RNA–Protein interactions for RNA: ENST00000458034.1

RFX3-211, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-211ENST00000458034 CHD2O14647 1828 aaKnown RBP13.51□□□□□ -0.25
RFX3-211ENST00000458034 MAP3K5Q99683 1374 aa13.51□□□□□ -0.25
RFX3-211ENST00000458034 GNAT3A8MTJ3 354 aa13.51□□□□□ -0.25
RFX3-211ENST00000458034 DDIT3P35638 169 aa13.51□□□□□ -0.25
RFX3-211ENST00000458034 KRT24Q2M2I5 525 aa13.51□□□□□ -0.25
RFX3-211ENST00000458034 EYA1Q99502 592 aa13.51□□□□□ -0.25
RFX3-211ENST00000458034 ISY1Q9ULR0 285 aaKnown RBP13.51□□□□□ -0.25
RFX3-211ENST00000458034 TRAK2O60296 914 aa13.5□□□□□ -0.25
RFX3-211ENST00000458034 GNAI2P04899 355 aa13.5□□□□□ -0.25
RFX3-211ENST00000458034 GNAI3P08754 354 aa13.5□□□□□ -0.25
RFX3-211ENST00000458034 GSPT1P15170 499 aaKnown RBP13.5□□□□□ -0.25
RFX3-211ENST00000458034 NLRP6P59044 892 aa13.5□□□□□ -0.25
RFX3-211ENST00000458034 SKOR2Q2VWA4 1001 aaPredicted RBP13.5□□□□□ -0.25
RFX3-211ENST00000458034 MEIS3Q99687 375 aa13.5□□□□□ -0.25
RFX3-211ENST00000458034 BRPF3Q9ULD4 1205 aa13.5□□□□□ -0.25
RFX3-211ENST00000458034 GOLGA6L3A6NEY3 463 aa13.49□□□□□ -0.25
RFX3-211ENST00000458034 REC8O95072 547 aa13.49□□□□□ -0.25
RFX3-211ENST00000458034 HOXC9P31274 260 aa13.49□□□□□ -0.25
RFX3-211ENST00000458034 KIF2CQ99661 725 aa13.49□□□□□ -0.25
RFX3-211ENST00000458034 ZNF142P52746 1687 aaPredicted RBP13.49□□□□□ -0.25
RFX3-211ENST00000458034 NWD1Q149M9 1564 aa13.49□□□□□ -0.25
RFX3-211ENST00000458034 RAB3GAP1Q15042 981 aa13.48□□□□□ -0.25
RFX3-211ENST00000458034 TUBGCP6Q96RT7 1819 aa13.48□□□□□ -0.25
RFX3-211ENST00000458034 PHRF1Q9P1Y6 1649 aaKnown RBP13.47□□□□□ -0.25
RFX3-211ENST00000458034 GOLGA6L22H0YM25 854 aa13.47□□□□□ -0.25
RFX3-211ENST00000458034 FOXO3O43524 673 aa13.47□□□□□ -0.25
RFX3-211ENST00000458034 SLC4A10Q6U841 1118 aa13.47□□□□□ -0.25
RFX3-211ENST00000458034 OSBPL3Q9H4L5 887 aa13.47□□□□□ -0.25
RFX3-211ENST00000458034 TAF7Q15545 349 aaPredicted RBP13.46□□□□□ -0.25
RFX3-211ENST00000458034 FAM43AQ8N2R8 423 aa13.46□□□□□ -0.25
RFX3-211ENST00000458034 KDM3BQ7LBC6 1761 aa13.45□□□□□ -0.26
RFX3-211ENST00000458034 LMO7Q8WWI1 1683 aa13.45□□□□□ -0.26
RFX3-211ENST00000458034 C19orf67A6NJJ6 358 aa13.45□□□□□ -0.26
RFX3-211ENST00000458034 ST18O60284 1047 aa13.45□□□□□ -0.26
RFX3-211ENST00000458034 SDSP20132 328 aa13.45□□□□□ -0.26
RFX3-211ENST00000458034 FLIIQ13045 1269 aa13.45□□□□□ -0.26
RFX3-211ENST00000458034 ABTB2Q8N961 1025 aa13.45□□□□□ -0.26
RFX3-211ENST00000458034 TNPO1Q92973 898 aaKnown RBP13.45□□□□□ -0.26
RFX3-211ENST00000458034 USP26Q9BXU7 913 aa13.45□□□□□ -0.26
RFX3-211ENST00000458034 MIS18AQ9NYP9 233 aa13.45□□□□□ -0.26
RFX3-211ENST00000458034 ADGRL3Q9HAR2 1447 aa13.45□□□□□ -0.26
RFX3-211ENST00000458034 FSD2A1L4K1 749 aa13.44□□□□□ -0.26
RFX3-211ENST00000458034 ERC2O15083 957 aa13.44□□□□□ -0.26
RFX3-211ENST00000458034 KCNA6P17658 529 aa13.44□□□□□ -0.26
RFX3-211ENST00000458034 NUCB2P80303 420 aa13.44□□□□□ -0.26
RFX3-211ENST00000458034 FKBP5Q13451 457 aaPredicted RBP13.44□□□□□ -0.26
RFX3-211ENST00000458034 G2E3Q7L622 706 aa13.44□□□□□ -0.26
RFX3-211ENST00000458034 SRCIN1Q9C0H9 1055 aa13.44□□□□□ -0.26
RFX3-211ENST00000458034 PHF8Q9UPP1 1060 aa13.44□□□□□ -0.26
RFX3-211ENST00000458034 CLEC11AQ9Y240 323 aa13.44□□□□□ -0.26
RFX3-211ENST00000458034 AOX1Q06278 1338 aa13.43□□□□□ -0.26
RFX3-211ENST00000458034 AK9Q5TCS8 1911 aa13.43□□□□□ -0.26
RFX3-211ENST00000458034 ZBTB22O15209 634 aa13.43□□□□□ -0.26
RFX3-211ENST00000458034 SMARCA5O60264 1052 aaPredicted RBP13.43□□□□□ -0.26
RFX3-211ENST00000458034 HOXB7P09629 217 aa13.43□□□□□ -0.26
RFX3-211ENST00000458034 MCCP23508 829 aa13.43□□□□□ -0.26
RFX3-211ENST00000458034 MRE11P49959 708 aa13.43□□□□□ -0.26
RFX3-211ENST00000458034 ATP8B2P98198 1209 aa13.43□□□□□ -0.26
RFX3-211ENST00000458034 MED1Q15648 1581 aaPredicted RBP13.43□□□□□ -0.26
RFX3-211ENST00000458034 C16orf71Q8IYS4 520 aaPredicted RBP13.43□□□□□ -0.26
RFX3-211ENST00000458034 KCNH5Q8NCM2 988 aa13.43□□□□□ -0.26
RFX3-211ENST00000458034 LRRCC1Q9C099 1032 aa13.43□□□□□ -0.26
RFX3-211ENST00000458034 CWC22Q9HCG8 908 aaKnown RBP13.43□□□□□ -0.26
RFX3-211ENST00000458034 NFAT5O94916 1531 aa13.43□□□□□ -0.26
RFX3-211ENST00000458034 F6X3S4 739 aa13.42□□□□□ -0.26
RFX3-211ENST00000458034 PDE1AP54750 535 aa13.42□□□□□ -0.26
RFX3-211ENST00000458034 SPDYE1Q8NFV5 336 aaPredicted RBP13.42□□□□□ -0.26
RFX3-211ENST00000458034 IP6K1Q92551 441 aa13.42□□□□□ -0.26
RFX3-211ENST00000458034 APBB1O00213 710 aa13.41□□□□□ -0.26
RFX3-211ENST00000458034 MCM2P49736 904 aa13.41□□□□□ -0.26
RFX3-211ENST00000458034 CLEC17AQ6ZS10 378 aa13.41□□□□□ -0.26
RFX3-211ENST00000458034 C14orf37Q86TY3 774 aa13.41□□□□□ -0.26
RFX3-211ENST00000458034 ANKLE2Q86XL3 938 aa13.41□□□□□ -0.26
RFX3-211ENST00000458034 RTN4Q9NQC3 1192 aaKnown RBP13.41□□□□□ -0.26
RFX3-211ENST00000458034 IBTKQ9P2D0 1353 aaPredicted RBP13.41□□□□□ -0.26
RFX3-211ENST00000458034 NCAPD2Q15021 1401 aa13.4□□□□□ -0.26
RFX3-211ENST00000458034 RAB11FIP3O75154 756 aa13.4□□□□□ -0.26
RFX3-211ENST00000458034 HDGFL1Q5TGJ6 251 aa13.4□□□□□ -0.26
RFX3-211ENST00000458034 IL17REQ8NFR9 667 aa13.4□□□□□ -0.26
RFX3-211ENST00000458034 OTUD7AQ8TE49 926 aaPredicted RBP13.4□□□□□ -0.26
RFX3-211ENST00000458034 OVOS2A0A0G2JMS6 1433 aa13.39□□□□□ -0.27
RFX3-211ENST00000458034 EPB41L2O43491 1005 aaKnown RBP13.39□□□□□ -0.27
RFX3-211ENST00000458034 GABBR2O75899 941 aa13.39□□□□□ -0.27
RFX3-211ENST00000458034 CD2BP2O95400 341 aaKnown RBP13.39□□□□□ -0.27
RFX3-211ENST00000458034 UBTFL1P0CB47 393 aaPredicted RBP13.39□□□□□ -0.27
RFX3-211ENST00000458034 ATXN8OSP0DMR3 200 aa13.39□□□□□ -0.27
RFX3-211ENST00000458034 LTV1Q96GA3 475 aaPredicted RBP13.39□□□□□ -0.27
RFX3-211ENST00000458034 GZF1Q9H116 711 aaPredicted RBP13.39□□□□□ -0.27
RFX3-211ENST00000458034 CEMIPQ8WUJ3 1361 aa13.39□□□□□ -0.27
RFX3-211ENST00000458034 MX1P20591 662 aa13.38□□□□□ -0.27
RFX3-211ENST00000458034 NUTM2GQ5VZR2 741 aa13.38□□□□□ -0.27
RFX3-211ENST00000458034 STAP2Q9UGK3 403 aa13.38□□□□□ -0.27
RFX3-211ENST00000458034 SETD1BQ9UPS6 1966 aaKnown RBP13.38□□□□□ -0.27
RFX3-211ENST00000458034 SALL3Q9BXA9 1300 aa13.38□□□□□ -0.27
RFX3-211ENST00000458034 RGPD2P0DJD1 1756 aa13.37□□□□□ -0.27
RFX3-211ENST00000458034 KIF1AQ12756 1690 aa13.37□□□□□ -0.27
RFX3-211ENST00000458034 ANAPC15P60006 121 aa13.37□□□□□ -0.27
RFX3-211ENST00000458034 PLEKHO1Q53GL0 409 aaPredicted RBP13.37□□□□□ -0.27
RFX3-211ENST00000458034 LHX8Q68G74 356 aa13.37□□□□□ -0.27
RFX3-211ENST00000458034 HDAC5Q9UQL6 1122 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms