RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 SLC16A10Q8TF71 515 aa30.87■■■□□ 2.53
CBX3-204ENST00000456948 MTFR1LQ9H019 292 aa30.87■■■□□ 2.53
CBX3-204ENST00000456948 RSPH6AQ9H0K4 717 aa30.87■■■□□ 2.53
CBX3-204ENST00000456948 GNAT3A8MTJ3 354 aa30.86■■■□□ 2.53
CBX3-204ENST00000456948 FLAD1Q8NFF5 587 aa30.86■■■□□ 2.53
CBX3-204ENST00000456948 RNMTO43148 476 aaKnown RBP30.85■■■□□ 2.53
CBX3-204ENST00000456948 AK7Q96M32 723 aa30.85■■■□□ 2.53
CBX3-204ENST00000456948 RBM42Q9BTD8 480 aaKnown RBP30.85■■■□□ 2.53
CBX3-204ENST00000456948 SLC52A2Q9HAB3 445 aa30.84■■■□□ 2.53
CBX3-204ENST00000456948 MYBBP1AQ9BQG0 1328 aaKnown RBP30.83■■■□□ 2.53
CBX3-204ENST00000456948 LGR6Q9HBX8 967 aa30.83■■■□□ 2.53
CBX3-204ENST00000456948 ZNF316A6NFI3 1004 aaPredicted RBP30.82■■■□□ 2.52
CBX3-204ENST00000456948 MSH5O43196 834 aa30.82■■■□□ 2.52
CBX3-204ENST00000456948 SCN11AQ9UI33 1791 aa30.82■■■□□ 2.52
CBX3-204ENST00000456948 MAP3K5Q99683 1374 aa30.81■■■□□ 2.52
CBX3-204ENST00000456948 PTGER2P43116 358 aa30.8■■■□□ 2.52
CBX3-204ENST00000456948 C5P01031 1676 aa30.8■■■□□ 2.52
CBX3-204ENST00000456948 PNPLA7Q6ZV29 1317 aa30.79■■■□□ 2.52
CBX3-204ENST00000456948 TEFQ10587 303 aa30.79■■■□□ 2.52
CBX3-204ENST00000456948 RTF1Q92541 710 aaKnown RBP30.79■■■□□ 2.52
CBX3-204ENST00000456948 PHACTR3Q96KR7 559 aa30.79■■■□□ 2.52
CBX3-204ENST00000456948 QSER1Q2KHR3 1735 aa30.78■■■□□ 2.52
CBX3-204ENST00000456948 TAF1LQ8IZX4 1826 aa30.76■■■□□ 2.51
CBX3-204ENST00000456948 PTCD1O75127 700 aaKnown RBP30.76■■■□□ 2.51
CBX3-204ENST00000456948 POLD1P28340 1107 aa30.75■■■□□ 2.51
CBX3-204ENST00000456948 LINC00116Q8NCU8 138 aa30.74■■■□□ 2.51
CBX3-204ENST00000456948 ITPK1Q13572 414 aa30.73■■■□□ 2.51
CBX3-204ENST00000456948 TTC5Q8N0Z6 440 aa30.73■■■□□ 2.51
CBX3-204ENST00000456948 PRKRIP1Q9H875 184 aaPredicted RBP30.73■■■□□ 2.51
CBX3-204ENST00000456948 TUBGCP6Q96RT7 1819 aa30.73■■■□□ 2.51
CBX3-204ENST00000456948 C4BP0C0L5 1744 aa30.73■■■□□ 2.51
CBX3-204ENST00000456948 MAPK8IP3Q9UPT6 1336 aa30.73■■■□□ 2.51
CBX3-204ENST00000456948 DCAF8L1A6NGE4 600 aa30.72■■■□□ 2.51
CBX3-204ENST00000456948 HTATSF1O43719 755 aaKnown RBP30.72■■■□□ 2.51
CBX3-204ENST00000456948 SSFA2P28290 1259 aa30.72■■■□□ 2.51
CBX3-204ENST00000456948 COL23A1Q86Y22 540 aaPredicted RBP30.72■■■□□ 2.51
CBX3-204ENST00000456948 IL17REQ8NFR9 667 aa30.71■■■□□ 2.51
CBX3-204ENST00000456948 GNPATO15228 680 aa30.7■■■□□ 2.51
CBX3-204ENST00000456948 RC3H1Q5TC82 1133 aaKnown RBP30.7■■■□□ 2.51
CBX3-204ENST00000456948 SGIP1Q9BQI5 828 aa30.7■■■□□ 2.51
CBX3-204ENST00000456948 VIRMAQ69YN4 1812 aaKnown RBP30.7■■■□□ 2.5
CBX3-204ENST00000456948 MRC1P22897 1456 aa30.7■■■□□ 2.5
CBX3-204ENST00000456948 ZNF831Q5JPB2 1677 aa30.69■■■□□ 2.5
CBX3-204ENST00000456948 ARXQ96QS3 562 aa30.69■■■□□ 2.5
CBX3-204ENST00000456948 RTCBQ9Y3I0 505 aaKnown RBP30.69■■■□□ 2.5
CBX3-204ENST00000456948 WDR43Q15061 677 aaKnown RBP eCLIP30.68■■■□□ 2.5
CBX3-204ENST00000456948 FHDC1Q9C0D6 1143 aaPredicted RBP30.68■■■□□ 2.5
CBX3-204ENST00000456948 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.67■■■□□ 2.5
CBX3-204ENST00000456948 PHF14O94880 888 aa30.67■■■□□ 2.5
CBX3-204ENST00000456948 SLC4A9Q96Q91 983 aa30.67■■■□□ 2.5
CBX3-204ENST00000456948 ADAMTS7Q9UKP4 1686 aa30.67■■■□□ 2.5
CBX3-204ENST00000456948 SLC39A6Q13433 755 aa30.66■■■□□ 2.5
CBX3-204ENST00000456948 TRAPPC3LQ5T215 181 aa30.66■■■□□ 2.5
CBX3-204ENST00000456948 CNTNAP4Q9C0A0 1308 aa30.66■■■□□ 2.5
CBX3-204ENST00000456948 VSIG10Q8N0Z9 540 aa30.65■■■□□ 2.5
CBX3-204ENST00000456948 ADRA2BP18089 450 aa30.64■■■□□ 2.5
CBX3-204ENST00000456948 CEMIPQ8WUJ3 1361 aa30.64■■■□□ 2.5
CBX3-204ENST00000456948 BTBD11A6QL63 1104 aa30.63■■■□□ 2.49
CBX3-204ENST00000456948 PLEKHF1Q96S99 279 aa30.63■■■□□ 2.49
CBX3-204ENST00000456948 SYT17Q9BSW7 474 aa30.63■■■□□ 2.49
CBX3-204ENST00000456948 ZNF790Q6PG37 636 aa30.62■■■□□ 2.49
CBX3-204ENST00000456948 KLHL34Q8N239 644 aa30.62■■■□□ 2.49
CBX3-204ENST00000456948 RPS6KA4O75676 772 aa30.61■■■□□ 2.49
CBX3-204ENST00000456948 NFE2L2Q16236 605 aa30.61■■■□□ 2.49
CBX3-204ENST00000456948 TEX13AQ9BXU3 409 aaPredicted RBP30.61■■■□□ 2.49
CBX3-204ENST00000456948 UBR3Q6ZT12 1888 aa30.6■■■□□ 2.49
CBX3-204ENST00000456948 MCM10Q7L590 875 aa30.6■■■□□ 2.49
CBX3-204ENST00000456948 CRKLP46109 303 aaKnown RBP30.59■■■□□ 2.49
CBX3-204ENST00000456948 STARD3NLO95772 234 aa30.58■■■□□ 2.49
CBX3-204ENST00000456948 RFC4P35249 363 aa30.58■■■□□ 2.49
CBX3-204ENST00000456948 FMNL2Q96PY5 1086 aa30.58■■■□□ 2.49
CBX3-204ENST00000456948 ANP32CO43423 234 aa30.57■■■□□ 2.48
CBX3-204ENST00000456948 MSL1Q68DK7 614 aa30.57■■■□□ 2.48
CBX3-204ENST00000456948 DNAJC10Q8IXB1 793 aa30.57■■■□□ 2.48
CBX3-204ENST00000456948 TAF7Q15545 349 aaPredicted RBP30.56■■■□□ 2.48
CBX3-204ENST00000456948 CCDC87Q9NVE4 849 aa30.56■■■□□ 2.48
CBX3-204ENST00000456948 LMOD3Q0VAK6 560 aa30.55■■■□□ 2.48
CBX3-204ENST00000456948 PNISRQ8TF01 805 aaKnown RBP30.55■■■□□ 2.48
CBX3-204ENST00000456948 COL5A3P25940 1745 aaPredicted RBP30.55■■■□□ 2.48
CBX3-204ENST00000456948 DCTN1Q14203 1278 aa30.54■■■□□ 2.48
CBX3-204ENST00000456948 AMIGO3Q86WK7 504 aa30.54■■■□□ 2.48
CBX3-204ENST00000456948 SMIM5Q71RC9 77 aa30.53■■■□□ 2.48
CBX3-204ENST00000456948 NLGN1Q8N2Q7 840 aa30.53■■■□□ 2.48
CBX3-204ENST00000456948 ARHGEF1Q92888 912 aaKnown RBP30.53■■■□□ 2.48
CBX3-204ENST00000456948 ZNF496Q96IT1 587 aaPredicted RBP30.53■■■□□ 2.48
CBX3-204ENST00000456948 CYP19A1P11511 503 aaPredicted RBP30.52■■■□□ 2.48
CBX3-204ENST00000456948 RUNDC1Q96C34 613 aa30.52■■■□□ 2.48
CBX3-204ENST00000456948 KCPQ6ZWJ8 1503 aa30.52■■■□□ 2.48
CBX3-204ENST00000456948 CICQ96RK0 1608 aaPredicted RBP30.51■■■□□ 2.48
CBX3-204ENST00000456948 COL24A1Q17RW2 1714 aa30.51■■■□□ 2.47
CBX3-204ENST00000456948 RIPK4P57078 832 aa30.51■■■□□ 2.47
CBX3-204ENST00000456948 HEG1Q9ULI3 1381 aa30.51■■■□□ 2.47
CBX3-204ENST00000456948 SIPA1L3O60292 1781 aaPredicted RBP30.51■■■□□ 2.47
CBX3-204ENST00000456948 INTS5Q6P9B9 1019 aaKnown RBP30.5■■■□□ 2.47
CBX3-204ENST00000456948 NPM2Q86SE8 214 aaKnown RBP30.5■■■□□ 2.47
CBX3-204ENST00000456948 ADAMTS8Q9UP79 889 aa30.5■■■□□ 2.47
CBX3-204ENST00000456948 YY1P25490 414 aa30.49■■■□□ 2.47
CBX3-204ENST00000456948 MYH14Q7Z406 1995 aaKnown RBP30.48■■■□□ 2.47
CBX3-204ENST00000456948 TJP1Q07157 1748 aa30.48■■■□□ 2.47
CBX3-204ENST00000456948 UBR2Q8IWV8 1755 aa30.47■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms