RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 LMOD3Q0VAK6 560 aa11.37□□□□□ -0.59
CLTCL1-204ENST00000458188 TEFQ10587 303 aa11.37□□□□□ -0.59
CLTCL1-204ENST00000458188 SLC52A2Q9HAB3 445 aa11.37□□□□□ -0.59
CLTCL1-204ENST00000458188 SPINK5Q9NQ38 1064 aaPredicted RBP11.37□□□□□ -0.59
CLTCL1-204ENST00000458188 TMOD3Q9NYL9 352 aa11.37□□□□□ -0.59
CLTCL1-204ENST00000458188 PARP4Q9UKK3 1724 aaKnown RBP11.36□□□□□ -0.59
CLTCL1-204ENST00000458188 BTBD11A6QL63 1104 aa11.36□□□□□ -0.59
CLTCL1-204ENST00000458188 ERVV-2B6SEH9 535 aa11.36□□□□□ -0.59
CLTCL1-204ENST00000458188 ZNF784Q8NCA9 323 aaPredicted RBP11.36□□□□□ -0.59
CLTCL1-204ENST00000458188 CDCA7LQ96GN5 454 aa11.36□□□□□ -0.59
CLTCL1-204ENST00000458188 ASAP1Q9ULH1 1129 aa11.36□□□□□ -0.59
CLTCL1-204ENST00000458188 KCNQ4P56696 695 aa11.35□□□□□ -0.59
CLTCL1-204ENST00000458188 TAF7Q15545 349 aaPredicted RBP11.35□□□□□ -0.59
CLTCL1-204ENST00000458188 ATG3Q9NT62 314 aa11.35□□□□□ -0.59
CLTCL1-204ENST00000458188 CEMIPQ8WUJ3 1361 aa11.34□□□□□ -0.59
CLTCL1-204ENST00000458188 PLEKHG2Q9H7P9 1386 aa11.34□□□□□ -0.59
CLTCL1-204ENST00000458188 PTCD1O75127 700 aaKnown RBP11.34□□□□□ -0.59
CLTCL1-204ENST00000458188 C1QTNF8P60827 252 aa11.34□□□□□ -0.59
CLTCL1-204ENST00000458188 CCDC27Q2M243 656 aa11.34□□□□□ -0.59
CLTCL1-204ENST00000458188 TSR2Q969E8 191 aaKnown RBP11.34□□□□□ -0.59
CLTCL1-204ENST00000458188 BCL11BQ9C0K0 894 aaPredicted RBP11.34□□□□□ -0.59
CLTCL1-204ENST00000458188 WNK3Q9BYP7 1800 aa11.33□□□□□ -0.6
CLTCL1-204ENST00000458188 PKD1L3Q7Z443 1732 aa11.33□□□□□ -0.6
CLTCL1-204ENST00000458188 RBM42Q9BTD8 480 aaKnown RBP11.33□□□□□ -0.6
CLTCL1-204ENST00000458188 TSPYL4Q9UJ04 414 aa11.33□□□□□ -0.6
CLTCL1-204ENST00000458188 ZNF521Q96K83 1311 aa11.33□□□□□ -0.6
CLTCL1-204ENST00000458188 SHANK3Q9BYB0 1731 aa11.32□□□□□ -0.6
CLTCL1-204ENST00000458188 TNS1Q9HBL0 1735 aaKnown RBP11.32□□□□□ -0.6
CLTCL1-204ENST00000458188 KRT24Q2M2I5 525 aa11.32□□□□□ -0.6
CLTCL1-204ENST00000458188 WDR63Q8IWG1 891 aa11.32□□□□□ -0.6
CLTCL1-204ENST00000458188 MBIPQ9NS73 344 aa11.32□□□□□ -0.6
CLTCL1-204ENST00000458188 PRAMEF22A3QJZ6 481 aa11.31□□□□□ -0.6
CLTCL1-204ENST00000458188 ELL2O00472 640 aaPredicted RBP11.31□□□□□ -0.6
CLTCL1-204ENST00000458188 CHL1O00533 1208 aa11.31□□□□□ -0.6
CLTCL1-204ENST00000458188 GOLGA2Q08379 1002 aa11.31□□□□□ -0.6
CLTCL1-204ENST00000458188 ZNF790Q6PG37 636 aa11.31□□□□□ -0.6
CLTCL1-204ENST00000458188 TTC5Q8N0Z6 440 aa11.31□□□□□ -0.6
CLTCL1-204ENST00000458188 CFAP44Q96MT7 982 aa11.31□□□□□ -0.6
CLTCL1-204ENST00000458188 BCL9O00512 1426 aa11.31□□□□□ -0.6
CLTCL1-204ENST00000458188 ZNF853P0CG23 659 aa11.3□□□□□ -0.6
CLTCL1-204ENST00000458188 GNAI1P63096 354 aa11.3□□□□□ -0.6
CLTCL1-204ENST00000458188 CALD1Q05682 793 aaKnown RBP11.3□□□□□ -0.6
CLTCL1-204ENST00000458188 NCBP3Q53F19 620 aaKnown RBP11.3□□□□□ -0.6
CLTCL1-204ENST00000458188 ZNF496Q96IT1 587 aaPredicted RBP11.3□□□□□ -0.6
CLTCL1-204ENST00000458188 SLC4A9Q96Q91 983 aa11.3□□□□□ -0.6
CLTCL1-204ENST00000458188 IFT57Q9NWB7 429 aa11.3□□□□□ -0.6
CLTCL1-204ENST00000458188 EIF4A1P60842 406 aaKnown RBP11.29□□□□□ -0.6
CLTCL1-204ENST00000458188 SLFN5Q08AF3 891 aa11.29□□□□□ -0.6
CLTCL1-204ENST00000458188 PROM2Q8N271 834 aa11.29□□□□□ -0.6
CLTCL1-204ENST00000458188 NGEFQ8N5V2 710 aa11.29□□□□□ -0.6
CLTCL1-204ENST00000458188 PALLDQ8WX93 1383 aa11.28□□□□□ -0.6
CLTCL1-204ENST00000458188 ATP6V1AP38606 617 aa11.28□□□□□ -0.6
CLTCL1-204ENST00000458188 EXOSC9Q06265 439 aaKnown RBP11.28□□□□□ -0.6
CLTCL1-204ENST00000458188 TSPYL6Q8N831 410 aa11.28□□□□□ -0.6
CLTCL1-204ENST00000458188 C8orf58Q8NAV2 365 aa11.28□□□□□ -0.6
CLTCL1-204ENST00000458188 NECTIN2Q92692 538 aa11.28□□□□□ -0.6
CLTCL1-204ENST00000458188 TOGARAM1Q9Y4F4 1720 aa11.28□□□□□ -0.6
CLTCL1-204ENST00000458188 ZBED9Q6R2W3 1325 aa11.28□□□□□ -0.6
CLTCL1-204ENST00000458188 FANCIQ9NVI1 1328 aa11.28□□□□□ -0.6
CLTCL1-204ENST00000458188 CHD4Q14839 1912 aa11.27□□□□□ -0.6
CLTCL1-204ENST00000458188 LOC102724428A0A0B4J2F2 783 aa11.27□□□□□ -0.61
CLTCL1-204ENST00000458188 TCERG1O14776 1098 aaKnown RBP11.27□□□□□ -0.61
CLTCL1-204ENST00000458188 SIK1P57059 783 aa11.27□□□□□ -0.61
CLTCL1-204ENST00000458188 ITPK1Q13572 414 aa11.27□□□□□ -0.61
CLTCL1-204ENST00000458188 TXNRD1Q16881 649 aa11.27□□□□□ -0.61
CLTCL1-204ENST00000458188 DNAJC10Q8IXB1 793 aa11.27□□□□□ -0.61
CLTCL1-204ENST00000458188 SMARCC1Q92922 1105 aaPredicted RBP11.27□□□□□ -0.61
CLTCL1-204ENST00000458188 FMNL2Q96PY5 1086 aa11.27□□□□□ -0.61
CLTCL1-204ENST00000458188 LRRC4BQ9NT99 713 aa11.27□□□□□ -0.61
CLTCL1-204ENST00000458188 CCNL1Q9UK58 526 aaPredicted RBP11.27□□□□□ -0.61
CLTCL1-204ENST00000458188 IL16Q14005 1332 aa11.27□□□□□ -0.61
CLTCL1-204ENST00000458188 E9PSI1 815 aa11.26□□□□□ -0.61
CLTCL1-204ENST00000458188 EIF2S2P20042 333 aaKnown RBP11.26□□□□□ -0.61
CLTCL1-204ENST00000458188 PIP4K2AP48426 406 aaPredicted RBP11.26□□□□□ -0.61
CLTCL1-204ENST00000458188 SMIM5Q71RC9 77 aa11.26□□□□□ -0.61
CLTCL1-204ENST00000458188 MYH16Q9H6N6 1097 aa11.26□□□□□ -0.61
CLTCL1-204ENST00000458188 USP16Q9Y5T5 823 aa11.26□□□□□ -0.61
CLTCL1-204ENST00000458188 DOT1LQ8TEK3 1739 aa11.26□□□□□ -0.61
CLTCL1-204ENST00000458188 MRC1P22897 1456 aa11.25□□□□□ -0.61
CLTCL1-204ENST00000458188 RREB1Q92766 1687 aa11.25□□□□□ -0.61
CLTCL1-204ENST00000458188 PLSCR1O15162 318 aa11.25□□□□□ -0.61
CLTCL1-204ENST00000458188 DUSP27Q5VZP5 1158 aa11.25□□□□□ -0.61
CLTCL1-204ENST00000458188 BABAM1Q9NWV8 329 aa11.25□□□□□ -0.61
CLTCL1-204ENST00000458188 NUP188Q5SRE5 1749 aa11.25□□□□□ -0.61
CLTCL1-204ENST00000458188 GIGYF1O75420 1035 aaPredicted RBP11.24□□□□□ -0.61
CLTCL1-204ENST00000458188 TRMT2AQ8IZ69 625 aaKnown RBP11.24□□□□□ -0.61
CLTCL1-204ENST00000458188 LINC00116Q8NCU8 138 aa11.24□□□□□ -0.61
CLTCL1-204ENST00000458188 DLG5Q8TDM6 1919 aa11.24□□□□□ -0.61
CLTCL1-204ENST00000458188 ADAMTS7Q9UKP4 1686 aa11.24□□□□□ -0.61
CLTCL1-204ENST00000458188 A1BGP04217 495 aa11.23□□□□□ -0.61
CLTCL1-204ENST00000458188 SNRPA1P09661 255 aaKnown RBP11.23□□□□□ -0.61
CLTCL1-204ENST00000458188 TWISTNBQ3B726 338 aaPredicted RBP11.23□□□□□ -0.61
CLTCL1-204ENST00000458188 HEG1Q9ULI3 1381 aa11.23□□□□□ -0.61
CLTCL1-204ENST00000458188 SCN11AQ9UI33 1791 aa11.23□□□□□ -0.61
CLTCL1-204ENST00000458188 VAMP4O75379 141 aa11.22□□□□□ -0.61
CLTCL1-204ENST00000458188 ANXA1P04083 346 aa11.22□□□□□ -0.61
CLTCL1-204ENST00000458188 CANXP27824 592 aaKnown RBP11.22□□□□□ -0.61
CLTCL1-204ENST00000458188 NHSQ6T4R5 1651 aa11.22□□□□□ -0.61
CLTCL1-204ENST00000458188 KCPQ6ZWJ8 1503 aa11.21□□□□□ -0.61
CLTCL1-204ENST00000458188 CYP19A1P11511 503 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms