RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 TTC22Q5TAA0 569 aa20.73■□□□□ 0.91
CCDC43-202ENST00000457422 LMOD2Q6P5Q4 547 aa20.73■□□□□ 0.91
CCDC43-202ENST00000457422 ALS2Q96Q42 1657 aa20.73■□□□□ 0.91
CCDC43-202ENST00000457422 OVOS2A0A0G2JMS6 1433 aa20.73■□□□□ 0.91
CCDC43-202ENST00000457422 FRAT2O75474 233 aaPredicted RBP20.73■□□□□ 0.91
CCDC43-202ENST00000457422 HOXB7P09629 217 aa20.73■□□□□ 0.91
CCDC43-202ENST00000457422 GNAI2P04899 355 aa20.72■□□□□ 0.91
CCDC43-202ENST00000457422 AKAP4Q5JQC9 854 aa20.72■□□□□ 0.91
CCDC43-202ENST00000457422 C16orf71Q8IYS4 520 aaPredicted RBP20.72■□□□□ 0.91
CCDC43-202ENST00000457422 LMTK3Q96Q04 1460 aa20.71■□□□□ 0.91
CCDC43-202ENST00000457422 KRT28Q7Z3Y7 464 aa20.71■□□□□ 0.91
CCDC43-202ENST00000457422 SNX21Q969T3 373 aa20.71■□□□□ 0.91
CCDC43-202ENST00000457422 C19orf44Q9H6X5 657 aa20.71■□□□□ 0.91
CCDC43-202ENST00000457422 LGR6Q9HBX8 967 aa20.71■□□□□ 0.91
CCDC43-202ENST00000457422 GNAI3P08754 354 aa20.71■□□□□ 0.91
CCDC43-202ENST00000457422 AMOTQ4VCS5 1084 aa20.71■□□□□ 0.91
CCDC43-202ENST00000457422 PLEKHO1Q53GL0 409 aaPredicted RBP20.71■□□□□ 0.91
CCDC43-202ENST00000457422 BCL11AQ9H165 835 aa20.71■□□□□ 0.91
CCDC43-202ENST00000457422 SMARCA5O60264 1052 aaPredicted RBP20.7■□□□□ 0.9
CCDC43-202ENST00000457422 HDGFL1Q5TGJ6 251 aa20.7■□□□□ 0.9
CCDC43-202ENST00000457422 ZNF530Q6P9A1 599 aaPredicted RBP20.7■□□□□ 0.9
CCDC43-202ENST00000457422 OTUD7AQ8TE49 926 aaPredicted RBP20.7■□□□□ 0.9
CCDC43-202ENST00000457422 CHMP4AQ9BY43 222 aa20.69■□□□□ 0.9
CCDC43-202ENST00000457422 PXDNQ92626 1479 aa20.69■□□□□ 0.9
CCDC43-202ENST00000457422 APBB1O00213 710 aa20.69■□□□□ 0.9
CCDC43-202ENST00000457422 EIF4A1P60842 406 aaKnown RBP20.69■□□□□ 0.9
CCDC43-202ENST00000457422 HSCBQ8IWL3 235 aa20.69■□□□□ 0.9
CCDC43-202ENST00000457422 ANKRD24Q8TF21 1146 aa20.69■□□□□ 0.9
CCDC43-202ENST00000457422 NCOA3Q9Y6Q9 1424 aa20.68■□□□□ 0.9
CCDC43-202ENST00000457422 DCCP43146 1447 aa20.68■□□□□ 0.9
CCDC43-202ENST00000457422 ADAMTS7Q9UKP4 1686 aa20.67■□□□□ 0.9
CCDC43-202ENST00000457422 KIF2CQ99661 725 aa20.67■□□□□ 0.9
CCDC43-202ENST00000457422 SIPA1L3O60292 1781 aaPredicted RBP20.67■□□□□ 0.9
CCDC43-202ENST00000457422 RGPD5Q99666 1765 aa20.67■□□□□ 0.9
CCDC43-202ENST00000457422 OSBPL3Q9H4L5 887 aa20.66■□□□□ 0.9
CCDC43-202ENST00000457422 GSE1Q14687 1217 aa20.66■□□□□ 0.9
CCDC43-202ENST00000457422 MPRIPQ6WCQ1 1025 aa20.65■□□□□ 0.9
CCDC43-202ENST00000457422 SPRYD3Q8NCJ5 442 aa20.65■□□□□ 0.9
CCDC43-202ENST00000457422 STRCP1A6NGW2 1772 aa20.65■□□□□ 0.9
CCDC43-202ENST00000457422 KCNQ3O43525 872 aa20.65■□□□□ 0.9
CCDC43-202ENST00000457422 ATP8B2P98198 1209 aa20.65■□□□□ 0.9
CCDC43-202ENST00000457422 TEFQ10587 303 aa20.65■□□□□ 0.9
CCDC43-202ENST00000457422 PHAXQ9H814 394 aaKnown RBP20.65■□□□□ 0.9
CCDC43-202ENST00000457422 AXIN2Q9Y2T1 843 aa20.65■□□□□ 0.9
CCDC43-202ENST00000457422 TUBGCP6Q96RT7 1819 aa20.64■□□□□ 0.89
CCDC43-202ENST00000457422 RNMTO43148 476 aaKnown RBP20.63■□□□□ 0.89
CCDC43-202ENST00000457422 BTBD11A6QL63 1104 aa20.63■□□□□ 0.89
CCDC43-202ENST00000457422 EIF2S2P20042 333 aaKnown RBP20.63■□□□□ 0.89
CCDC43-202ENST00000457422 C1orf141Q5JVX7 400 aa20.63■□□□□ 0.89
CCDC43-202ENST00000457422 CHMP5Q9NZZ3 219 aa20.63■□□□□ 0.89
CCDC43-202ENST00000457422 TMEM94Q12767 1356 aa20.63■□□□□ 0.89
CCDC43-202ENST00000457422 SDSP20132 328 aa20.62■□□□□ 0.89
CCDC43-202ENST00000457422 USP44Q9H0E7 712 aa20.62■□□□□ 0.89
CCDC43-202ENST00000457422 LRRFIP2Q9Y608 721 aaKnown RBP20.62■□□□□ 0.89
CCDC43-202ENST00000457422 ERBB3P21860 1342 aa20.61■□□□□ 0.89
CCDC43-202ENST00000457422 SALL3Q9BXA9 1300 aa20.61■□□□□ 0.89
CCDC43-202ENST00000457422 ATF3P18847 181 aa20.61■□□□□ 0.89
CCDC43-202ENST00000457422 CHPF2Q9P2E5 772 aa20.61■□□□□ 0.89
CCDC43-202ENST00000457422 EXOC6BQ9Y2D4 811 aa20.61■□□□□ 0.89
CCDC43-202ENST00000457422 IBTKQ9P2D0 1353 aaPredicted RBP20.61■□□□□ 0.89
CCDC43-202ENST00000457422 ABCC6O95255 1503 aa20.61■□□□□ 0.89
CCDC43-202ENST00000457422 CRYBG1Q9Y4K1 1723 aa20.61■□□□□ 0.89
CCDC43-202ENST00000457422 HEG1Q9ULI3 1381 aa20.6■□□□□ 0.89
CCDC43-202ENST00000457422 PNMA6EA0A0J9YXQ4 647 aa20.6■□□□□ 0.89
CCDC43-202ENST00000457422 DDIT3P35638 169 aa20.6■□□□□ 0.89
CCDC43-202ENST00000457422 PDE1AP54750 535 aa20.6■□□□□ 0.89
CCDC43-202ENST00000457422 ZC3H6P61129 1189 aaKnown RBP20.6■□□□□ 0.89
CCDC43-202ENST00000457422 UBTFL1P0CB47 393 aaPredicted RBP20.59■□□□□ 0.89
CCDC43-202ENST00000457422 CASC1Q6TDU7 716 aa20.59■□□□□ 0.89
CCDC43-202ENST00000457422 LRRCC1Q9C099 1032 aa20.59■□□□□ 0.89
CCDC43-202ENST00000457422 COL18A1P39060 1754 aa20.59■□□□□ 0.89
CCDC43-202ENST00000457422 DDX17Q92841 729 aaKnown RBP20.58■□□□□ 0.89
CCDC43-202ENST00000457422 SRCIN1Q9C0H9 1055 aa20.58■□□□□ 0.89
CCDC43-202ENST00000457422 PLEKHG2Q9H7P9 1386 aa20.57■□□□□ 0.88
CCDC43-202ENST00000457422 SSH3Q8TE77 659 aa20.57■□□□□ 0.88
CCDC43-202ENST00000457422 USP26Q9BXU7 913 aa20.57■□□□□ 0.88
CCDC43-202ENST00000457422 SCN11AQ9UI33 1791 aa20.56■□□□□ 0.88
CCDC43-202ENST00000457422 DNAAF4Q8WXU2 420 aa20.56■□□□□ 0.88
CCDC43-202ENST00000457422 ANXA1P04083 346 aa20.55■□□□□ 0.88
CCDC43-202ENST00000457422 BEND3Q5T5X7 828 aa20.55■□□□□ 0.88
CCDC43-202ENST00000457422 DBF4Q9UBU7 674 aaPredicted RBP20.55■□□□□ 0.88
CCDC43-202ENST00000457422 CIZ1Q9ULV3 898 aaPredicted RBP20.55■□□□□ 0.88
CCDC43-202ENST00000457422 GIGYF1O75420 1035 aaPredicted RBP20.54■□□□□ 0.88
CCDC43-202ENST00000457422 POLA2Q14181 598 aa20.54■□□□□ 0.88
CCDC43-202ENST00000457422 RBM42Q9BTD8 480 aaKnown RBP20.54■□□□□ 0.88
CCDC43-202ENST00000457422 ADCY9O60503 1353 aa20.54■□□□□ 0.88
CCDC43-202ENST00000457422 K7ELQ4 463 aaPredicted RBP20.54■□□□□ 0.88
CCDC43-202ENST00000457422 CD2BP2O95400 341 aaKnown RBP20.54■□□□□ 0.88
CCDC43-202ENST00000457422 HSP90AB1P08238 724 aaKnown RBP20.54■□□□□ 0.88
CCDC43-202ENST00000457422 RABEP1Q15276 862 aa20.54■□□□□ 0.88
CCDC43-202ENST00000457422 STAP2Q9UGK3 403 aa20.54■□□□□ 0.88
CCDC43-202ENST00000457422 PI4KAP2A4QPH2 592 aa20.53■□□□□ 0.88
CCDC43-202ENST00000457422 MX1P20591 662 aa20.53■□□□□ 0.88
CCDC43-202ENST00000457422 PI4KAP1Q8N8J0 262 aa20.53■□□□□ 0.88
CCDC43-202ENST00000457422 NPHP3Q7Z494 1330 aa20.53■□□□□ 0.88
CCDC43-202ENST00000457422 TNS3Q68CZ2 1445 aa20.53■□□□□ 0.88
CCDC43-202ENST00000457422 AOX1Q06278 1338 aa20.52■□□□□ 0.88
CCDC43-202ENST00000457422 REC8O95072 547 aa20.52■□□□□ 0.88
CCDC43-202ENST00000457422 TSHZ3Q63HK5 1081 aa20.52■□□□□ 0.88
CCDC43-202ENST00000457422 CADPS2Q86UW7 1296 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms