RNA–Protein interactions for RNA: ENST00000458337.5

COMMD1-206, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-206ENST00000458337 SLC16A10Q8TF71 515 aa17.84■□□□□ 0.45
COMMD1-206ENST00000458337 MTFR1LQ9H019 292 aa17.84■□□□□ 0.45
COMMD1-206ENST00000458337 ZBTB7AO95365 584 aa17.83■□□□□ 0.44
COMMD1-206ENST00000458337 PRKAR2BP31323 418 aa17.83■□□□□ 0.44
COMMD1-206ENST00000458337 PTGER2P43116 358 aa17.83■□□□□ 0.44
COMMD1-206ENST00000458337 GAS2L2Q8NHY3 880 aa17.83■□□□□ 0.44
COMMD1-206ENST00000458337 SLC52A2Q9HAB3 445 aa17.83■□□□□ 0.44
COMMD1-206ENST00000458337 ITPK1Q13572 414 aa17.82■□□□□ 0.44
COMMD1-206ENST00000458337 SLC4A9Q96Q91 983 aa17.82■□□□□ 0.44
COMMD1-206ENST00000458337 SGIP1Q9BQI5 828 aa17.82■□□□□ 0.44
COMMD1-206ENST00000458337 ADAMTS7Q9UKP4 1686 aa17.82■□□□□ 0.44
COMMD1-206ENST00000458337 C5P01031 1676 aa17.81■□□□□ 0.44
COMMD1-206ENST00000458337 GNAT3A8MTJ3 354 aa17.81■□□□□ 0.44
COMMD1-206ENST00000458337 ATP6V1AP38606 617 aa17.81■□□□□ 0.44
COMMD1-206ENST00000458337 ATF5Q9Y2D1 282 aaPredicted RBP17.81■□□□□ 0.44
COMMD1-206ENST00000458337 ZNF831Q5JPB2 1677 aa17.8■□□□□ 0.44
COMMD1-206ENST00000458337 LINC00116Q8NCU8 138 aa17.8■□□□□ 0.44
COMMD1-206ENST00000458337 FLAD1Q8NFF5 587 aa17.8■□□□□ 0.44
COMMD1-206ENST00000458337 IL17REQ8NFR9 667 aa17.8■□□□□ 0.44
COMMD1-206ENST00000458337 TUBGCP6Q96RT7 1819 aa17.79■□□□□ 0.44
COMMD1-206ENST00000458337 COL23A1Q86Y22 540 aaPredicted RBP17.79■□□□□ 0.44
COMMD1-206ENST00000458337 MAP3K5Q99683 1374 aa17.79■□□□□ 0.44
COMMD1-206ENST00000458337 C4BP0C0L5 1744 aa17.78■□□□□ 0.44
COMMD1-206ENST00000458337 MYBBP1AQ9BQG0 1328 aaKnown RBP17.78■□□□□ 0.44
COMMD1-206ENST00000458337 MRC1P22897 1456 aa17.78■□□□□ 0.44
COMMD1-206ENST00000458337 VIRMAQ69YN4 1812 aaKnown RBP17.78■□□□□ 0.44
COMMD1-206ENST00000458337 RBM42Q9BTD8 480 aaKnown RBP17.78■□□□□ 0.44
COMMD1-206ENST00000458337 ZNF316A6NFI3 1004 aaPredicted RBP17.77■□□□□ 0.44
COMMD1-206ENST00000458337 RC3H1Q5TC82 1133 aaKnown RBP17.77■□□□□ 0.44
COMMD1-206ENST00000458337 PLEKHF1Q96S99 279 aa17.77■□□□□ 0.44
COMMD1-206ENST00000458337 PRKRIP1Q9H875 184 aaPredicted RBP17.77■□□□□ 0.44
COMMD1-206ENST00000458337 COL24A1Q17RW2 1714 aa17.76■□□□□ 0.43
COMMD1-206ENST00000458337 PTCD1O75127 700 aaKnown RBP17.76■□□□□ 0.43
COMMD1-206ENST00000458337 AMIGO3Q86WK7 504 aa17.76■□□□□ 0.43
COMMD1-206ENST00000458337 AK7Q96M32 723 aa17.76■□□□□ 0.43
COMMD1-206ENST00000458337 CEMIPQ8WUJ3 1361 aa17.76■□□□□ 0.43
COMMD1-206ENST00000458337 HTATSF1O43719 755 aaKnown RBP17.75■□□□□ 0.43
COMMD1-206ENST00000458337 PPP1R1BQ9UD71 204 aaPredicted RBP17.75■□□□□ 0.43
COMMD1-206ENST00000458337 UBR3Q6ZT12 1888 aa17.74■□□□□ 0.43
COMMD1-206ENST00000458337 SSFA2P28290 1259 aa17.74■□□□□ 0.43
COMMD1-206ENST00000458337 PNNQ9H307 717 aaKnown RBP17.74■□□□□ 0.43
COMMD1-206ENST00000458337 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.73■□□□□ 0.43
COMMD1-206ENST00000458337 SLC39A6Q13433 755 aa17.73■□□□□ 0.43
COMMD1-206ENST00000458337 CNTNAP4Q9C0A0 1308 aa17.72■□□□□ 0.43
COMMD1-206ENST00000458337 TEFQ10587 303 aa17.72■□□□□ 0.43
COMMD1-206ENST00000458337 VSIG10Q8N0Z9 540 aa17.72■□□□□ 0.43
COMMD1-206ENST00000458337 MYH14Q7Z406 1995 aaKnown RBP17.71■□□□□ 0.43
COMMD1-206ENST00000458337 GNPATO15228 680 aa17.71■□□□□ 0.43
COMMD1-206ENST00000458337 MSH5O43196 834 aa17.71■□□□□ 0.43
COMMD1-206ENST00000458337 RPS6KA4O75676 772 aa17.71■□□□□ 0.43
COMMD1-206ENST00000458337 SMIM5Q71RC9 77 aa17.71■□□□□ 0.43
COMMD1-206ENST00000458337 ARXQ96QS3 562 aa17.71■□□□□ 0.43
COMMD1-206ENST00000458337 CICQ96RK0 1608 aaPredicted RBP17.71■□□□□ 0.43
COMMD1-206ENST00000458337 COL5A3P25940 1745 aaPredicted RBP17.7■□□□□ 0.42
COMMD1-206ENST00000458337 ZNF790Q6PG37 636 aa17.7■□□□□ 0.42
COMMD1-206ENST00000458337 RTCBQ9Y3I0 505 aaKnown RBP17.7■□□□□ 0.42
COMMD1-206ENST00000458337 SIPA1L3O60292 1781 aaPredicted RBP17.7■□□□□ 0.42
COMMD1-206ENST00000458337 KCPQ6ZWJ8 1503 aa17.69■□□□□ 0.42
COMMD1-206ENST00000458337 NEFMP07197 916 aa17.69■□□□□ 0.42
COMMD1-206ENST00000458337 ADRA2BP18089 450 aa17.69■□□□□ 0.42
COMMD1-206ENST00000458337 POLD1P28340 1107 aa17.69■□□□□ 0.42
COMMD1-206ENST00000458337 TRAPPC3LQ5T215 181 aa17.69■□□□□ 0.42
COMMD1-206ENST00000458337 RTF1Q92541 710 aaKnown RBP17.69■□□□□ 0.42
COMMD1-206ENST00000458337 CRKLP46109 303 aaKnown RBP17.68■□□□□ 0.42
COMMD1-206ENST00000458337 NFE2L2Q16236 605 aa17.68■□□□□ 0.42
COMMD1-206ENST00000458337 INTS5Q6P9B9 1019 aaKnown RBP17.68■□□□□ 0.42
COMMD1-206ENST00000458337 MCM10Q7L590 875 aa17.68■□□□□ 0.42
COMMD1-206ENST00000458337 DNAJC10Q8IXB1 793 aa17.68■□□□□ 0.42
COMMD1-206ENST00000458337 SYT17Q9BSW7 474 aa17.68■□□□□ 0.42
COMMD1-206ENST00000458337 PHF14O94880 888 aa17.67■□□□□ 0.42
COMMD1-206ENST00000458337 CYP19A1P11511 503 aaPredicted RBP17.67■□□□□ 0.42
COMMD1-206ENST00000458337 TTC5Q8N0Z6 440 aa17.67■□□□□ 0.42
COMMD1-206ENST00000458337 ARHGEF1Q92888 912 aaKnown RBP17.67■□□□□ 0.42
COMMD1-206ENST00000458337 ZNF496Q96IT1 587 aaPredicted RBP17.67■□□□□ 0.42
COMMD1-206ENST00000458337 FHDC1Q9C0D6 1143 aaPredicted RBP17.67■□□□□ 0.42
COMMD1-206ENST00000458337 TJP1Q07157 1748 aa17.67■□□□□ 0.42
COMMD1-206ENST00000458337 UBR2Q8IWV8 1755 aa17.66■□□□□ 0.42
COMMD1-206ENST00000458337 BTBD11A6QL63 1104 aa17.66■□□□□ 0.42
COMMD1-206ENST00000458337 DCTN1Q14203 1278 aa17.66■□□□□ 0.42
COMMD1-206ENST00000458337 TAF7Q15545 349 aaPredicted RBP17.65■□□□□ 0.42
COMMD1-206ENST00000458337 TEX13AQ9BXU3 409 aaPredicted RBP17.65■□□□□ 0.42
COMMD1-206ENST00000458337 DLG5Q8TDM6 1919 aa17.64■□□□□ 0.42
COMMD1-206ENST00000458337 KCNQ3O43525 872 aa17.64■□□□□ 0.41
COMMD1-206ENST00000458337 MSL1Q68DK7 614 aa17.64■□□□□ 0.41
COMMD1-206ENST00000458337 CCDC87Q9NVE4 849 aa17.64■□□□□ 0.41
COMMD1-206ENST00000458337 ADAMTS8Q9UP79 889 aa17.64■□□□□ 0.41
COMMD1-206ENST00000458337 MAPK8IP3Q9UPT6 1336 aa17.64■□□□□ 0.41
COMMD1-206ENST00000458337 HEG1Q9ULI3 1381 aa17.64■□□□□ 0.41
COMMD1-206ENST00000458337 FMNL2Q96PY5 1086 aa17.63■□□□□ 0.41
COMMD1-206ENST00000458337 RFC4P35249 363 aa17.62■□□□□ 0.41
COMMD1-206ENST00000458337 TMPOP42166 694 aaKnown RBP17.62■□□□□ 0.41
COMMD1-206ENST00000458337 NLGN1Q8N2Q7 840 aa17.62■□□□□ 0.41
COMMD1-206ENST00000458337 STARD3NLO95772 234 aa17.61■□□□□ 0.41
COMMD1-206ENST00000458337 GYS1P13807 737 aa17.61■□□□□ 0.41
COMMD1-206ENST00000458337 WDR43Q15061 677 aaKnown RBP eCLIP17.61■□□□□ 0.41
COMMD1-206ENST00000458337 RUNDC1Q96C34 613 aa17.61■□□□□ 0.41
COMMD1-206ENST00000458337 SOS1Q07889 1333 aaPredicted RBP17.61■□□□□ 0.41
COMMD1-206ENST00000458337 RIPK4P57078 832 aa17.6■□□□□ 0.41
COMMD1-206ENST00000458337 PNISRQ8TF01 805 aaKnown RBP17.6■□□□□ 0.41
COMMD1-206ENST00000458337 ZBTB1Q9Y2K1 713 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms