RNA–Protein interactions for RNA: ENST00000456542.5

SP140-207, Transcript of SP140 nuclear body protein, humanhuman

TSL 4

Gene SP140, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-207ENST00000456542 ANO8Q9HCE9 1232 aaPredicted RBP11.31□□□□□ -0.6
SP140-207ENST00000456542 LRRC4BQ9NT99 713 aa11.31□□□□□ -0.6
SP140-207ENST00000456542 CCNL1Q9UK58 526 aaPredicted RBP11.31□□□□□ -0.6
SP140-207ENST00000456542 CICQ96RK0 1608 aaPredicted RBP11.31□□□□□ -0.6
SP140-207ENST00000456542 PLEKHF1Q96S99 279 aa11.3□□□□□ -0.6
SP140-207ENST00000456542 SLC52A2Q9HAB3 445 aa11.3□□□□□ -0.6
SP140-207ENST00000456542 STK32BQ9NY57 414 aa11.3□□□□□ -0.6
SP140-207ENST00000456542 CASZ1Q86V15 1759 aa11.3□□□□□ -0.6
SP140-207ENST00000456542 TUBGCP6Q96RT7 1819 aa11.3□□□□□ -0.6
SP140-207ENST00000456542 CEMIPQ8WUJ3 1361 aa11.29□□□□□ -0.6
SP140-207ENST00000456542 LRP5O75197 1615 aa11.29□□□□□ -0.6
SP140-207ENST00000456542 PSDA5PKW4 1024 aaPredicted RBP11.29□□□□□ -0.6
SP140-207ENST00000456542 ANP32CO43423 234 aa11.29□□□□□ -0.6
SP140-207ENST00000456542 SLC15A2Q16348 729 aa11.29□□□□□ -0.6
SP140-207ENST00000456542 NFATC2IPQ8NCF5 419 aa11.29□□□□□ -0.6
SP140-207ENST00000456542 LGR6Q9HBX8 967 aa11.29□□□□□ -0.6
SP140-207ENST00000456542 ATG3Q9NT62 314 aa11.29□□□□□ -0.6
SP140-207ENST00000456542 ASAP1Q9ULH1 1129 aa11.29□□□□□ -0.6
SP140-207ENST00000456542 UBR2Q8IWV8 1755 aa11.28□□□□□ -0.6
SP140-207ENST00000456542 LOC102724428A0A0B4J2F2 783 aa11.28□□□□□ -0.6
SP140-207ENST00000456542 HTATSF1O43719 755 aaKnown RBP11.28□□□□□ -0.6
SP140-207ENST00000456542 SIK1P57059 783 aa11.28□□□□□ -0.6
SP140-207ENST00000456542 WDR43Q15061 677 aaKnown RBP eCLIP11.28□□□□□ -0.6
SP140-207ENST00000456542 AKT1S1Q96B36 256 aa11.28□□□□□ -0.6
SP140-207ENST00000456542 C4BP0C0L5 1744 aa11.28□□□□□ -0.6
SP140-207ENST00000456542 COL5A3P25940 1745 aaPredicted RBP11.28□□□□□ -0.6
SP140-207ENST00000456542 MAPK8IP3Q9UPT6 1336 aa11.28□□□□□ -0.6
SP140-207ENST00000456542 IL17REQ8NFR9 667 aa11.27□□□□□ -0.61
SP140-207ENST00000456542 UBR3Q6ZT12 1888 aa11.27□□□□□ -0.61
SP140-207ENST00000456542 KCNQ4P56696 695 aa11.26□□□□□ -0.61
SP140-207ENST00000456542 TEFQ10587 303 aa11.26□□□□□ -0.61
SP140-207ENST00000456542 ZNF827Q17R98 1081 aa11.26□□□□□ -0.61
SP140-207ENST00000456542 RTF1Q92541 710 aaKnown RBP11.26□□□□□ -0.61
SP140-207ENST00000456542 TJP1Q07157 1748 aa11.26□□□□□ -0.61
SP140-207ENST00000456542 ATP6V1AP38606 617 aa11.25□□□□□ -0.61
SP140-207ENST00000456542 NFE2L2Q16236 605 aa11.25□□□□□ -0.61
SP140-207ENST00000456542 KCPQ6ZWJ8 1503 aa11.25□□□□□ -0.61
SP140-207ENST00000456542 RBM42Q9BTD8 480 aaKnown RBP11.24□□□□□ -0.61
SP140-207ENST00000456542 ADAMTS8Q9UP79 889 aa11.24□□□□□ -0.61
SP140-207ENST00000456542 MYH14Q7Z406 1995 aaKnown RBP11.23□□□□□ -0.61
SP140-207ENST00000456542 ITPK1Q13572 414 aa11.23□□□□□ -0.61
SP140-207ENST00000456542 RUNDC1Q96C34 613 aa11.23□□□□□ -0.61
SP140-207ENST00000456542 SLC4A9Q96Q91 983 aa11.23□□□□□ -0.61
SP140-207ENST00000456542 TFCP2L1Q9NZI6 479 aa11.23□□□□□ -0.61
SP140-207ENST00000456542 PNPLA7Q6ZV29 1317 aa11.23□□□□□ -0.61
SP140-207ENST00000456542 COL24A1Q17RW2 1714 aa11.23□□□□□ -0.61
SP140-207ENST00000456542 PTCD1O75127 700 aaKnown RBP11.22□□□□□ -0.61
SP140-207ENST00000456542 SLC39A6Q13433 755 aa11.22□□□□□ -0.61
SP140-207ENST00000456542 CCDC184Q52MB2 194 aa11.22□□□□□ -0.61
SP140-207ENST00000456542 ZNF790Q6PG37 636 aa11.22□□□□□ -0.61
SP140-207ENST00000456542 MCM10Q7L590 875 aa11.22□□□□□ -0.61
SP140-207ENST00000456542 KDM3BQ7LBC6 1761 aa11.22□□□□□ -0.61
SP140-207ENST00000456542 TTC5Q8N0Z6 440 aa11.22□□□□□ -0.61
SP140-207ENST00000456542 VSIG10Q8N0Z9 540 aa11.22□□□□□ -0.61
SP140-207ENST00000456542 LINC00116Q8NCU8 138 aa11.22□□□□□ -0.61
SP140-207ENST00000456542 FLAD1Q8NFF5 587 aa11.22□□□□□ -0.61
SP140-207ENST00000456542 SLC16A10Q8TF71 515 aa11.22□□□□□ -0.61
SP140-207ENST00000456542 AK7Q96M32 723 aa11.22□□□□□ -0.61
SP140-207ENST00000456542 CNTNAP4Q9C0A0 1308 aa11.21□□□□□ -0.61
SP140-207ENST00000456542 HOXD11P31277 338 aaPredicted RBP11.21□□□□□ -0.61
SP140-207ENST00000456542 TMPOP42166 694 aaKnown RBP11.21□□□□□ -0.61
SP140-207ENST00000456542 LMOD3Q0VAK6 560 aa11.21□□□□□ -0.61
SP140-207ENST00000456542 DCTN1Q14203 1278 aa11.21□□□□□ -0.61
SP140-207ENST00000456542 RC3H1Q5TC82 1133 aaKnown RBP11.21□□□□□ -0.61
SP140-207ENST00000456542 SPON1Q9HCB6 807 aa11.21□□□□□ -0.61
SP140-207ENST00000456542 MRS2Q9HD23 443 aa11.21□□□□□ -0.61
SP140-207ENST00000456542 BTBD11A6QL63 1104 aa11.2□□□□□ -0.62
SP140-207ENST00000456542 SSFA2P28290 1259 aa11.2□□□□□ -0.62
SP140-207ENST00000456542 RIPK4P57078 832 aa11.2□□□□□ -0.62
SP140-207ENST00000456542 CCDC146Q8IYE0 955 aa11.2□□□□□ -0.62
SP140-207ENST00000456542 PNISRQ8TF01 805 aaKnown RBP11.2□□□□□ -0.62
SP140-207ENST00000456542 PDGFDQ9GZP0 370 aaPredicted RBP11.2□□□□□ -0.62
SP140-207ENST00000456542 MTFR1LQ9H019 292 aa11.2□□□□□ -0.62
SP140-207ENST00000456542 HEG1Q9ULI3 1381 aa11.19□□□□□ -0.62
SP140-207ENST00000456542 DCAF8L1A6NGE4 600 aa11.19□□□□□ -0.62
SP140-207ENST00000456542 TAF7Q15545 349 aaPredicted RBP11.19□□□□□ -0.62
SP140-207ENST00000456542 ZNF496Q96IT1 587 aaPredicted RBP11.19□□□□□ -0.62
SP140-207ENST00000456542 C4AP0C0L4 1744 aa11.18□□□□□ -0.62
SP140-207ENST00000456542 GNPATO15228 680 aa11.18□□□□□ -0.62
SP140-207ENST00000456542 CRKLP46109 303 aaKnown RBP11.18□□□□□ -0.62
SP140-207ENST00000456542 COL23A1Q86Y22 540 aaPredicted RBP11.18□□□□□ -0.62
SP140-207ENST00000456542 DNAJC10Q8IXB1 793 aa11.18□□□□□ -0.62
SP140-207ENST00000456542 FMNL2Q96PY5 1086 aa11.18□□□□□ -0.62
SP140-207ENST00000456542 LAMB4A4D0S4 1761 aa11.18□□□□□ -0.62
SP140-207ENST00000456542 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.17□□□□□ -0.62
SP140-207ENST00000456542 RPS6KA4O75676 772 aa11.17□□□□□ -0.62
SP140-207ENST00000456542 ZBTB7AO95365 584 aa11.17□□□□□ -0.62
SP140-207ENST00000456542 CYP19A1P11511 503 aaPredicted RBP11.17□□□□□ -0.62
SP140-207ENST00000456542 SGIP1Q9BQI5 828 aa11.17□□□□□ -0.62
SP140-207ENST00000456542 TEX13AQ9BXU3 409 aaPredicted RBP11.17□□□□□ -0.62
SP140-207ENST00000456542 RRP7AQ9Y3A4 280 aaKnown RBP11.17□□□□□ -0.62
SP140-207ENST00000456542 RTCBQ9Y3I0 505 aaKnown RBP11.17□□□□□ -0.62
SP140-207ENST00000456542 APAF1O14727 1248 aa11.16□□□□□ -0.62
SP140-207ENST00000456542 KCNQ3O43525 872 aa11.16□□□□□ -0.62
SP140-207ENST00000456542 PTGER2P43116 358 aa11.16□□□□□ -0.62
SP140-207ENST00000456542 NEUROD2Q15784 382 aa11.16□□□□□ -0.62
SP140-207ENST00000456542 AMIGO3Q86WK7 504 aa11.16□□□□□ -0.62
SP140-207ENST00000456542 THUMPD2Q9BTF0 503 aaKnown RBP11.16□□□□□ -0.62
SP140-207ENST00000456542 CCDC87Q9NVE4 849 aa11.16□□□□□ -0.62
SP140-207ENST00000456542 BABAM1Q9NWV8 329 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms