RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 APBA3O96018 575 aa23.45■■□□□ 1.34
FAM239A-203ENST00000456563 THUMPD2Q9BTF0 503 aaKnown RBP23.45■■□□□ 1.34
FAM239A-203ENST00000456563 VIRMAQ69YN4 1812 aaKnown RBP23.45■■□□□ 1.34
FAM239A-203ENST00000456563 PLSCR1O15162 318 aa23.44■■□□□ 1.34
FAM239A-203ENST00000456563 BTAF1O14981 1849 aa23.43■■□□□ 1.34
FAM239A-203ENST00000456563 SENP3-EIF4A1A0A087X0R7 540 aa23.42■■□□□ 1.34
FAM239A-203ENST00000456563 BAG6P46379 1132 aa23.42■■□□□ 1.34
FAM239A-203ENST00000456563 TAF7Q15545 349 aaPredicted RBP23.42■■□□□ 1.34
FAM239A-203ENST00000456563 SMARCC1Q92922 1105 aaPredicted RBP23.42■■□□□ 1.34
FAM239A-203ENST00000456563 WWC1Q8IX03 1113 aa23.41■■□□□ 1.34
FAM239A-203ENST00000456563 ATG3Q9NT62 314 aa23.41■■□□□ 1.34
FAM239A-203ENST00000456563 ASAP1Q9ULH1 1129 aa23.41■■□□□ 1.34
FAM239A-203ENST00000456563 SIPA1L3O60292 1781 aaPredicted RBP23.4■■□□□ 1.34
FAM239A-203ENST00000456563 BTBD11A6QL63 1104 aa23.39■■□□□ 1.33
FAM239A-203ENST00000456563 CALD1Q05682 793 aaKnown RBP23.39■■□□□ 1.33
FAM239A-203ENST00000456563 SALL2Q9Y467 1007 aaPredicted RBP23.39■■□□□ 1.33
FAM239A-203ENST00000456563 PALLDQ8WX93 1383 aa23.39■■□□□ 1.33
FAM239A-203ENST00000456563 SOCS7O14512 581 aa23.38■■□□□ 1.33
FAM239A-203ENST00000456563 BABAM1Q9NWV8 329 aa23.38■■□□□ 1.33
FAM239A-203ENST00000456563 EN1Q05925 392 aaPredicted RBP23.37■■□□□ 1.33
FAM239A-203ENST00000456563 SLC39A6Q13433 755 aa23.37■■□□□ 1.33
FAM239A-203ENST00000456563 DEFB132Q7Z7B7 95 aa23.37■■□□□ 1.33
FAM239A-203ENST00000456563 CAMKK2Q96RR4 588 aa23.37■■□□□ 1.33
FAM239A-203ENST00000456563 ZNF790Q6PG37 636 aa23.36■■□□□ 1.33
FAM239A-203ENST00000456563 WDR63Q8IWG1 891 aa23.36■■□□□ 1.33
FAM239A-203ENST00000456563 PAPPAQ13219 1627 aa23.35■■□□□ 1.33
FAM239A-203ENST00000456563 RGPD3A6NKT7 1758 aaPredicted RBP23.35■■□□□ 1.33
FAM239A-203ENST00000456563 RGPD4Q7Z3J3 1758 aa23.35■■□□□ 1.33
FAM239A-203ENST00000456563 ZNF521Q96K83 1311 aa23.34■■□□□ 1.33
FAM239A-203ENST00000456563 CHL1O00533 1208 aa23.34■■□□□ 1.33
FAM239A-203ENST00000456563 TTC5Q8N0Z6 440 aa23.34■■□□□ 1.33
FAM239A-203ENST00000456563 CFAP44Q96MT7 982 aa23.34■■□□□ 1.33
FAM239A-203ENST00000456563 IL16Q14005 1332 aa23.33■■□□□ 1.33
FAM239A-203ENST00000456563 ZNF853P0CG23 659 aa23.33■■□□□ 1.33
FAM239A-203ENST00000456563 EZH2Q15910 746 aaKnown RBP23.33■■□□□ 1.33
FAM239A-203ENST00000456563 TXNRD1Q16881 649 aa23.33■■□□□ 1.33
FAM239A-203ENST00000456563 PROM2Q8N271 834 aa23.33■■□□□ 1.33
FAM239A-203ENST00000456563 IFT57Q9NWB7 429 aa23.33■■□□□ 1.33
FAM239A-203ENST00000456563 MIS18AQ9NYP9 233 aa23.33■■□□□ 1.33
FAM239A-203ENST00000456563 LOC102724428A0A0B4J2F2 783 aa23.32■■□□□ 1.32
FAM239A-203ENST00000456563 KCNQ3O43525 872 aa23.32■■□□□ 1.32
FAM239A-203ENST00000456563 SIK1P57059 783 aa23.32■■□□□ 1.32
FAM239A-203ENST00000456563 SLC27A3Q5K4L6 730 aa23.32■■□□□ 1.32
FAM239A-203ENST00000456563 TSPYL4Q9UJ04 414 aa23.32■■□□□ 1.32
FAM239A-203ENST00000456563 LY75O60449 1722 aa23.31■■□□□ 1.32
FAM239A-203ENST00000456563 PTCD1O75127 700 aaKnown RBP23.31■■□□□ 1.32
FAM239A-203ENST00000456563 GNAI1P63096 354 aa23.31■■□□□ 1.32
FAM239A-203ENST00000456563 HNRNPUQ00839 825 aaKnown RBP eCLIP23.31■■□□□ 1.32
FAM239A-203ENST00000456563 RBM42Q9BTD8 480 aaKnown RBP23.31■■□□□ 1.32
FAM239A-203ENST00000456563 LAS1LQ9Y4W2 734 aaKnown RBP23.31■■□□□ 1.32
FAM239A-203ENST00000456563 KCPQ6ZWJ8 1503 aa23.3■■□□□ 1.32
FAM239A-203ENST00000456563 CCNL1Q9UK58 526 aaPredicted RBP23.3■■□□□ 1.32
FAM239A-203ENST00000456563 VSIG10Q8N0Z9 540 aa23.29■■□□□ 1.32
FAM239A-203ENST00000456563 ZNF496Q96IT1 587 aaPredicted RBP23.29■■□□□ 1.32
FAM239A-203ENST00000456563 FMNL2Q96PY5 1086 aa23.29■■□□□ 1.32
FAM239A-203ENST00000456563 SLC4A9Q96Q91 983 aa23.29■■□□□ 1.32
FAM239A-203ENST00000456563 KDM3BQ7LBC6 1761 aa23.28■■□□□ 1.32
FAM239A-203ENST00000456563 UBR2Q8IWV8 1755 aa23.28■■□□□ 1.32
FAM239A-203ENST00000456563 LRRC4BQ9NT99 713 aa23.28■■□□□ 1.32
FAM239A-203ENST00000456563 HMGB2P26583 209 aaKnown RBP23.27■■□□□ 1.32
FAM239A-203ENST00000456563 ATP6V1AP38606 617 aa23.27■■□□□ 1.32
FAM239A-203ENST00000456563 EIF4A1P60842 406 aaKnown RBP23.27■■□□□ 1.32
FAM239A-203ENST00000456563 MBIPQ9NS73 344 aa23.27■■□□□ 1.32
FAM239A-203ENST00000456563 HEG1Q9ULI3 1381 aa23.27■■□□□ 1.31
FAM239A-203ENST00000456563 ZNF831Q5JPB2 1677 aa23.26■■□□□ 1.31
FAM239A-203ENST00000456563 KCNQ4P56696 695 aa23.25■■□□□ 1.31
FAM239A-203ENST00000456563 GOLGA2Q08379 1002 aa23.25■■□□□ 1.31
FAM239A-203ENST00000456563 RREB1Q92766 1687 aa23.25■■□□□ 1.31
FAM239A-203ENST00000456563 ITPK1Q13572 414 aa23.24■■□□□ 1.31
FAM239A-203ENST00000456563 SPINK5Q9NQ38 1064 aaPredicted RBP23.24■■□□□ 1.31
FAM239A-203ENST00000456563 CICQ96RK0 1608 aaPredicted RBP23.22■■□□□ 1.31
FAM239A-203ENST00000456563 SNRPA1P09661 255 aaKnown RBP23.22■■□□□ 1.31
FAM239A-203ENST00000456563 TEX13AQ9BXU3 409 aaPredicted RBP23.22■■□□□ 1.31
FAM239A-203ENST00000456563 GIGYF1O75420 1035 aaPredicted RBP23.21■■□□□ 1.31
FAM239A-203ENST00000456563 DNAJC10Q8IXB1 793 aa23.21■■□□□ 1.31
FAM239A-203ENST00000456563 LINC00116Q8NCU8 138 aa23.21■■□□□ 1.31
FAM239A-203ENST00000456563 TSR2Q969E8 191 aaKnown RBP23.21■■□□□ 1.31
FAM239A-203ENST00000456563 MYH16Q9H6N6 1097 aa23.21■■□□□ 1.31
FAM239A-203ENST00000456563 ZBED9Q6R2W3 1325 aa23.21■■□□□ 1.31
FAM239A-203ENST00000456563 E9PSI1 815 aa23.2■■□□□ 1.3
FAM239A-203ENST00000456563 NUP188Q5SRE5 1749 aa23.19■■□□□ 1.3
FAM239A-203ENST00000456563 FANCIQ9NVI1 1328 aa23.19■■□□□ 1.3
FAM239A-203ENST00000456563 SLFN5Q08AF3 891 aa23.19■■□□□ 1.3
FAM239A-203ENST00000456563 TJP1Q07157 1748 aa23.19■■□□□ 1.3
FAM239A-203ENST00000456563 CYP19A1P11511 503 aaPredicted RBP23.18■■□□□ 1.3
FAM239A-203ENST00000456563 C5P01031 1676 aa23.17■■□□□ 1.3
FAM239A-203ENST00000456563 PRAMEF22A3QJZ6 481 aa23.17■■□□□ 1.3
FAM239A-203ENST00000456563 STARD3NLO95772 234 aa23.17■■□□□ 1.3
FAM239A-203ENST00000456563 KRT24Q2M2I5 525 aa23.17■■□□□ 1.3
FAM239A-203ENST00000456563 RC3H1Q5TC82 1133 aaKnown RBP23.17■■□□□ 1.3
FAM239A-203ENST00000456563 CDCA7LQ96GN5 454 aa23.17■■□□□ 1.3
FAM239A-203ENST00000456563 USP16Q9Y5T5 823 aa23.17■■□□□ 1.3
FAM239A-203ENST00000456563 TAF1LQ8IZX4 1826 aa23.17■■□□□ 1.3
FAM239A-203ENST00000456563 CNTNAP4Q9C0A0 1308 aa23.16■■□□□ 1.3
FAM239A-203ENST00000456563 HOXB7P09629 217 aa23.16■■□□□ 1.3
FAM239A-203ENST00000456563 NBPF14Q5TI25 921 aa23.16■■□□□ 1.3
FAM239A-203ENST00000456563 TRMT2AQ8IZ69 625 aaKnown RBP23.16■■□□□ 1.3
FAM239A-203ENST00000456563 AKT1S1Q96B36 256 aa23.16■■□□□ 1.3
FAM239A-203ENST00000456563 ANO8Q9HCE9 1232 aaPredicted RBP23.15■■□□□ 1.3
FAM239A-203ENST00000456563 COL5A3P25940 1745 aaPredicted RBP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms