RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 RSPH6AQ9H0K4 717 aa24.09■■□□□ 1.45
PDLIM2-215ENST00000456545 PAPPAQ13219 1627 aa24.09■■□□□ 1.45
PDLIM2-215ENST00000456545 GNAT3A8MTJ3 354 aa24.08■■□□□ 1.45
PDLIM2-215ENST00000456545 AK7Q96M32 723 aa24.08■■□□□ 1.45
PDLIM2-215ENST00000456545 ZNF316A6NFI3 1004 aaPredicted RBP24.07■■□□□ 1.44
PDLIM2-215ENST00000456545 MTFR1LQ9H019 292 aa24.07■■□□□ 1.44
PDLIM2-215ENST00000456545 PHACTR3Q96KR7 559 aa24.06■■□□□ 1.44
PDLIM2-215ENST00000456545 SLC52A2Q9HAB3 445 aa24.06■■□□□ 1.44
PDLIM2-215ENST00000456545 PTCD1O75127 700 aaKnown RBP24.05■■□□□ 1.44
PDLIM2-215ENST00000456545 PNNQ9H307 717 aaKnown RBP24.05■■□□□ 1.44
PDLIM2-215ENST00000456545 SCN11AQ9UI33 1791 aa24.05■■□□□ 1.44
PDLIM2-215ENST00000456545 MYBBP1AQ9BQG0 1328 aaKnown RBP24.05■■□□□ 1.44
PDLIM2-215ENST00000456545 TEFQ10587 303 aa24.04■■□□□ 1.44
PDLIM2-215ENST00000456545 FLAD1Q8NFF5 587 aa24.04■■□□□ 1.44
PDLIM2-215ENST00000456545 SLC16A10Q8TF71 515 aa24.04■■□□□ 1.44
PDLIM2-215ENST00000456545 PNPLA7Q6ZV29 1317 aa24.04■■□□□ 1.44
PDLIM2-215ENST00000456545 MAP3K5Q99683 1374 aa24.03■■□□□ 1.44
PDLIM2-215ENST00000456545 CASZ1Q86V15 1759 aa24.03■■□□□ 1.44
PDLIM2-215ENST00000456545 C5P01031 1676 aa24.03■■□□□ 1.44
PDLIM2-215ENST00000456545 RTF1Q92541 710 aaKnown RBP24.03■■□□□ 1.44
PDLIM2-215ENST00000456545 ITPK1Q13572 414 aa24.01■■□□□ 1.43
PDLIM2-215ENST00000456545 LINC00116Q8NCU8 138 aa24.01■■□□□ 1.43
PDLIM2-215ENST00000456545 TAF1LQ8IZX4 1826 aa24■■□□□ 1.43
PDLIM2-215ENST00000456545 COL23A1Q86Y22 540 aaPredicted RBP24■■□□□ 1.43
PDLIM2-215ENST00000456545 PHF14O94880 888 aa23.99■■□□□ 1.43
PDLIM2-215ENST00000456545 VIRMAQ69YN4 1812 aaKnown RBP23.98■■□□□ 1.43
PDLIM2-215ENST00000456545 GNPATO15228 680 aa23.98■■□□□ 1.43
PDLIM2-215ENST00000456545 POLD1P28340 1107 aa23.98■■□□□ 1.43
PDLIM2-215ENST00000456545 SLC39A6Q13433 755 aa23.98■■□□□ 1.43
PDLIM2-215ENST00000456545 TTC5Q8N0Z6 440 aa23.98■■□□□ 1.43
PDLIM2-215ENST00000456545 IL17REQ8NFR9 667 aa23.98■■□□□ 1.43
PDLIM2-215ENST00000456545 PRKRIP1Q9H875 184 aaPredicted RBP23.98■■□□□ 1.43
PDLIM2-215ENST00000456545 C4BP0C0L5 1744 aa23.98■■□□□ 1.43
PDLIM2-215ENST00000456545 QSER1Q2KHR3 1735 aa23.98■■□□□ 1.43
PDLIM2-215ENST00000456545 MAPK8IP3Q9UPT6 1336 aa23.97■■□□□ 1.43
PDLIM2-215ENST00000456545 PTGER2P43116 358 aa23.96■■□□□ 1.43
PDLIM2-215ENST00000456545 SLC4A9Q96Q91 983 aa23.96■■□□□ 1.43
PDLIM2-215ENST00000456545 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.95■■□□□ 1.42
PDLIM2-215ENST00000456545 WDR43Q15061 677 aaKnown RBP eCLIP23.95■■□□□ 1.42
PDLIM2-215ENST00000456545 RTCBQ9Y3I0 505 aaKnown RBP23.95■■□□□ 1.42
PDLIM2-215ENST00000456545 TUBGCP6Q96RT7 1819 aa23.95■■□□□ 1.42
PDLIM2-215ENST00000456545 SSFA2P28290 1259 aa23.94■■□□□ 1.42
PDLIM2-215ENST00000456545 RC3H1Q5TC82 1133 aaKnown RBP23.93■■□□□ 1.42
PDLIM2-215ENST00000456545 ARXQ96QS3 562 aa23.93■■□□□ 1.42
PDLIM2-215ENST00000456545 HTATSF1O43719 755 aaKnown RBP23.92■■□□□ 1.42
PDLIM2-215ENST00000456545 TRAPPC3LQ5T215 181 aa23.92■■□□□ 1.42
PDLIM2-215ENST00000456545 SMIM5Q71RC9 77 aa23.92■■□□□ 1.42
PDLIM2-215ENST00000456545 MCM10Q7L590 875 aa23.92■■□□□ 1.42
PDLIM2-215ENST00000456545 SRCAPQ6ZRS2 3230 aa23.92■■□□□ 1.42
PDLIM2-215ENST00000456545 DCAF8L1A6NGE4 600 aa23.91■■□□□ 1.42
PDLIM2-215ENST00000456545 BTBD11A6QL63 1104 aa23.91■■□□□ 1.42
PDLIM2-215ENST00000456545 MSL1Q68DK7 614 aa23.91■■□□□ 1.42
PDLIM2-215ENST00000456545 MRC1P22897 1456 aa23.91■■□□□ 1.42
PDLIM2-215ENST00000456545 KLHL34Q8N239 644 aa23.9■■□□□ 1.42
PDLIM2-215ENST00000456545 PLEKHF1Q96S99 279 aa23.9■■□□□ 1.42
PDLIM2-215ENST00000456545 ADAMTS7Q9UKP4 1686 aa23.89■■□□□ 1.42
PDLIM2-215ENST00000456545 CNTNAP4Q9C0A0 1308 aa23.89■■□□□ 1.42
PDLIM2-215ENST00000456545 CRKLP46109 303 aaKnown RBP23.89■■□□□ 1.41
PDLIM2-215ENST00000456545 DCTN1Q14203 1278 aa23.89■■□□□ 1.41
PDLIM2-215ENST00000456545 NFE2L2Q16236 605 aa23.89■■□□□ 1.41
PDLIM2-215ENST00000456545 DNAJC10Q8IXB1 793 aa23.89■■□□□ 1.41
PDLIM2-215ENST00000456545 SGIP1Q9BQI5 828 aa23.89■■□□□ 1.41
PDLIM2-215ENST00000456545 ZNF831Q5JPB2 1677 aa23.89■■□□□ 1.41
PDLIM2-215ENST00000456545 RPS6KA4O75676 772 aa23.88■■□□□ 1.41
PDLIM2-215ENST00000456545 ZNF790Q6PG37 636 aa23.88■■□□□ 1.41
PDLIM2-215ENST00000456545 RFC4P35249 363 aa23.87■■□□□ 1.41
PDLIM2-215ENST00000456545 AMIGO3Q86WK7 504 aa23.87■■□□□ 1.41
PDLIM2-215ENST00000456545 VSIG10Q8N0Z9 540 aa23.87■■□□□ 1.41
PDLIM2-215ENST00000456545 FHDC1Q9C0D6 1143 aaPredicted RBP23.87■■□□□ 1.41
PDLIM2-215ENST00000456545 UBR3Q6ZT12 1888 aa23.87■■□□□ 1.41
PDLIM2-215ENST00000456545 CEMIPQ8WUJ3 1361 aa23.87■■□□□ 1.41
PDLIM2-215ENST00000456545 ANP32CO43423 234 aa23.86■■□□□ 1.41
PDLIM2-215ENST00000456545 ADRA2BP18089 450 aa23.85■■□□□ 1.41
PDLIM2-215ENST00000456545 FMNL2Q96PY5 1086 aa23.85■■□□□ 1.41
PDLIM2-215ENST00000456545 STARD3NLO95772 234 aa23.84■■□□□ 1.41
PDLIM2-215ENST00000456545 TAF7Q15545 349 aaPredicted RBP23.84■■□□□ 1.41
PDLIM2-215ENST00000456545 CCDC146Q8IYE0 955 aa23.84■■□□□ 1.41
PDLIM2-215ENST00000456545 ARHGEF1Q92888 912 aaKnown RBP23.84■■□□□ 1.41
PDLIM2-215ENST00000456545 TEX13AQ9BXU3 409 aaPredicted RBP23.84■■□□□ 1.41
PDLIM2-215ENST00000456545 CCDC87Q9NVE4 849 aa23.84■■□□□ 1.41
PDLIM2-215ENST00000456545 RIPK4P57078 832 aa23.83■■□□□ 1.41
PDLIM2-215ENST00000456545 ZNF496Q96IT1 587 aaPredicted RBP23.83■■□□□ 1.41
PDLIM2-215ENST00000456545 SYT17Q9BSW7 474 aa23.83■■□□□ 1.41
PDLIM2-215ENST00000456545 COL5A3P25940 1745 aaPredicted RBP23.83■■□□□ 1.41
PDLIM2-215ENST00000456545 CYP19A1P11511 503 aaPredicted RBP23.82■■□□□ 1.4
PDLIM2-215ENST00000456545 ADAMTS8Q9UP79 889 aa23.82■■□□□ 1.4
PDLIM2-215ENST00000456545 INTS5Q6P9B9 1019 aaKnown RBP23.81■■□□□ 1.4
PDLIM2-215ENST00000456545 RUNDC1Q96C34 613 aa23.81■■□□□ 1.4
PDLIM2-215ENST00000456545 HEG1Q9ULI3 1381 aa23.8■■□□□ 1.4
PDLIM2-215ENST00000456545 KCPQ6ZWJ8 1503 aa23.8■■□□□ 1.4
PDLIM2-215ENST00000456545 KCNQ3O43525 872 aa23.8■■□□□ 1.4
PDLIM2-215ENST00000456545 TJP1Q07157 1748 aa23.8■■□□□ 1.4
PDLIM2-215ENST00000456545 NEUROD2Q15784 382 aa23.8■■□□□ 1.4
PDLIM2-215ENST00000456545 PNISRQ8TF01 805 aaKnown RBP23.8■■□□□ 1.4
PDLIM2-215ENST00000456545 DLG5Q8TDM6 1919 aa23.8■■□□□ 1.4
PDLIM2-215ENST00000456545 SIPA1L3O60292 1781 aaPredicted RBP23.8■■□□□ 1.4
PDLIM2-215ENST00000456545 CANXP27824 592 aaKnown RBP23.79■■□□□ 1.4
PDLIM2-215ENST00000456545 TMPOP42166 694 aaKnown RBP23.79■■□□□ 1.4
PDLIM2-215ENST00000456545 LMOD3Q0VAK6 560 aa23.79■■□□□ 1.4
PDLIM2-215ENST00000456545 NPM2Q86SE8 214 aaKnown RBP23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms