RNA–Protein interactions for RNA: ENST00000458271.6

CSRP1-203, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 2

Gene CSRP1, Length 1,324 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-203ENST00000458271 MTHFSDQ2M296 383 aaKnown RBP16.7■□□□□ 0.26
CSRP1-203ENST00000458271 MRC1P22897 1456 aa16.7■□□□□ 0.26
CSRP1-203ENST00000458271 ZNF831Q5JPB2 1677 aa16.7■□□□□ 0.26
CSRP1-203ENST00000458271 ZEB1P37275 1124 aaPredicted RBP16.7■□□□□ 0.26
CSRP1-203ENST00000458271 PTGER2P43116 358 aa16.7■□□□□ 0.26
CSRP1-203ENST00000458271 UBR3Q6ZT12 1888 aa16.69■□□□□ 0.26
CSRP1-203ENST00000458271 COL5A3P25940 1745 aaPredicted RBP16.69■□□□□ 0.26
CSRP1-203ENST00000458271 NUDCQ9Y266 331 aa16.69■□□□□ 0.26
CSRP1-203ENST00000458271 COL24A1Q17RW2 1714 aa16.68■□□□□ 0.26
CSRP1-203ENST00000458271 HMGB2P26583 209 aaKnown RBP16.68■□□□□ 0.26
CSRP1-203ENST00000458271 ITPK1Q13572 414 aa16.68■□□□□ 0.26
CSRP1-203ENST00000458271 NFATC2IPQ8NCF5 419 aa16.68■□□□□ 0.26
CSRP1-203ENST00000458271 LINC00116Q8NCU8 138 aa16.68■□□□□ 0.26
CSRP1-203ENST00000458271 RSPH6AQ9H0K4 717 aa16.68■□□□□ 0.26
CSRP1-203ENST00000458271 LGR6Q9HBX8 967 aa16.68■□□□□ 0.26
CSRP1-203ENST00000458271 U2AF1L5P0DN76 240 aaPredicted RBP16.67■□□□□ 0.26
CSRP1-203ENST00000458271 PRKAR2BP31323 418 aa16.67■□□□□ 0.26
CSRP1-203ENST00000458271 ATP6V1AP38606 617 aa16.67■□□□□ 0.26
CSRP1-203ENST00000458271 U2AF1Q01081 240 aaKnown RBP eCLIP16.67■□□□□ 0.26
CSRP1-203ENST00000458271 AK7Q96M32 723 aa16.67■□□□□ 0.26
CSRP1-203ENST00000458271 SGIP1Q9BQI5 828 aa16.67■□□□□ 0.26
CSRP1-203ENST00000458271 MAP3K5Q99683 1374 aa16.66■□□□□ 0.26
CSRP1-203ENST00000458271 RNMTO43148 476 aaKnown RBP16.66■□□□□ 0.26
CSRP1-203ENST00000458271 COL23A1Q86Y22 540 aaPredicted RBP16.66■□□□□ 0.26
CSRP1-203ENST00000458271 SLC16A10Q8TF71 515 aa16.66■□□□□ 0.26
CSRP1-203ENST00000458271 RBM42Q9BTD8 480 aaKnown RBP16.66■□□□□ 0.26
CSRP1-203ENST00000458271 SLC52A2Q9HAB3 445 aa16.66■□□□□ 0.26
CSRP1-203ENST00000458271 TJP1Q07157 1748 aa16.65■□□□□ 0.26
CSRP1-203ENST00000458271 CICQ96RK0 1608 aaPredicted RBP16.65■□□□□ 0.26
CSRP1-203ENST00000458271 AMIGO3Q86WK7 504 aa16.65■□□□□ 0.26
CSRP1-203ENST00000458271 PHACTR3Q96KR7 559 aa16.65■□□□□ 0.26
CSRP1-203ENST00000458271 SLC4A9Q96Q91 983 aa16.65■□□□□ 0.26
CSRP1-203ENST00000458271 PTCD1O75127 700 aaKnown RBP16.64■□□□□ 0.25
CSRP1-203ENST00000458271 GAS2L2Q8NHY3 880 aa16.64■□□□□ 0.25
CSRP1-203ENST00000458271 SIPA1L3O60292 1781 aaPredicted RBP16.63■□□□□ 0.25
CSRP1-203ENST00000458271 PHF14O94880 888 aa16.63■□□□□ 0.25
CSRP1-203ENST00000458271 RALBP1Q15311 655 aa16.63■□□□□ 0.25
CSRP1-203ENST00000458271 SMIM5Q71RC9 77 aa16.63■□□□□ 0.25
CSRP1-203ENST00000458271 GNAT3A8MTJ3 354 aa16.62■□□□□ 0.25
CSRP1-203ENST00000458271 GNPATO15228 680 aa16.62■□□□□ 0.25
CSRP1-203ENST00000458271 FLAD1Q8NFF5 587 aa16.62■□□□□ 0.25
CSRP1-203ENST00000458271 UBR2Q8IWV8 1755 aa16.62■□□□□ 0.25
CSRP1-203ENST00000458271 KCPQ6ZWJ8 1503 aa16.61■□□□□ 0.25
CSRP1-203ENST00000458271 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.61■□□□□ 0.25
CSRP1-203ENST00000458271 FCHSD2O94868 740 aa16.61■□□□□ 0.25
CSRP1-203ENST00000458271 ARXQ96QS3 562 aa16.61■□□□□ 0.25
CSRP1-203ENST00000458271 SSFA2P28290 1259 aa16.6■□□□□ 0.25
CSRP1-203ENST00000458271 POLD1P28340 1107 aa16.6■□□□□ 0.25
CSRP1-203ENST00000458271 SLC39A6Q13433 755 aa16.6■□□□□ 0.25
CSRP1-203ENST00000458271 MSL1Q68DK7 614 aa16.6■□□□□ 0.25
CSRP1-203ENST00000458271 FHDC1Q9C0D6 1143 aaPredicted RBP16.6■□□□□ 0.25
CSRP1-203ENST00000458271 MYH14Q7Z406 1995 aaKnown RBP16.59■□□□□ 0.25
CSRP1-203ENST00000458271 IL17REQ8NFR9 667 aa16.59■□□□□ 0.25
CSRP1-203ENST00000458271 MYBBP1AQ9BQG0 1328 aaKnown RBP16.58■□□□□ 0.25
CSRP1-203ENST00000458271 CNTNAP4Q9C0A0 1308 aa16.58■□□□□ 0.25
CSRP1-203ENST00000458271 GOLGB1Q14789 3259 aaKnown RBP16.58■□□□□ 0.24
CSRP1-203ENST00000458271 C4AP0C0L4 1744 aa16.58■□□□□ 0.24
CSRP1-203ENST00000458271 CEMIPQ8WUJ3 1361 aa16.58■□□□□ 0.24
CSRP1-203ENST00000458271 TEFQ10587 303 aa16.57■□□□□ 0.24
CSRP1-203ENST00000458271 UTRNP46939 3433 aa16.57■□□□□ 0.24
CSRP1-203ENST00000458271 DLG5Q8TDM6 1919 aa16.56■□□□□ 0.24
CSRP1-203ENST00000458271 RC3H1Q5TC82 1133 aaKnown RBP16.56■□□□□ 0.24
CSRP1-203ENST00000458271 SYT17Q9BSW7 474 aa16.56■□□□□ 0.24
CSRP1-203ENST00000458271 RTCBQ9Y3I0 505 aaKnown RBP16.56■□□□□ 0.24
CSRP1-203ENST00000458271 CRKLP46109 303 aaKnown RBP16.55■□□□□ 0.24
CSRP1-203ENST00000458271 MCM10Q7L590 875 aa16.54■□□□□ 0.24
CSRP1-203ENST00000458271 DNAJC10Q8IXB1 793 aa16.54■□□□□ 0.24
CSRP1-203ENST00000458271 TTC5Q8N0Z6 440 aa16.54■□□□□ 0.24
CSRP1-203ENST00000458271 KLHL34Q8N239 644 aa16.54■□□□□ 0.24
CSRP1-203ENST00000458271 NEFMP07197 916 aa16.53■□□□□ 0.24
CSRP1-203ENST00000458271 TRAPPC3LQ5T215 181 aa16.53■□□□□ 0.24
CSRP1-203ENST00000458271 RTF1Q92541 710 aaKnown RBP16.53■□□□□ 0.24
CSRP1-203ENST00000458271 PLEKHF1Q96S99 279 aa16.53■□□□□ 0.24
CSRP1-203ENST00000458271 RPS6KA4O75676 772 aa16.52■□□□□ 0.24
CSRP1-203ENST00000458271 ZNF790Q6PG37 636 aa16.52■□□□□ 0.24
CSRP1-203ENST00000458271 PRKRIP1Q9H875 184 aaPredicted RBP16.52■□□□□ 0.24
CSRP1-203ENST00000458271 DCTN1Q14203 1278 aa16.51■□□□□ 0.23
CSRP1-203ENST00000458271 VSIG10Q8N0Z9 540 aa16.51■□□□□ 0.23
CSRP1-203ENST00000458271 ARHGEF1Q92888 912 aaKnown RBP16.51■□□□□ 0.23
CSRP1-203ENST00000458271 ZNF496Q96IT1 587 aaPredicted RBP16.51■□□□□ 0.23
CSRP1-203ENST00000458271 MAPK8IP3Q9UPT6 1336 aa16.51■□□□□ 0.23
CSRP1-203ENST00000458271 BTBD11A6QL63 1104 aa16.5■□□□□ 0.23
CSRP1-203ENST00000458271 CYP19A1P11511 503 aaPredicted RBP16.5■□□□□ 0.23
CSRP1-203ENST00000458271 INTS5Q6P9B9 1019 aaKnown RBP16.5■□□□□ 0.23
CSRP1-203ENST00000458271 CCDC87Q9NVE4 849 aa16.5■□□□□ 0.23
CSRP1-203ENST00000458271 HTATSF1O43719 755 aaKnown RBP16.49■□□□□ 0.23
CSRP1-203ENST00000458271 RFC4P35249 363 aa16.49■□□□□ 0.23
CSRP1-203ENST00000458271 MAPK8IP2Q13387 824 aaPredicted RBP16.49■□□□□ 0.23
CSRP1-203ENST00000458271 PNNQ9H307 717 aaKnown RBP16.49■□□□□ 0.23
CSRP1-203ENST00000458271 HEG1Q9ULI3 1381 aa16.49■□□□□ 0.23
CSRP1-203ENST00000458271 ZNF316A6NFI3 1004 aaPredicted RBP16.48■□□□□ 0.23
CSRP1-203ENST00000458271 DCAF8L1A6NGE4 600 aa16.48■□□□□ 0.23
CSRP1-203ENST00000458271 NFE2L2Q16236 605 aa16.48■□□□□ 0.23
CSRP1-203ENST00000458271 NLGN2Q8NFZ4 835 aa16.48■□□□□ 0.23
CSRP1-203ENST00000458271 KCNQ3O43525 872 aa16.47■□□□□ 0.23
CSRP1-203ENST00000458271 FMNL2Q96PY5 1086 aa16.47■□□□□ 0.23
CSRP1-203ENST00000458271 ZBTB1Q9Y2K1 713 aa16.47■□□□□ 0.23
CSRP1-203ENST00000458271 SOS1Q07889 1333 aaPredicted RBP16.47■□□□□ 0.23
CSRP1-203ENST00000458271 KDM3BQ7LBC6 1761 aa16.46■□□□□ 0.23
CSRP1-203ENST00000458271 MMP10P09238 476 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms