RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 COL18A1P39060 1754 aa11.71□□□□□ -0.54
VPS50-207ENST00000458530 DLG5Q8TDM6 1919 aa11.7□□□□□ -0.54
VPS50-207ENST00000458530 CCDC27Q2M243 656 aa11.7□□□□□ -0.54
VPS50-207ENST00000458530 MARCH10Q8NA82 808 aaPredicted RBP11.7□□□□□ -0.54
VPS50-207ENST00000458530 FHDC1Q9C0D6 1143 aaPredicted RBP11.7□□□□□ -0.54
VPS50-207ENST00000458530 SALL2Q9Y467 1007 aaPredicted RBP11.7□□□□□ -0.54
VPS50-207ENST00000458530 FAM208AQ9UK61 1670 aaKnown RBP11.7□□□□□ -0.54
VPS50-207ENST00000458530 WNK3Q9BYP7 1800 aa11.7□□□□□ -0.54
VPS50-207ENST00000458530 MAP3K19Q56UN5 1328 aa11.69□□□□□ -0.54
VPS50-207ENST00000458530 ZNF521Q96K83 1311 aa11.69□□□□□ -0.54
VPS50-207ENST00000458530 PAPPAQ13219 1627 aa11.69□□□□□ -0.54
VPS50-207ENST00000458530 SENP3-EIF4A1A0A087X0R7 540 aa11.69□□□□□ -0.54
VPS50-207ENST00000458530 IL13P35225 146 aa11.69□□□□□ -0.54
VPS50-207ENST00000458530 SLC15A2Q16348 729 aa11.69□□□□□ -0.54
VPS50-207ENST00000458530 MTFR1LQ9H019 292 aa11.69□□□□□ -0.54
VPS50-207ENST00000458530 E9PSI1 815 aa11.68□□□□□ -0.54
VPS50-207ENST00000458530 DDB1Q16531 1140 aa11.68□□□□□ -0.54
VPS50-207ENST00000458530 CEP350Q5VT06 3117 aa11.67□□□□□ -0.54
VPS50-207ENST00000458530 SOX12O15370 315 aa11.67□□□□□ -0.54
VPS50-207ENST00000458530 LMOD3Q0VAK6 560 aa11.67□□□□□ -0.54
VPS50-207ENST00000458530 TXNRD1Q16881 649 aa11.67□□□□□ -0.54
VPS50-207ENST00000458530 WDR63Q8IWG1 891 aa11.67□□□□□ -0.54
VPS50-207ENST00000458530 CDCA7Q9BWT1 371 aaPredicted RBP11.67□□□□□ -0.54
VPS50-207ENST00000458530 RSPH6AQ9H0K4 717 aa11.67□□□□□ -0.54
VPS50-207ENST00000458530 WDR17Q8IZU2 1322 aa11.66□□□□□ -0.54
VPS50-207ENST00000458530 VASPP50552 380 aaPredicted RBP11.66□□□□□ -0.54
VPS50-207ENST00000458530 CALD1Q05682 793 aaKnown RBP11.66□□□□□ -0.54
VPS50-207ENST00000458530 EIF4A2Q14240 407 aaKnown RBP11.66□□□□□ -0.54
VPS50-207ENST00000458530 DCBLD2Q96PD2 775 aa11.66□□□□□ -0.54
VPS50-207ENST00000458530 PLEKHF1Q96S99 279 aa11.66□□□□□ -0.54
VPS50-207ENST00000458530 FBLN1P23142 703 aa11.65□□□□□ -0.54
VPS50-207ENST00000458530 HOXC9P31274 260 aa11.65□□□□□ -0.54
VPS50-207ENST00000458530 PRKAR2BP31323 418 aa11.65□□□□□ -0.54
VPS50-207ENST00000458530 CLCN6P51797 869 aa11.65□□□□□ -0.54
VPS50-207ENST00000458530 NUBP1P53384 320 aa11.65□□□□□ -0.54
VPS50-207ENST00000458530 ERICH6BQ5W0A0 696 aa11.65□□□□□ -0.54
VPS50-207ENST00000458530 WWC1Q8IX03 1113 aa11.65□□□□□ -0.54
VPS50-207ENST00000458530 MS4A3Q96HJ5 214 aa11.65□□□□□ -0.54
VPS50-207ENST00000458530 STK32BQ9NY57 414 aa11.65□□□□□ -0.54
VPS50-207ENST00000458530 AXIN2Q9Y2T1 843 aa11.65□□□□□ -0.54
VPS50-207ENST00000458530 SUPT16HQ9Y5B9 1047 aaKnown RBP11.65□□□□□ -0.54
VPS50-207ENST00000458530 COL24A1Q17RW2 1714 aa11.65□□□□□ -0.54
VPS50-207ENST00000458530 TMPOP42166 694 aaKnown RBP11.64□□□□□ -0.55
VPS50-207ENST00000458530 SLFN5Q08AF3 891 aa11.64□□□□□ -0.55
VPS50-207ENST00000458530 MYH16Q9H6N6 1097 aa11.64□□□□□ -0.55
VPS50-207ENST00000458530 RGPD5Q99666 1765 aa11.64□□□□□ -0.55
VPS50-207ENST00000458530 IL16Q14005 1332 aa11.63□□□□□ -0.55
VPS50-207ENST00000458530 NHSQ6T4R5 1651 aa11.63□□□□□ -0.55
VPS50-207ENST00000458530 NEUROD2Q15784 382 aa11.63□□□□□ -0.55
VPS50-207ENST00000458530 NFE2L2Q16236 605 aa11.63□□□□□ -0.55
VPS50-207ENST00000458530 HSP90AB2PQ58FF8 381 aa11.63□□□□□ -0.55
VPS50-207ENST00000458530 IP6K1Q92551 441 aa11.63□□□□□ -0.55
VPS50-207ENST00000458530 ARXQ96QS3 562 aa11.63□□□□□ -0.55
VPS50-207ENST00000458530 CARD10Q9BWT7 1032 aa11.63□□□□□ -0.55
VPS50-207ENST00000458530 RCAN3Q9UKA8 241 aa11.63□□□□□ -0.55
VPS50-207ENST00000458530 KDRP35968 1356 aa11.63□□□□□ -0.55
VPS50-207ENST00000458530 SHANK3Q9BYB0 1731 aa11.63□□□□□ -0.55
VPS50-207ENST00000458530 IGSF1Q8N6C5 1336 aa11.62□□□□□ -0.55
VPS50-207ENST00000458530 TNS2Q63HR2 1409 aa11.62□□□□□ -0.55
VPS50-207ENST00000458530 HMOX1P09601 288 aa11.62□□□□□ -0.55
VPS50-207ENST00000458530 TOM1L2Q6ZVM7 507 aa11.62□□□□□ -0.55
VPS50-207ENST00000458530 ARHGEF25Q86VW2 580 aa11.62□□□□□ -0.55
VPS50-207ENST00000458530 ZBTB47Q9UFB7 747 aaPredicted RBP11.62□□□□□ -0.55
VPS50-207ENST00000458530 RGPD2P0DJD1 1756 aa11.62□□□□□ -0.55
VPS50-207ENST00000458530 RIPK4P57078 832 aa11.61□□□□□ -0.55
VPS50-207ENST00000458530 DUSP27Q5VZP5 1158 aa11.61□□□□□ -0.55
VPS50-207ENST00000458530 SULT6B1Q6IMI4 303 aa11.61□□□□□ -0.55
VPS50-207ENST00000458530 CDCA7LQ96GN5 454 aa11.61□□□□□ -0.55
VPS50-207ENST00000458530 RRP7AQ9Y3A4 280 aaKnown RBP11.61□□□□□ -0.55
VPS50-207ENST00000458530 GOLGB1Q14789 3259 aaKnown RBP11.6□□□□□ -0.55
VPS50-207ENST00000458530 TRMT2AQ8IZ69 625 aaKnown RBP11.6□□□□□ -0.55
VPS50-207ENST00000458530 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.6□□□□□ -0.55
VPS50-207ENST00000458530 RNF123Q5XPI4 1314 aa11.6□□□□□ -0.55
VPS50-207ENST00000458530 VIRMAQ69YN4 1812 aaKnown RBP11.59□□□□□ -0.55
VPS50-207ENST00000458530 GIGYF1O75420 1035 aaPredicted RBP11.59□□□□□ -0.55
VPS50-207ENST00000458530 CT47B1P0C2W7 299 aaPredicted RBP11.59□□□□□ -0.55
VPS50-207ENST00000458530 ZNF827Q17R98 1081 aa11.59□□□□□ -0.55
VPS50-207ENST00000458530 GAS2L2Q8NHY3 880 aa11.59□□□□□ -0.55
VPS50-207ENST00000458530 QSER1Q2KHR3 1735 aa11.59□□□□□ -0.55
VPS50-207ENST00000458530 PLEKHG2Q9H7P9 1386 aa11.58□□□□□ -0.56
VPS50-207ENST00000458530 ZBTB7CA1YPR0 619 aa11.58□□□□□ -0.56
VPS50-207ENST00000458530 KIF12Q96FN5 646 aa11.58□□□□□ -0.56
VPS50-207ENST00000458530 EYA1Q99502 592 aa11.58□□□□□ -0.56
VPS50-207ENST00000458530 LRRC4BQ9NT99 713 aa11.58□□□□□ -0.56
VPS50-207ENST00000458530 EXOC5O00471 708 aa11.57□□□□□ -0.56
VPS50-207ENST00000458530 RRP1P56182 461 aaKnown RBP11.57□□□□□ -0.56
VPS50-207ENST00000458530 PELP1Q8IZL8 1130 aaKnown RBP11.57□□□□□ -0.56
VPS50-207ENST00000458530 KLHL34Q8N239 644 aa11.57□□□□□ -0.56
VPS50-207ENST00000458530 SLC16A10Q8TF71 515 aa11.57□□□□□ -0.56
VPS50-207ENST00000458530 TRIM35Q9UPQ4 493 aa11.57□□□□□ -0.56
VPS50-207ENST00000458530 NCAPD2Q15021 1401 aa11.57□□□□□ -0.56
VPS50-207ENST00000458530 MAP3K13O43283 966 aa11.56□□□□□ -0.56
VPS50-207ENST00000458530 GNAI1P63096 354 aa11.56□□□□□ -0.56
VPS50-207ENST00000458530 LTV1Q96GA3 475 aaPredicted RBP11.56□□□□□ -0.56
VPS50-207ENST00000458530 BTAF1O14981 1849 aa11.56□□□□□ -0.56
VPS50-207ENST00000458530 HTATSF1O43719 755 aaKnown RBP11.55□□□□□ -0.56
VPS50-207ENST00000458530 AEBP1Q8IUX7 1158 aa11.55□□□□□ -0.56
VPS50-207ENST00000458530 RTF1Q92541 710 aaKnown RBP11.55□□□□□ -0.56
VPS50-207ENST00000458530 PHACTR3Q96KR7 559 aa11.55□□□□□ -0.56
VPS50-207ENST00000458530 TRPC6Q9Y210 931 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms