RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 FCHSD2O94868 740 aa14.64□□□□□ -0.07
SYNE2-207ENST00000458046 PHACTR3Q96KR7 559 aa14.64□□□□□ -0.07
SYNE2-207ENST00000458046 POLKQ9UBT6 870 aa14.64□□□□□ -0.07
SYNE2-207ENST00000458046 ELL2O00472 640 aaPredicted RBP14.64□□□□□ -0.07
SYNE2-207ENST00000458046 GORABQ5T7V8 394 aa14.64□□□□□ -0.07
SYNE2-207ENST00000458046 SMC5Q8IY18 1101 aa14.64□□□□□ -0.07
SYNE2-207ENST00000458046 LNPKQ9C0E8 428 aa14.64□□□□□ -0.07
SYNE2-207ENST00000458046 PEX14O75381 377 aa14.63□□□□□ -0.07
SYNE2-207ENST00000458046 PNPLA6Q8IY17 1366 aa14.63□□□□□ -0.07
SYNE2-207ENST00000458046 FAM193AP78312 1265 aa14.63□□□□□ -0.07
SYNE2-207ENST00000458046 MLECQ14165 292 aa14.63□□□□□ -0.07
SYNE2-207ENST00000458046 KIF16BQ96L93 1317 aa14.63□□□□□ -0.07
SYNE2-207ENST00000458046 FNBP4Q8N3X1 1017 aaPredicted RBP14.62□□□□□ -0.07
SYNE2-207ENST00000458046 MYO5BQ9ULV0 1848 aa14.62□□□□□ -0.07
SYNE2-207ENST00000458046 EMILIN1Q9Y6C2 1016 aa14.61□□□□□ -0.07
SYNE2-207ENST00000458046 POLA2Q14181 598 aa14.61□□□□□ -0.07
SYNE2-207ENST00000458046 ALDH1L2Q3SY69 923 aa14.6□□□□□ -0.07
SYNE2-207ENST00000458046 TSPYL6Q8N831 410 aa14.6□□□□□ -0.07
SYNE2-207ENST00000458046 TMEM131LA2VDJ0 1609 aa14.6□□□□□ -0.07
SYNE2-207ENST00000458046 NUCB1Q02818 461 aa14.6□□□□□ -0.07
SYNE2-207ENST00000458046 GLIPR1L2Q4G1C9 344 aa14.6□□□□□ -0.07
SYNE2-207ENST00000458046 MAP4K4O95819 1239 aaPredicted RBP14.59□□□□□ -0.07
SYNE2-207ENST00000458046 PROSER2Q86WR7 435 aaPredicted RBP14.59□□□□□ -0.07
SYNE2-207ENST00000458046 DRC1Q96MC2 740 aa14.59□□□□□ -0.07
SYNE2-207ENST00000458046 RPS6KL1Q9Y6S9 549 aa14.59□□□□□ -0.07
SYNE2-207ENST00000458046 VAMP4O75379 141 aa14.59□□□□□ -0.07
SYNE2-207ENST00000458046 NFE2L2Q16236 605 aa14.59□□□□□ -0.07
SYNE2-207ENST00000458046 CHD1LQ86WJ1 897 aa14.59□□□□□ -0.07
SYNE2-207ENST00000458046 NME9Q86XW9 330 aa14.59□□□□□ -0.07
SYNE2-207ENST00000458046 PATL2C9JE40 543 aaKnown RBP14.58□□□□□ -0.08
SYNE2-207ENST00000458046 FOXD4Q12950 439 aaPredicted RBP14.58□□□□□ -0.08
SYNE2-207ENST00000458046 ANKRD45Q5TZF3 282 aa14.58□□□□□ -0.08
SYNE2-207ENST00000458046 AK7Q96M32 723 aa14.58□□□□□ -0.08
SYNE2-207ENST00000458046 ZBTB7BO15156 539 aaPredicted RBP14.57□□□□□ -0.08
SYNE2-207ENST00000458046 MRRFQ96E11 262 aaKnown RBP14.57□□□□□ -0.08
SYNE2-207ENST00000458046 ESF1Q9H501 851 aaKnown RBP14.57□□□□□ -0.08
SYNE2-207ENST00000458046 PPFIA4O75335 1185 aa14.57□□□□□ -0.08
SYNE2-207ENST00000458046 RBM26Q5T8P6 1007 aaKnown RBP14.57□□□□□ -0.08
SYNE2-207ENST00000458046 MRPL50Q8N5N7 158 aaKnown RBP14.57□□□□□ -0.08
SYNE2-207ENST00000458046 PPP1R1BQ9UD71 204 aaPredicted RBP14.57□□□□□ -0.08
SYNE2-207ENST00000458046 MCM4P33991 863 aa14.56□□□□□ -0.08
SYNE2-207ENST00000458046 PDE4DQ08499 809 aa14.56□□□□□ -0.08
SYNE2-207ENST00000458046 RRS1Q15050 365 aaKnown RBP14.56□□□□□ -0.08
SYNE2-207ENST00000458046 VTI1AQ96AJ9 217 aa14.56□□□□□ -0.08
SYNE2-207ENST00000458046 MBIPQ9NS73 344 aa14.56□□□□□ -0.08
SYNE2-207ENST00000458046 KLHL42Q9P2K6 505 aa14.56□□□□□ -0.08
SYNE2-207ENST00000458046 PHLPP1O60346 1717 aa14.55□□□□□ -0.08
SYNE2-207ENST00000458046 IL13P35225 146 aa14.55□□□□□ -0.08
SYNE2-207ENST00000458046 HSCBQ8IWL3 235 aa14.55□□□□□ -0.08
SYNE2-207ENST00000458046 RGS12O14924 1447 aa14.55□□□□□ -0.08
SYNE2-207ENST00000458046 FAM83GA6ND36 823 aa14.55□□□□□ -0.08
SYNE2-207ENST00000458046 MCM6Q14566 821 aa14.55□□□□□ -0.08
SYNE2-207ENST00000458046 TXNDC2Q86VQ3 553 aa14.55□□□□□ -0.08
SYNE2-207ENST00000458046 CHMP5Q9NZZ3 219 aa14.55□□□□□ -0.08
SYNE2-207ENST00000458046 DCTN1Q14203 1278 aa14.54□□□□□ -0.08
SYNE2-207ENST00000458046 ROBO1Q9Y6N7 1651 aa14.54□□□□□ -0.08
SYNE2-207ENST00000458046 GNAI1P63096 354 aa14.54□□□□□ -0.08
SYNE2-207ENST00000458046 C8orf58Q8NAV2 365 aa14.54□□□□□ -0.08
SYNE2-207ENST00000458046 PLSCR2Q9NRY7 297 aa14.54□□□□□ -0.08
SYNE2-207ENST00000458046 STRCP1A6NGW2 1772 aa14.54□□□□□ -0.08
SYNE2-207ENST00000458046 C1QTNF8P60827 252 aa14.53□□□□□ -0.08
SYNE2-207ENST00000458046 SREK1Q8WXA9 508 aaKnown RBP14.53□□□□□ -0.08
SYNE2-207ENST00000458046 WASLO00401 505 aaPredicted RBP14.53□□□□□ -0.08
SYNE2-207ENST00000458046 TWISTNBQ3B726 338 aaPredicted RBP14.53□□□□□ -0.08
SYNE2-207ENST00000458046 GPATCH3Q96I76 525 aa14.53□□□□□ -0.08
SYNE2-207ENST00000458046 CIZ1Q9ULV3 898 aaPredicted RBP14.53□□□□□ -0.08
SYNE2-207ENST00000458046 PPIP5K1Q6PFW1 1433 aa14.53□□□□□ -0.08
SYNE2-207ENST00000458046 CALD1Q05682 793 aaKnown RBP14.52□□□□□ -0.08
SYNE2-207ENST00000458046 SIRT2Q8IXJ6 389 aa14.52□□□□□ -0.08
SYNE2-207ENST00000458046 IFT57Q9NWB7 429 aa14.52□□□□□ -0.08
SYNE2-207ENST00000458046 IVNS1ABPQ9Y6Y0 642 aa14.52□□□□□ -0.08
SYNE2-207ENST00000458046 ANKRD26Q9UPS8 1709 aa14.52□□□□□ -0.08
SYNE2-207ENST00000458046 CLTCQ00610 1675 aaKnown RBP14.52□□□□□ -0.09
SYNE2-207ENST00000458046 XIRP1Q702N8 1843 aaKnown RBP14.52□□□□□ -0.09
SYNE2-207ENST00000458046 NUDT16Q96DE0 195 aaKnown RBP14.51□□□□□ -0.09
SYNE2-207ENST00000458046 ZNF853P0CG23 659 aa14.51□□□□□ -0.09
SYNE2-207ENST00000458046 ARHGAP45Q92619 1136 aa14.51□□□□□ -0.09
SYNE2-207ENST00000458046 COG3Q96JB2 828 aa14.51□□□□□ -0.09
SYNE2-207ENST00000458046 BMP2KLQ5H9B9 411 aa14.5□□□□□ -0.09
SYNE2-207ENST00000458046 GCC1Q96CN9 775 aa14.5□□□□□ -0.09
SYNE2-207ENST00000458046 RIMS2Q9UQ26 1411 aa14.5□□□□□ -0.09
SYNE2-207ENST00000458046 RBM47A0AV96 593 aaKnown RBP14.5□□□□□ -0.09
SYNE2-207ENST00000458046 CDCA7Q9BWT1 371 aaPredicted RBP14.5□□□□□ -0.09
SYNE2-207ENST00000458046 TRIM66O15016 1216 aa14.49□□□□□ -0.09
SYNE2-207ENST00000458046 SKIV2LQ15477 1246 aaKnown RBP14.49□□□□□ -0.09
SYNE2-207ENST00000458046 L1TD1Q5T7N2 865 aaKnown RBP14.49□□□□□ -0.09
SYNE2-207ENST00000458046 SND1Q7KZF4 910 aaKnown RBP eCLIP14.49□□□□□ -0.09
SYNE2-207ENST00000458046 ATP7BP35670 1465 aa14.49□□□□□ -0.09
SYNE2-207ENST00000458046 MKRN4PQ13434 485 aaPredicted RBP14.49□□□□□ -0.09
SYNE2-207ENST00000458046 COL16A1Q07092 1604 aaPredicted RBP14.48□□□□□ -0.09
SYNE2-207ENST00000458046 METP08581 1390 aa14.48□□□□□ -0.09
SYNE2-207ENST00000458046 NPHP4O75161 1426 aaPredicted RBP14.48□□□□□ -0.09
SYNE2-207ENST00000458046 KIF20BQ96Q89 1820 aa14.48□□□□□ -0.09
SYNE2-207ENST00000458046 HSP90AB1P08238 724 aaKnown RBP14.48□□□□□ -0.09
SYNE2-207ENST00000458046 TBC1D9Q6ZT07 1266 aa14.48□□□□□ -0.09
SYNE2-207ENST00000458046 GOLGA6L3A6NEY3 463 aa14.48□□□□□ -0.09
SYNE2-207ENST00000458046 RBM6P78332 1123 aaKnown RBP14.47□□□□□ -0.09
SYNE2-207ENST00000458046 KRT24Q2M2I5 525 aa14.47□□□□□ -0.09
SYNE2-207ENST00000458046 RBM42Q9BTD8 480 aaKnown RBP14.47□□□□□ -0.09
SYNE2-207ENST00000458046 CCDC61Q9Y6R9 512 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms