RNA–Protein interactions for RNA: ENST00000455496.1

NIPSNAP1-204, Transcript of nipsnap homolog 1, humanhuman

TSL 3

Gene NIPSNAP1, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP1-204ENST00000455496 RAB3GAP2Q9H2M9 1393 aa13.77□□□□□ -0.21
NIPSNAP1-204ENST00000455496 CENPJQ9HC77 1338 aaPredicted RBP13.77□□□□□ -0.21
NIPSNAP1-204ENST00000455496 TOGARAM1Q9Y4F4 1720 aa13.76□□□□□ -0.21
NIPSNAP1-204ENST00000455496 RASSF7Q02833 373 aa13.76□□□□□ -0.21
NIPSNAP1-204ENST00000455496 TRAPPC3LQ5T215 181 aa13.76□□□□□ -0.21
NIPSNAP1-204ENST00000455496 LINC00116Q8NCU8 138 aa13.76□□□□□ -0.21
NIPSNAP1-204ENST00000455496 KDM6AO15550 1401 aaPredicted RBP13.75□□□□□ -0.21
NIPSNAP1-204ENST00000455496 DEFB115Q30KQ5 88 aa13.75□□□□□ -0.21
NIPSNAP1-204ENST00000455496 IP6K1Q92551 441 aa13.75□□□□□ -0.21
NIPSNAP1-204ENST00000455496 SBF1O95248 1867 aa13.74□□□□□ -0.21
NIPSNAP1-204ENST00000455496 BRCA1P38398 1863 aaKnown RBP13.74□□□□□ -0.21
NIPSNAP1-204ENST00000455496 USP31Q70CQ4 1352 aa13.74□□□□□ -0.21
NIPSNAP1-204ENST00000455496 CGNL1Q0VF96 1302 aa13.74□□□□□ -0.21
NIPSNAP1-204ENST00000455496 PASKQ96RG2 1323 aa13.74□□□□□ -0.21
NIPSNAP1-204ENST00000455496 LOC102724428A0A0B4J2F2 783 aa13.74□□□□□ -0.21
NIPSNAP1-204ENST00000455496 SIK1P57059 783 aa13.74□□□□□ -0.21
NIPSNAP1-204ENST00000455496 MCOLN1Q9GZU1 580 aa13.74□□□□□ -0.21
NIPSNAP1-204ENST00000455496 KTN1Q86UP2 1357 aaKnown RBP13.73□□□□□ -0.21
NIPSNAP1-204ENST00000455496 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.73□□□□□ -0.21
NIPSNAP1-204ENST00000455496 RTCBQ9Y3I0 505 aaKnown RBP13.73□□□□□ -0.21
NIPSNAP1-204ENST00000455496 EVC2Q86UK5 1308 aa13.72□□□□□ -0.21
NIPSNAP1-204ENST00000455496 WDR33Q9C0J8 1336 aaKnown RBP13.72□□□□□ -0.21
NIPSNAP1-204ENST00000455496 RASSF10A6NK89 507 aa13.72□□□□□ -0.21
NIPSNAP1-204ENST00000455496 POTEIP0CG38 1075 aa13.71□□□□□ -0.21
NIPSNAP1-204ENST00000455496 POTEJP0CG39 1038 aa13.71□□□□□ -0.21
NIPSNAP1-204ENST00000455496 GYS1P13807 737 aa13.71□□□□□ -0.21
NIPSNAP1-204ENST00000455496 VIRMAQ69YN4 1812 aaKnown RBP13.7□□□□□ -0.22
NIPSNAP1-204ENST00000455496 ADRA2BP18089 450 aa13.7□□□□□ -0.22
NIPSNAP1-204ENST00000455496 CHRNA5P30532 468 aa13.7□□□□□ -0.22
NIPSNAP1-204ENST00000455496 ATP6V1AP38606 617 aa13.7□□□□□ -0.22
NIPSNAP1-204ENST00000455496 LDHDQ86WU2 507 aa13.7□□□□□ -0.22
NIPSNAP1-204ENST00000455496 RAPGEF4Q8WZA2 1011 aa13.7□□□□□ -0.22
NIPSNAP1-204ENST00000455496 GCC1Q96CN9 775 aa13.7□□□□□ -0.22
NIPSNAP1-204ENST00000455496 MEGF6O75095 1541 aa13.69□□□□□ -0.22
NIPSNAP1-204ENST00000455496 PCDH11XQ9BZA7 1347 aa13.69□□□□□ -0.22
NIPSNAP1-204ENST00000455496 PCDH11YQ9BZA8 1340 aa13.69□□□□□ -0.22
NIPSNAP1-204ENST00000455496 RFC4P35249 363 aa13.69□□□□□ -0.22
NIPSNAP1-204ENST00000455496 PIGBQ92521 554 aa13.69□□□□□ -0.22
NIPSNAP1-204ENST00000455496 ARHGEF1Q92888 912 aaKnown RBP13.69□□□□□ -0.22
NIPSNAP1-204ENST00000455496 PCGF6Q9BYE7 350 aa13.69□□□□□ -0.22
NIPSNAP1-204ENST00000455496 C4AP0C0L4 1744 aa13.68□□□□□ -0.22
NIPSNAP1-204ENST00000455496 ITPK1Q13572 414 aa13.68□□□□□ -0.22
NIPSNAP1-204ENST00000455496 NME9Q86XW9 330 aa13.68□□□□□ -0.22
NIPSNAP1-204ENST00000455496 LTN1O94822 1766 aa13.68□□□□□ -0.22
NIPSNAP1-204ENST00000455496 TATP17735 454 aaPredicted RBP13.67□□□□□ -0.22
NIPSNAP1-204ENST00000455496 FAM208AQ9UK61 1670 aaKnown RBP13.66□□□□□ -0.22
NIPSNAP1-204ENST00000455496 IQCA1LA6NCM1 817 aa13.66□□□□□ -0.22
NIPSNAP1-204ENST00000455496 ITGBL1O95965 494 aaPredicted RBP13.66□□□□□ -0.22
NIPSNAP1-204ENST00000455496 DGKZQ13574 1117 aa13.66□□□□□ -0.22
NIPSNAP1-204ENST00000455496 NBPF1Q3BBV0 1214 aa13.66□□□□□ -0.22
NIPSNAP1-204ENST00000455496 ERFEQ4G0M1 354 aa13.66□□□□□ -0.22
NIPSNAP1-204ENST00000455496 ABT1Q9ULW3 272 aaKnown RBP13.66□□□□□ -0.22
NIPSNAP1-204ENST00000455496 ECE1P42892 770 aa13.65□□□□□ -0.22
NIPSNAP1-204ENST00000455496 CD163L1Q9NR16 1453 aa13.64□□□□□ -0.23
NIPSNAP1-204ENST00000455496 CA12O43570 354 aa13.64□□□□□ -0.23
NIPSNAP1-204ENST00000455496 AMPHP49418 695 aa13.64□□□□□ -0.23
NIPSNAP1-204ENST00000455496 ZNF219Q9P2Y4 722 aaPredicted RBP13.64□□□□□ -0.23
NIPSNAP1-204ENST00000455496 DDNO94850 711 aaPredicted RBP13.63□□□□□ -0.23
NIPSNAP1-204ENST00000455496 HOXC9P31274 260 aa13.63□□□□□ -0.23
NIPSNAP1-204ENST00000455496 RC3H1Q5TC82 1133 aaKnown RBP13.63□□□□□ -0.23
NIPSNAP1-204ENST00000455496 TTLL6Q8N841 843 aa13.63□□□□□ -0.23
NIPSNAP1-204ENST00000455496 GPR101Q96P66 508 aaPredicted RBP13.63□□□□□ -0.23
NIPSNAP1-204ENST00000455496 TSKSQ9UJT2 592 aa13.63□□□□□ -0.23
NIPSNAP1-204ENST00000455496 NFKBIEO00221 500 aa13.62□□□□□ -0.23
NIPSNAP1-204ENST00000455496 CYP27B1O15528 508 aa13.62□□□□□ -0.23
NIPSNAP1-204ENST00000455496 SOX10P56693 466 aa13.62□□□□□ -0.23
NIPSNAP1-204ENST00000455496 NBPF6Q5VWK0 638 aa13.62□□□□□ -0.23
NIPSNAP1-204ENST00000455496 PAXIP1Q6ZW49 1069 aaPredicted RBP13.62□□□□□ -0.23
NIPSNAP1-204ENST00000455496 NBPF4Q96M43 638 aa13.62□□□□□ -0.23
NIPSNAP1-204ENST00000455496 ASAP1Q9ULH1 1129 aa13.62□□□□□ -0.23
NIPSNAP1-204ENST00000455496 CLEC11AQ9Y240 323 aa13.62□□□□□ -0.23
NIPSNAP1-204ENST00000455496 RPS6KA4O75676 772 aa13.61□□□□□ -0.23
NIPSNAP1-204ENST00000455496 CAPNS2Q96L46 248 aa13.61□□□□□ -0.23
NIPSNAP1-204ENST00000455496 TAF1DQ9H5J8 278 aaPredicted RBP13.61□□□□□ -0.23
NIPSNAP1-204ENST00000455496 TMOD3Q9NYL9 352 aa13.61□□□□□ -0.23
NIPSNAP1-204ENST00000455496 MAP3K19Q56UN5 1328 aa13.61□□□□□ -0.23
NIPSNAP1-204ENST00000455496 DDR1Q08345 913 aa13.6□□□□□ -0.23
NIPSNAP1-204ENST00000455496 EAPPQ56P03 285 aaPredicted RBP13.6□□□□□ -0.23
NIPSNAP1-204ENST00000455496 TIAM2Q8IVF5 1701 aa13.6□□□□□ -0.23
NIPSNAP1-204ENST00000455496 USHBP1Q8N6Y0 703 aa13.6□□□□□ -0.23
NIPSNAP1-204ENST00000455496 MAP2K2P36507 400 aa13.59□□□□□ -0.23
NIPSNAP1-204ENST00000455496 GRM1Q13255 1194 aa13.59□□□□□ -0.23
NIPSNAP1-204ENST00000455496 CNTROBQ8N137 903 aa13.59□□□□□ -0.23
NIPSNAP1-204ENST00000455496 MAP2P11137 1827 aaKnown RBP13.59□□□□□ -0.23
NIPSNAP1-204ENST00000455496 SBNO2Q9Y2G9 1366 aa13.58□□□□□ -0.23
NIPSNAP1-204ENST00000455496 SMG6Q86US8 1419 aaKnown RBP13.58□□□□□ -0.24
NIPSNAP1-204ENST00000455496 FKBP8Q14318 412 aa13.58□□□□□ -0.24
NIPSNAP1-204ENST00000455496 NKX1-1Q15270 411 aaPredicted RBP13.58□□□□□ -0.24
NIPSNAP1-204ENST00000455496 HABP4Q5JVS0 413 aaKnown RBP13.58□□□□□ -0.24
NIPSNAP1-204ENST00000455496 NBPF15Q8N660 670 aa13.58□□□□□ -0.24
NIPSNAP1-204ENST00000455496 L3MBTL3Q96JM7 780 aaPredicted RBP13.58□□□□□ -0.24
NIPSNAP1-204ENST00000455496 POLRMTO00411 1230 aaKnown RBP13.57□□□□□ -0.24
NIPSNAP1-204ENST00000455496 CYP4F22Q6NT55 531 aa13.57□□□□□ -0.24
NIPSNAP1-204ENST00000455496 HDGFL2Q7Z4V5 671 aaPredicted RBP13.57□□□□□ -0.24
NIPSNAP1-204ENST00000455496 CNTNAP4Q9C0A0 1308 aa13.57□□□□□ -0.24
NIPSNAP1-204ENST00000455496 PNMA8AQ86V59 439 aaPredicted RBP13.56□□□□□ -0.24
NIPSNAP1-204ENST00000455496 ATG3Q9NT62 314 aa13.56□□□□□ -0.24
NIPSNAP1-204ENST00000455496 DLL1O00548 723 aa13.55□□□□□ -0.24
NIPSNAP1-204ENST00000455496 TM4SF1P30408 202 aa13.55□□□□□ -0.24
NIPSNAP1-204ENST00000455496 DDX21Q9NR30 783 aaKnown RBP eCLIP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms