RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 NBPF6Q5VWK0 638 aa22.74■■□□□ 1.23
SEMA3B-209ENST00000456560 NBPF4Q96M43 638 aa22.74■■□□□ 1.23
SEMA3B-209ENST00000456560 N4BP2Q86UW6 1770 aaPredicted RBP22.74■■□□□ 1.23
SEMA3B-209ENST00000456560 PSME1Q06323 249 aa22.74■■□□□ 1.23
SEMA3B-209ENST00000456560 FKBP5Q13451 457 aaPredicted RBP22.74■■□□□ 1.23
SEMA3B-209ENST00000456560 ESCO1Q5FWF5 840 aa22.74■■□□□ 1.23
SEMA3B-209ENST00000456560 SDSP20132 328 aa22.73■■□□□ 1.23
SEMA3B-209ENST00000456560 KCNH5Q8NCM2 988 aa22.73■■□□□ 1.23
SEMA3B-209ENST00000456560 MED1Q15648 1581 aaPredicted RBP22.73■■□□□ 1.23
SEMA3B-209ENST00000456560 APBB1O00213 710 aa22.73■■□□□ 1.23
SEMA3B-209ENST00000456560 CD2BP2O95400 341 aaKnown RBP22.73■■□□□ 1.23
SEMA3B-209ENST00000456560 GNAI3P08754 354 aa22.73■■□□□ 1.23
SEMA3B-209ENST00000456560 OSBPL3Q9H4L5 887 aa22.73■■□□□ 1.23
SEMA3B-209ENST00000456560 PXDNLA1KZ92 1463 aa22.72■■□□□ 1.23
SEMA3B-209ENST00000456560 NECTIN2Q92692 538 aa22.72■■□□□ 1.23
SEMA3B-209ENST00000456560 ZNF335Q9H4Z2 1342 aaPredicted RBP22.72■■□□□ 1.23
SEMA3B-209ENST00000456560 HSP90AB1P08238 724 aaKnown RBP22.72■■□□□ 1.23
SEMA3B-209ENST00000456560 RBM42Q9BTD8 480 aaKnown RBP22.72■■□□□ 1.23
SEMA3B-209ENST00000456560 CIZ1Q9ULV3 898 aaPredicted RBP22.72■■□□□ 1.23
SEMA3B-209ENST00000456560 USP26Q9BXU7 913 aa22.71■■□□□ 1.23
SEMA3B-209ENST00000456560 ATP8B2P98198 1209 aa22.7■■□□□ 1.23
SEMA3B-209ENST00000456560 FAM43AQ8N2R8 423 aa22.7■■□□□ 1.23
SEMA3B-209ENST00000456560 K7ELQ4 463 aaPredicted RBP22.69■■□□□ 1.22
SEMA3B-209ENST00000456560 TMEM94Q12767 1356 aa22.68■■□□□ 1.22
SEMA3B-209ENST00000456560 LGR6Q9HBX8 967 aa22.68■■□□□ 1.22
SEMA3B-209ENST00000456560 RGPD2P0DJD1 1756 aa22.68■■□□□ 1.22
SEMA3B-209ENST00000456560 SALL3Q9BXA9 1300 aa22.68■■□□□ 1.22
SEMA3B-209ENST00000456560 PDE1AP54750 535 aa22.67■■□□□ 1.22
SEMA3B-209ENST00000456560 HDGFL1Q5TGJ6 251 aa22.67■■□□□ 1.22
SEMA3B-209ENST00000456560 KDM3BQ7LBC6 1761 aa22.67■■□□□ 1.22
SEMA3B-209ENST00000456560 EIF4A1P60842 406 aaKnown RBP22.67■■□□□ 1.22
SEMA3B-209ENST00000456560 LMO7Q8WWI1 1683 aa22.67■■□□□ 1.22
SEMA3B-209ENST00000456560 SLIT3O75094 1523 aa22.67■■□□□ 1.22
SEMA3B-209ENST00000456560 PNMA6EA0A0J9YXQ4 647 aa22.66■■□□□ 1.22
SEMA3B-209ENST00000456560 RABEP1Q15276 862 aa22.66■■□□□ 1.22
SEMA3B-209ENST00000456560 USP44Q9H0E7 712 aa22.66■■□□□ 1.22
SEMA3B-209ENST00000456560 EXOC6BQ9Y2D4 811 aa22.66■■□□□ 1.22
SEMA3B-209ENST00000456560 CASC1Q6TDU7 716 aa22.66■■□□□ 1.22
SEMA3B-209ENST00000456560 NCAPD2Q15021 1401 aa22.66■■□□□ 1.22
SEMA3B-209ENST00000456560 HOXB7P09629 217 aa22.65■■□□□ 1.22
SEMA3B-209ENST00000456560 ORAI2Q96SN7 254 aa22.65■■□□□ 1.22
SEMA3B-209ENST00000456560 ARHGEF25Q86VW2 580 aa22.65■■□□□ 1.22
SEMA3B-209ENST00000456560 PHAXQ9H814 394 aaKnown RBP22.65■■□□□ 1.22
SEMA3B-209ENST00000456560 IBTKQ9P2D0 1353 aaPredicted RBP22.64■■□□□ 1.22
SEMA3B-209ENST00000456560 LRRC59Q96AG4 307 aaKnown RBP22.64■■□□□ 1.21
SEMA3B-209ENST00000456560 LRRFIP2Q9Y608 721 aaKnown RBP22.64■■□□□ 1.21
SEMA3B-209ENST00000456560 GCP02774 474 aa22.63■■□□□ 1.21
SEMA3B-209ENST00000456560 RAB3GAP1Q15042 981 aa22.63■■□□□ 1.21
SEMA3B-209ENST00000456560 AKAP4Q5JQC9 854 aa22.63■■□□□ 1.21
SEMA3B-209ENST00000456560 LRRCC1Q9C099 1032 aa22.63■■□□□ 1.21
SEMA3B-209ENST00000456560 PLEKHO1Q53GL0 409 aaPredicted RBP22.63■■□□□ 1.21
SEMA3B-209ENST00000456560 L1TD1Q5T7N2 865 aaKnown RBP22.63■■□□□ 1.21
SEMA3B-209ENST00000456560 ZBTB7CA1YPR0 619 aa22.62■■□□□ 1.21
SEMA3B-209ENST00000456560 TNPO1Q92973 898 aaKnown RBP22.62■■□□□ 1.21
SEMA3B-209ENST00000456560 TUBGCP6Q96RT7 1819 aa22.62■■□□□ 1.21
SEMA3B-209ENST00000456560 DDX11L8A8MPP1 907 aa22.61■■□□□ 1.21
SEMA3B-209ENST00000456560 ZNF530Q6P9A1 599 aaPredicted RBP22.61■■□□□ 1.21
SEMA3B-209ENST00000456560 TRAK2O60296 914 aa22.61■■□□□ 1.21
SEMA3B-209ENST00000456560 AMOTQ4VCS5 1084 aa22.61■■□□□ 1.21
SEMA3B-209ENST00000456560 KCNQ3O43525 872 aa22.6■■□□□ 1.21
SEMA3B-209ENST00000456560 REC8O95072 547 aa22.6■■□□□ 1.21
SEMA3B-209ENST00000456560 UBTFL1P0CB47 393 aaPredicted RBP22.6■■□□□ 1.21
SEMA3B-209ENST00000456560 SSH3Q8TE77 659 aa22.6■■□□□ 1.21
SEMA3B-209ENST00000456560 CHMP4AQ9BY43 222 aa22.6■■□□□ 1.21
SEMA3B-209ENST00000456560 C19orf44Q9H6X5 657 aa22.6■■□□□ 1.21
SEMA3B-209ENST00000456560 TRPM3Q9HCF6 1732 aaPredicted RBP22.6■■□□□ 1.21
SEMA3B-209ENST00000456560 ERC2O15083 957 aa22.59■■□□□ 1.21
SEMA3B-209ENST00000456560 STAP2Q9UGK3 403 aa22.59■■□□□ 1.21
SEMA3B-209ENST00000456560 EIF2S2P20042 333 aaKnown RBP22.59■■□□□ 1.21
SEMA3B-209ENST00000456560 XPCQ01831 940 aaPredicted RBP22.59■■□□□ 1.21
SEMA3B-209ENST00000456560 HSP90AA1P07900 732 aaKnown RBP22.58■■□□□ 1.21
SEMA3B-209ENST00000456560 MX1P20591 662 aa22.58■■□□□ 1.21
SEMA3B-209ENST00000456560 SRCIN1Q9C0H9 1055 aa22.58■■□□□ 1.21
SEMA3B-209ENST00000456560 CAMTA1Q9Y6Y1 1673 aa22.58■■□□□ 1.21
SEMA3B-209ENST00000456560 RNMTO43148 476 aaKnown RBP22.58■■□□□ 1.2
SEMA3B-209ENST00000456560 TEFQ10587 303 aa22.58■■□□□ 1.2
SEMA3B-209ENST00000456560 OVOS2A0A0G2JMS6 1433 aa22.57■■□□□ 1.2
SEMA3B-209ENST00000456560 PXDNQ92626 1479 aa22.57■■□□□ 1.2
SEMA3B-209ENST00000456560 BTBD11A6QL63 1104 aa22.57■■□□□ 1.2
SEMA3B-209ENST00000456560 MPRIPQ6WCQ1 1025 aa22.57■■□□□ 1.2
SEMA3B-209ENST00000456560 FOXD4L1Q9NU39 408 aa22.57■■□□□ 1.2
SEMA3B-209ENST00000456560 CHPF2Q9P2E5 772 aa22.57■■□□□ 1.2
SEMA3B-209ENST00000456560 ANKRD24Q8TF21 1146 aa22.57■■□□□ 1.2
SEMA3B-209ENST00000456560 POLA2Q14181 598 aa22.56■■□□□ 1.2
SEMA3B-209ENST00000456560 ATF3P18847 181 aa22.55■■□□□ 1.2
SEMA3B-209ENST00000456560 BEND3Q5T5X7 828 aa22.55■■□□□ 1.2
SEMA3B-209ENST00000456560 MST1RQ04912 1400 aa22.55■■□□□ 1.2
SEMA3B-209ENST00000456560 FSD2A1L4K1 749 aa22.55■■□□□ 1.2
SEMA3B-209ENST00000456560 TSHZ3Q63HK5 1081 aa22.55■■□□□ 1.2
SEMA3B-209ENST00000456560 KRT28Q7Z3Y7 464 aa22.55■■□□□ 1.2
SEMA3B-209ENST00000456560 GBP4Q96PP9 640 aa22.55■■□□□ 1.2
SEMA3B-209ENST00000456560 DNAAF4Q8WXU2 420 aa22.54■■□□□ 1.2
SEMA3B-209ENST00000456560 AOX1Q06278 1338 aa22.54■■□□□ 1.2
SEMA3B-209ENST00000456560 PPP1R42Q7Z4L9 355 aa22.54■■□□□ 1.2
SEMA3B-209ENST00000456560 HEG1Q9ULI3 1381 aa22.53■■□□□ 1.2
SEMA3B-209ENST00000456560 C1orf167Q5SNV9 1468 aa22.53■■□□□ 1.2
SEMA3B-209ENST00000456560 RAB11FIP3O75154 756 aa22.53■■□□□ 1.2
SEMA3B-209ENST00000456560 C1orf141Q5JVX7 400 aa22.53■■□□□ 1.2
SEMA3B-209ENST00000456560 CLEC17AQ6ZS10 378 aa22.53■■□□□ 1.2
SEMA3B-209ENST00000456560 AXIN2Q9Y2T1 843 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms