RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 POLR3GO15318 223 aaPredicted RBP22.99■■□□□ 1.27
SNX27-204ENST00000458013 TTC16Q8NEE8 873 aa22.99■■□□□ 1.27
SNX27-204ENST00000458013 IGF1RP08069 1367 aa22.98■■□□□ 1.27
SNX27-204ENST00000458013 POLR3DP05423 398 aaPredicted RBP22.98■■□□□ 1.27
SNX27-204ENST00000458013 BMP2KQ9NSY1 1161 aaPredicted RBP22.98■■□□□ 1.27
SNX27-204ENST00000458013 IGHMBP2P38935 993 aaKnown RBP22.98■■□□□ 1.27
SNX27-204ENST00000458013 TSHZ3Q63HK5 1081 aa22.98■■□□□ 1.27
SNX27-204ENST00000458013 PDCL2Q8N4E4 241 aa22.98■■□□□ 1.27
SNX27-204ENST00000458013 SF3B2Q13435 895 aaKnown RBP22.98■■□□□ 1.27
SNX27-204ENST00000458013 SSFA2P28290 1259 aa22.97■■□□□ 1.27
SNX27-204ENST00000458013 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.97■■□□□ 1.27
SNX27-204ENST00000458013 CCDC148Q8NFR7 591 aa22.97■■□□□ 1.27
SNX27-204ENST00000458013 SMTNL1A8MU46 457 aa22.97■■□□□ 1.27
SNX27-204ENST00000458013 CTNNBL1Q8WYA6 563 aaPredicted RBP22.97■■□□□ 1.27
SNX27-204ENST00000458013 WDR63Q8IWG1 891 aa22.97■■□□□ 1.27
SNX27-204ENST00000458013 GOLGA6L10A0A0M3HER8 536 aa22.96■■□□□ 1.27
SNX27-204ENST00000458013 JARID2Q92833 1246 aaPredicted RBP22.96■■□□□ 1.27
SNX27-204ENST00000458013 SCLT1Q96NL6 688 aa22.96■■□□□ 1.27
SNX27-204ENST00000458013 NSD3Q9BZ95 1437 aa22.96■■□□□ 1.27
SNX27-204ENST00000458013 BIN1O00499 593 aa22.96■■□□□ 1.27
SNX27-204ENST00000458013 JAKMIP3Q5VZ66 844 aa22.96■■□□□ 1.27
SNX27-204ENST00000458013 PNISRQ8TF01 805 aaKnown RBP22.96■■□□□ 1.27
SNX27-204ENST00000458013 GNAT3A8MTJ3 354 aa22.95■■□□□ 1.27
SNX27-204ENST00000458013 DUSP27Q5VZP5 1158 aa22.95■■□□□ 1.27
SNX27-204ENST00000458013 RBM27Q9P2N5 1060 aaKnown RBP22.95■■□□□ 1.27
SNX27-204ENST00000458013 DYDC1Q8WWB3 177 aa22.95■■□□□ 1.26
SNX27-204ENST00000458013 PPP6R1Q9UPN7 881 aa22.95■■□□□ 1.26
SNX27-204ENST00000458013 ZSCAN31Q96LW9 406 aaPredicted RBP22.95■■□□□ 1.26
SNX27-204ENST00000458013 TICAM2Q86XR7 235 aa22.95■■□□□ 1.26
SNX27-204ENST00000458013 URI1O94763 535 aaPredicted RBP22.94■■□□□ 1.26
SNX27-204ENST00000458013 ESPNB1AK53 854 aa22.94■■□□□ 1.26
SNX27-204ENST00000458013 PPM1FP49593 454 aaPredicted RBP22.94■■□□□ 1.26
SNX27-204ENST00000458013 PSMD1Q99460 953 aa22.94■■□□□ 1.26
SNX27-204ENST00000458013 GOLGA6L7A0A1B0GV03 622 aa22.94■■□□□ 1.26
SNX27-204ENST00000458013 RANBP6O60518 1105 aaKnown RBP22.94■■□□□ 1.26
SNX27-204ENST00000458013 MX1P20591 662 aa22.94■■□□□ 1.26
SNX27-204ENST00000458013 PANK2Q9BZ23 570 aa22.94■■□□□ 1.26
SNX27-204ENST00000458013 WAPLQ7Z5K2 1190 aa22.94■■□□□ 1.26
SNX27-204ENST00000458013 ZNF397Q8NF99 534 aaPredicted RBP22.94■■□□□ 1.26
SNX27-204ENST00000458013 ANKIB1Q9P2G1 1089 aa22.94■■□□□ 1.26
SNX27-204ENST00000458013 SEC63Q9UGP8 760 aaKnown RBP22.94■■□□□ 1.26
SNX27-204ENST00000458013 MACROD2A1Z1Q3 448 aa22.93■■□□□ 1.26
SNX27-204ENST00000458013 SRRTQ9BXP5 876 aaKnown RBP22.93■■□□□ 1.26
SNX27-204ENST00000458013 UBE4AQ14139 1066 aa22.93■■□□□ 1.26
SNX27-204ENST00000458013 PRDM11Q9NQV5 511 aa22.93■■□□□ 1.26
SNX27-204ENST00000458013 CLIP2Q9UDT6 1046 aa22.93■■□□□ 1.26
SNX27-204ENST00000458013 CTNNA3Q9UI47 895 aa22.93■■□□□ 1.26
SNX27-204ENST00000458013 MAP2K1Q02750 393 aaPredicted RBP22.93■■□□□ 1.26
SNX27-204ENST00000458013 SPTY2D1Q68D10 685 aaPredicted RBP22.93■■□□□ 1.26
SNX27-204ENST00000458013 TMPOP42166 694 aaKnown RBP22.92■■□□□ 1.26
SNX27-204ENST00000458013 MKNK2Q9HBH9 465 aa22.92■■□□□ 1.26
SNX27-204ENST00000458013 IQCEQ6IPM2 695 aa22.92■■□□□ 1.26
SNX27-204ENST00000458013 DCAF8L1A6NGE4 600 aa22.92■■□□□ 1.26
SNX27-204ENST00000458013 WDR97A6NE52 1622 aa22.92■■□□□ 1.26
SNX27-204ENST00000458013 UBXN4Q92575 508 aa22.92■■□□□ 1.26
SNX27-204ENST00000458013 CCDC96Q2M329 555 aa22.91■■□□□ 1.26
SNX27-204ENST00000458013 CRACR2BQ8N4Y2 399 aaPredicted RBP22.91■■□□□ 1.26
SNX27-204ENST00000458013 TMCO3Q6UWJ1 677 aa22.91■■□□□ 1.26
SNX27-204ENST00000458013 NUP88Q99567 741 aaPredicted RBP22.91■■□□□ 1.26
SNX27-204ENST00000458013 MMRN2Q9H8L6 949 aa22.91■■□□□ 1.26
SNX27-204ENST00000458013 SPA17Q15506 151 aa22.91■■□□□ 1.26
SNX27-204ENST00000458013 PTPN14Q15678 1187 aa22.91■■□□□ 1.26
SNX27-204ENST00000458013 SPDYE4A6NLX3 237 aa22.9■■□□□ 1.26
SNX27-204ENST00000458013 CACNA2D4Q7Z3S7 1137 aa22.9■■□□□ 1.26
SNX27-204ENST00000458013 IFIT1P09914 478 aaKnown RBP22.9■■□□□ 1.26
SNX27-204ENST00000458013 USP25Q9UHP3 1055 aa22.9■■□□□ 1.26
SNX27-204ENST00000458013 C16orf45Q96MC5 204 aaPredicted RBP22.89■■□□□ 1.26
SNX27-204ENST00000458013 CEP131Q9UPN4 1083 aa22.89■■□□□ 1.26
SNX27-204ENST00000458013 MPRIPQ6WCQ1 1025 aa22.89■■□□□ 1.26
SNX27-204ENST00000458013 VAT1LQ9HCJ6 419 aa22.89■■□□□ 1.26
SNX27-204ENST00000458013 TXLNBQ8N3L3 684 aa22.89■■□□□ 1.25
SNX27-204ENST00000458013 WASF1Q92558 559 aa22.89■■□□□ 1.25
SNX27-204ENST00000458013 SCAPERQ9BY12 1400 aa22.89■■□□□ 1.25
SNX27-204ENST00000458013 TFIP11Q9UBB9 837 aaKnown RBP22.89■■□□□ 1.25
SNX27-204ENST00000458013 TERF1P54274 439 aa22.88■■□□□ 1.25
SNX27-204ENST00000458013 SLFN5Q08AF3 891 aa22.88■■□□□ 1.25
SNX27-204ENST00000458013 NFE2L2Q16236 605 aa22.88■■□□□ 1.25
SNX27-204ENST00000458013 RNF187Q5TA31 235 aaPredicted RBP22.88■■□□□ 1.25
SNX27-204ENST00000458013 EZRP15311 586 aaKnown RBP22.88■■□□□ 1.25
SNX27-204ENST00000458013 ANKRD30BQ9BXX2 1392 aa22.88■■□□□ 1.25
SNX27-204ENST00000458013 KIF4BQ2VIQ3 1234 aa22.87■■□□□ 1.25
SNX27-204ENST00000458013 C9orf84Q5VXU9 1444 aa22.87■■□□□ 1.25
SNX27-204ENST00000458013 WDR78Q5VTH9 848 aa22.87■■□□□ 1.25
SNX27-204ENST00000458013 CRACR2AQ9BSW2 395 aa22.87■■□□□ 1.25
SNX27-204ENST00000458013 RAPGEF3O95398 923 aa22.87■■□□□ 1.25
SNX27-204ENST00000458013 TOP1P11387 765 aaKnown RBP22.87■■□□□ 1.25
SNX27-204ENST00000458013 GPTP24298 496 aa22.87■■□□□ 1.25
SNX27-204ENST00000458013 RBM25P49756 843 aaKnown RBP22.87■■□□□ 1.25
SNX27-204ENST00000458013 ANAPC15P60006 121 aa22.87■■□□□ 1.25
SNX27-204ENST00000458013 SERPINA10Q9UK55 444 aa22.87■■□□□ 1.25
SNX27-204ENST00000458013 KRT32Q14532 448 aa22.86■■□□□ 1.25
SNX27-204ENST00000458013 C8orf76Q96K31 380 aa22.86■■□□□ 1.25
SNX27-204ENST00000458013 HAND2P61296 217 aa22.86■■□□□ 1.25
SNX27-204ENST00000458013 NAPBQ9H115 298 aa22.86■■□□□ 1.25
SNX27-204ENST00000458013 PRKCSHP14314 528 aaPredicted RBP22.86■■□□□ 1.25
SNX27-204ENST00000458013 CCDC183Q5T5S1 534 aa22.86■■□□□ 1.25
SNX27-204ENST00000458013 DZIP1Q86YF9 867 aaKnown RBP22.86■■□□□ 1.25
SNX27-204ENST00000458013 ZNF692Q9BU19 519 aaPredicted RBP22.85■■□□□ 1.25
SNX27-204ENST00000458013 IFFO1Q0D2I5 559 aa22.85■■□□□ 1.25
SNX27-204ENST00000458013 TAF7Q15545 349 aaPredicted RBP22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms