RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 FAM208AQ9UK61 1670 aaKnown RBP21.63■■□□□ 1.05
PTPN6-204ENST00000456013 ESYT1Q9BSJ8 1104 aa21.62■■□□□ 1.05
PTPN6-204ENST00000456013 EXOC6BQ9Y2D4 811 aa21.62■■□□□ 1.05
PTPN6-204ENST00000456013 N4BP2Q86UW6 1770 aaPredicted RBP21.61■■□□□ 1.05
PTPN6-204ENST00000456013 NEK4P51957 841 aa21.61■■□□□ 1.05
PTPN6-204ENST00000456013 STK31Q9BXU1 1019 aa21.61■■□□□ 1.05
PTPN6-204ENST00000456013 LRRCC1Q9C099 1032 aa21.61■■□□□ 1.05
PTPN6-204ENST00000456013 RBSNQ9H1K0 784 aa21.61■■□□□ 1.05
PTPN6-204ENST00000456013 LRRC37A3O60309 1634 aa21.61■■□□□ 1.05
PTPN6-204ENST00000456013 SBNO1A3KN83 1393 aa21.61■■□□□ 1.05
PTPN6-204ENST00000456013 FLT4P35916 1363 aa21.61■■□□□ 1.05
PTPN6-204ENST00000456013 TTC21AQ8NDW8 1320 aa21.61■■□□□ 1.05
PTPN6-204ENST00000456013 HS1BP3Q53T59 392 aa21.61■■□□□ 1.05
PTPN6-204ENST00000456013 TMX3Q96JJ7 454 aa21.61■■□□□ 1.05
PTPN6-204ENST00000456013 GNAI3P08754 354 aa21.6■■□□□ 1.05
PTPN6-204ENST00000456013 NUTM2FA1L443 756 aa21.6■■□□□ 1.05
PTPN6-204ENST00000456013 MX1P20591 662 aa21.59■■□□□ 1.05
PTPN6-204ENST00000456013 PRIM1P49642 420 aaKnown RBP21.59■■□□□ 1.05
PTPN6-204ENST00000456013 ANAPC15P60006 121 aa21.59■■□□□ 1.05
PTPN6-204ENST00000456013 CUL4AQ13619 759 aa21.59■■□□□ 1.05
PTPN6-204ENST00000456013 SOX12O15370 315 aa21.59■■□□□ 1.05
PTPN6-204ENST00000456013 MCCP23508 829 aa21.59■■□□□ 1.05
PTPN6-204ENST00000456013 ATP8B2P98198 1209 aa21.59■■□□□ 1.05
PTPN6-204ENST00000456013 PDLIM2Q96JY6 352 aa21.59■■□□□ 1.05
PTPN6-204ENST00000456013 IGSF1Q8N6C5 1336 aa21.58■■□□□ 1.05
PTPN6-204ENST00000456013 HTATSF1O43719 755 aaKnown RBP21.58■■□□□ 1.05
PTPN6-204ENST00000456013 CEP170BQ9Y4F5 1589 aaPredicted RBP21.58■■□□□ 1.04
PTPN6-204ENST00000456013 MSNP26038 577 aaKnown RBP21.58■■□□□ 1.04
PTPN6-204ENST00000456013 FLIIQ13045 1269 aa21.58■■□□□ 1.04
PTPN6-204ENST00000456013 RBM27Q9P2N5 1060 aaKnown RBP21.58■■□□□ 1.04
PTPN6-204ENST00000456013 RRP9O43818 475 aaKnown RBP21.57■■□□□ 1.04
PTPN6-204ENST00000456013 TPM2P07951 284 aa21.57■■□□□ 1.04
PTPN6-204ENST00000456013 CCDC30Q5VVM6 783 aa21.57■■□□□ 1.04
PTPN6-204ENST00000456013 IL17RAQ96F46 866 aa21.57■■□□□ 1.04
PTPN6-204ENST00000456013 STAP2Q9UGK3 403 aa21.57■■□□□ 1.04
PTPN6-204ENST00000456013 PLEKHG1Q9ULL1 1385 aa21.57■■□□□ 1.04
PTPN6-204ENST00000456013 CHMLP26374 656 aa21.56■■□□□ 1.04
PTPN6-204ENST00000456013 TSHZ3Q63HK5 1081 aa21.56■■□□□ 1.04
PTPN6-204ENST00000456013 LRSAM1Q6UWE0 723 aa21.56■■□□□ 1.04
PTPN6-204ENST00000456013 EYA1Q99502 592 aa21.56■■□□□ 1.04
PTPN6-204ENST00000456013 SRCIN1Q9C0H9 1055 aa21.56■■□□□ 1.04
PTPN6-204ENST00000456013 TMEM63CQ9P1W3 806 aa21.56■■□□□ 1.04
PTPN6-204ENST00000456013 PNMA6EA0A0J9YXQ4 647 aa21.56■■□□□ 1.04
PTPN6-204ENST00000456013 BRD1O95696 1058 aa21.56■■□□□ 1.04
PTPN6-204ENST00000456013 INTS4Q96HW7 963 aaKnown RBP21.56■■□□□ 1.04
PTPN6-204ENST00000456013 MBD3O95983 291 aa21.55■■□□□ 1.04
PTPN6-204ENST00000456013 FKBP5Q13451 457 aaPredicted RBP21.55■■□□□ 1.04
PTPN6-204ENST00000456013 OFD1O75665 1012 aa21.54■■□□□ 1.04
PTPN6-204ENST00000456013 HSP90AA2PQ14568 343 aaPredicted RBP21.54■■□□□ 1.04
PTPN6-204ENST00000456013 PALD1Q9ULE6 856 aa21.54■■□□□ 1.04
PTPN6-204ENST00000456013 SOS1Q07889 1333 aaPredicted RBP21.54■■□□□ 1.04
PTPN6-204ENST00000456013 PXDNLA1KZ92 1463 aa21.54■■□□□ 1.04
PTPN6-204ENST00000456013 PTPRUQ92729 1446 aa21.53■■□□□ 1.04
PTPN6-204ENST00000456013 RILPL2Q969X0 211 aa21.53■■□□□ 1.04
PTPN6-204ENST00000456013 CHAMP1Q96JM3 812 aa21.53■■□□□ 1.04
PTPN6-204ENST00000456013 AOX1Q06278 1338 aa21.53■■□□□ 1.04
PTPN6-204ENST00000456013 TRIM6-TRIM34B2RNG4 842 aa21.53■■□□□ 1.04
PTPN6-204ENST00000456013 ANO2Q9NQ90 1003 aa21.53■■□□□ 1.04
PTPN6-204ENST00000456013 NOL7Q9UMY1 257 aaKnown RBP21.53■■□□□ 1.04
PTPN6-204ENST00000456013 NSFL1CQ9UNZ2 370 aaKnown RBP21.53■■□□□ 1.04
PTPN6-204ENST00000456013 EPB41L2O43491 1005 aaKnown RBP21.52■■□□□ 1.04
PTPN6-204ENST00000456013 AMPHP49418 695 aa21.52■■□□□ 1.04
PTPN6-204ENST00000456013 RGPD8O14715 1765 aaPredicted RBP21.52■■□□□ 1.04
PTPN6-204ENST00000456013 PIK3C2AO00443 1686 aa21.51■■□□□ 1.03
PTPN6-204ENST00000456013 GNAT3A8MTJ3 354 aa21.51■■□□□ 1.03
PTPN6-204ENST00000456013 LTKP29376 864 aa21.51■■□□□ 1.03
PTPN6-204ENST00000456013 KIAA1211Q6ZU35 1233 aa21.51■■□□□ 1.03
PTPN6-204ENST00000456013 SYCE3A1L190 88 aa21.51■■□□□ 1.03
PTPN6-204ENST00000456013 FOXD4L5Q5VV16 416 aaPredicted RBP21.51■■□□□ 1.03
PTPN6-204ENST00000456013 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.51■■□□□ 1.03
PTPN6-204ENST00000456013 FOXD4L4Q8WXT5 416 aaPredicted RBP21.51■■□□□ 1.03
PTPN6-204ENST00000456013 LRRFIP2Q9Y608 721 aaKnown RBP21.51■■□□□ 1.03
PTPN6-204ENST00000456013 BABAM1Q9NWV8 329 aa21.49■■□□□ 1.03
PTPN6-204ENST00000456013 ZNF500O60304 480 aaPredicted RBP21.48■■□□□ 1.03
PTPN6-204ENST00000456013 UNC5CLQ8IV45 518 aa21.48■■□□□ 1.03
PTPN6-204ENST00000456013 TERF1P54274 439 aa21.48■■□□□ 1.03
PTPN6-204ENST00000456013 USP44Q9H0E7 712 aa21.48■■□□□ 1.03
PTPN6-204ENST00000456013 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.47■■□□□ 1.03
PTPN6-204ENST00000456013 SSH3Q8TE77 659 aa21.47■■□□□ 1.03
PTPN6-204ENST00000456013 NECTIN2Q92692 538 aa21.47■■□□□ 1.03
PTPN6-204ENST00000456013 NWD1Q149M9 1564 aa21.46■■□□□ 1.03
PTPN6-204ENST00000456013 UBTFL1P0CB47 393 aaPredicted RBP21.46■■□□□ 1.03
PTPN6-204ENST00000456013 GLIPR1L2Q4G1C9 344 aa21.46■■□□□ 1.03
PTPN6-204ENST00000456013 NGDNQ8NEJ9 315 aaKnown RBP21.46■■□□□ 1.03
PTPN6-204ENST00000456013 MAP3K5Q99683 1374 aa21.46■■□□□ 1.03
PTPN6-204ENST00000456013 DIP2AQ14689 1571 aa21.46■■□□□ 1.03
PTPN6-204ENST00000456013 HSPA4P34932 840 aa21.45■■□□□ 1.02
PTPN6-204ENST00000456013 TAF7Q15545 349 aaPredicted RBP21.45■■□□□ 1.02
PTPN6-204ENST00000456013 IL17REQ8NFR9 667 aa21.45■■□□□ 1.02
PTPN6-204ENST00000456013 RAB11FIP3O75154 756 aa21.45■■□□□ 1.02
PTPN6-204ENST00000456013 MCM5P33992 734 aa21.45■■□□□ 1.02
PTPN6-204ENST00000456013 NOL8Q76FK4 1167 aaKnown RBP21.45■■□□□ 1.02
PTPN6-204ENST00000456013 SLC26A8Q96RN1 970 aa21.45■■□□□ 1.02
PTPN6-204ENST00000456013 MARF1Q9Y4F3 1742 aaKnown RBP21.45■■□□□ 1.02
PTPN6-204ENST00000456013 SYAP1Q96A49 352 aaPredicted RBP21.44■■□□□ 1.02
PTPN6-204ENST00000456013 UPF3BQ9BZI7 483 aaKnown RBP21.44■■□□□ 1.02
PTPN6-204ENST00000456013 AMOTL2Q9Y2J4 779 aa21.44■■□□□ 1.02
PTPN6-204ENST00000456013 ZKSCAN5Q9Y2L8 839 aa21.44■■□□□ 1.02
PTPN6-204ENST00000456013 PLEKHG5O94827 1062 aa21.44■■□□□ 1.02
PTPN6-204ENST00000456013 TCHHQ07283 1943 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 164.2 ms