560 aa21.3■■□□□ 1
CD28-203ENST00000458610 ZNF790Q6PG37 636 aa21.3■■□□□ 1
CD28-203ENST00000458610 MCM10Q7L590 875 aa21.3■■□□□ 1
CD28-203ENST00000458610 COL23A1Q86Y22 540 aaPredicted RBP21.3■■□□□ 1
CD28-203ENST00000458610 ADAMTS8Q9UP79 889 aa21.3■■□□□ 1
CD28-203ENST00000458610 ADAMTS7Q9UKP4 1686 aa21.3■■□□□ 1
CD28-203ENST00000458610 LRP5O75197 1615 aa21.29■■□□□ 1
CD28-203ENST00000458610 GNPATO15228 680 aa21.29■■□□□ 1
CD28-203ENST00000458610 PNISRQ8TF01 805 aaKnown RBP21.29■■□□□ 1
CD28-203ENST00000458610 TEX13AQ9BXU3 409 aaPredicted RBP21.29■■□□□ 1
CD28-203ENST00000458610 RTCBQ9Y3I0 505 aaKnown RBP21.29■■□□□ 1
CD28-203ENST00000458610 CNTNAP4Q9C0A0 1308 aa21.29■■□□□ 1
CD28-203ENST00000458610 C5P01031 1676 aa21.28■■□□□ 1
CD28-203ENST00000458610 POLD1P28340 1107 aa21.28■■□□□ 1
CD28-203ENST00000458610 RIPK4P57078 832 aa21.28■■□□□ 1
CD28-203ENST00000458610 TAF7Q15545 349 aaPredicted RBP21.28■■□□□ 1
CD28-203ENST00000458610 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.27■■□□□ 1
CD28-203ENST00000458610 ADRA2BP18089 450 aa21.27■■□□□ 1
CD28-203ENST00000458610 TRAPPC3LQ5T215 181 aa21.27■■□□□ 1
CD28-203ENST00000458610 FMNL2Q96PY5 1086 aa21.27■■□□□ 1
CD28-203ENST00000458610 ZNF831Q5JPB2 1677 aa21.27■■□□□ 1
CD28-203ENST00000458610 CASZ1Q86V15 1759 aa21.26■□□□□ 0.99
CD28-203ENST00000458610 RPS6KA4O75676 772 aa21.26■□□□□ 0.99
CD28-203ENST00000458610 PHF14O94880 888 aa21.26■□□□□ 0.99
CD28-203ENST00000458610 STARD3NLO95772 234 aa21.26■□□□□ 0.99
CD28-203ENST00000458610 TMPOP42166 694 aaKnown RBP21.26■□□□□ 0.99
CD28-203ENST00000458610 DCTN1Q14203 1278 aa21.26■□□□□ 0.99
CD28-203ENST00000458610 C4BP0C0L5 1744 aa21.26■□□□□ 0.99
CD28-203ENST00000458610 DNAJC10Q8IXB1 793 aa21.25■□□□□ 0.99
CD28-203ENST00000458610 QSER1Q2KHR3 1735 aa21.24■□□□□ 0.99
CD28-203ENST00000458610 CRKLP46109 303 aaKnown RBP21.24■□□□□ 0.99
CD28-203ENST00000458610 CCDC146Q8IYE0 955 aa21.24■□□□□ 0.99
CD28-203ENST00000458610 ZNF496Q96IT1 587 aaPredicted RBP21.24■□□□□ 0.99
CD28-203ENST00000458610 TAF1LQ8IZX4 1826 aa21.24■□□□□ 0.99
CD28-203ENST00000458610 PTGER2P43116 358 aa21.23■□□□□ 0.99
CD28-203ENST00000458610 MRS2Q9HD23 443 aa21.23■□□□□ 0.99
CD28-203ENST00000458610 CYP19A1P11511 503 aaPredicted RBP21.22■□□□□ 0.99
CD28-203ENST00000458610 CCDC87Q9NVE4 849 aa21.22■□□□□ 0.99
CD28-203ENST00000458610 HEG1Q9ULI3 1381 aa21.22■□□□□ 0.99
CD28-203ENST00000458610 RFC4P35249 363 aa21.21■□□□□ 0.99
CD28-203ENST00000458610 NEUROD2Q15784 382 aa21.21■□□□□ 0.99
CD28-203ENST00000458610 ARXQ96QS3 562 aa21.21■□□□□ 0.99
CD28-203ENST00000458610 SGIP1Q9BQI5 828 aa21.2■□□□□ 0.98
CD28-203ENST00000458610 BABAM1Q9NWV8 329 aa21.2■□□□□ 0.98
CD28-203ENST00000458610 KCPQ6ZWJ8 1503 aa21.19■□□□□ 0.98
CD28-203ENST00000458610 SNRPA1P09661 255 aaKnown RBP21.19■□□□□ 0.98
CD28-203ENST00000458610 INTS5Q6P9B9 1019 aaKnown RBP21.19■□□□□ 0.98
CD28-203ENST00000458610 ARHGEF1Q92888 912 aaKnown RBP21.19■□□□□ 0.98
CD28-203ENST00000458610 VIRMAQ69YN4 1812 aaKnown RBP21.18■□□□□ 0.98
CD28-203ENST00000458610 NPM2Q86SE8 214 aaKnown RBP21.18■□□□□ 0.98
CD28-203ENST00000458610 NLGN1Q8N2Q7 840 aa21.18■□□□□ 0.98
CD28-203ENST00000458610 RRP7AQ9Y3A4 280 aaKnown RBP21.18■□□□□ 0.98
CD28-203ENST00000458610 KCNQ3O43525 872 aa21.17■□□□□ 0.98
CD28-203ENST00000458610 CCDC184Q52MB2 194 aa21.17■□□□□ 0.98
CD28-203ENST00000458610 AMIGO3Q86WK7 504 aa21.17■□□□□ 0.98
CD28-203ENST00000458610 SMIM5Q71RC9 77 aa21.16■□□□□ 0.98
CD28-203ENST00000458610 THUMPD2Q9BTF0 503 aaKnown RBP21.16■□□□□ 0.98
CD28-203ENST00000458610 MIS18AQ9NYP9 233 aa21.16■□□□□ 0.98
CD28-203ENST00000458610 CICQ96RK0 1608 aaPredicted RBP21.15■□□□□ 0.98
CD28-203ENST00000458610 A0A087WZG4 1122 aa21.15■□□□□ 0.98
CD28-203ENST00000458610 DCAF8L1A6NGE4 600 aa21.15■□□□□ 0.98
CD28-203ENST00000458610 CALD1Q05682 793 aaKnown RBP21.15■□□□□ 0.98
CD28-203ENST00000458610 MSL1Q68DK7 614 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms