RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 IDI1Q13907 227 aa7.16□□□□□ -1.26
HMGB1P4-201ENST00000455362 PRR7Q8TB68 274 aa7.16□□□□□ -1.26
HMGB1P4-201ENST00000455362 C8orf37Q96NL8 207 aa7.16□□□□□ -1.26
HMGB1P4-201ENST00000455362 SLC52A1Q9NWF4 448 aa7.16□□□□□ -1.26
HMGB1P4-201ENST00000455362 TSKSQ9UJT2 592 aa7.16□□□□□ -1.26
HMGB1P4-201ENST00000455362 UHRF1BP1Q6BDS2 1440 aa7.16□□□□□ -1.26
HMGB1P4-201ENST00000455362 SYNMO15061 1565 aa7.16□□□□□ -1.26
HMGB1P4-201ENST00000455362 UGGT1Q9NYU2 1555 aa7.16□□□□□ -1.26
HMGB1P4-201ENST00000455362 TRIM6-TRIM34B2RNG4 842 aa7.15□□□□□ -1.26
HMGB1P4-201ENST00000455362 SMARCA5O60264 1052 aaPredicted RBP7.15□□□□□ -1.26
HMGB1P4-201ENST00000455362 LSM11P83369 360 aaKnown RBP eCLIP7.15□□□□□ -1.26
HMGB1P4-201ENST00000455362 ZNF326Q5BKZ1 582 aaKnown RBP7.15□□□□□ -1.26
HMGB1P4-201ENST00000455362 TMEM164Q5U3C3 297 aa7.15□□□□□ -1.26
HMGB1P4-201ENST00000455362 TBC1D9Q6ZT07 1266 aa7.15□□□□□ -1.26
HMGB1P4-201ENST00000455362 STAC3Q96MF2 364 aa7.15□□□□□ -1.26
HMGB1P4-201ENST00000455362 POLR3GLQ9BT43 218 aa7.15□□□□□ -1.26
HMGB1P4-201ENST00000455362 ZBED2Q9BTP6 218 aa7.15□□□□□ -1.26
HMGB1P4-201ENST00000455362 NEURL4Q96JN8 1562 aa7.15□□□□□ -1.27
HMGB1P4-201ENST00000455362 MROH2AA6NES4 1674 aa7.14□□□□□ -1.27
HMGB1P4-201ENST00000455362 PIK3C2BO00750 1634 aa7.14□□□□□ -1.27
HMGB1P4-201ENST00000455362 HOXA2O43364 376 aa7.14□□□□□ -1.27
HMGB1P4-201ENST00000455362 HRO43593 1189 aa7.14□□□□□ -1.27
HMGB1P4-201ENST00000455362 ATP9BO43861 1147 aa7.14□□□□□ -1.27
HMGB1P4-201ENST00000455362 GCGRP47871 477 aa7.14□□□□□ -1.27
HMGB1P4-201ENST00000455362 HDGFP51858 240 aaKnown RBP7.14□□□□□ -1.27
HMGB1P4-201ENST00000455362 MARSP56192 900 aaKnown RBP7.14□□□□□ -1.27
HMGB1P4-201ENST00000455362 ERVK-7P63135 1459 aa7.14□□□□□ -1.27
HMGB1P4-201ENST00000455362 ELOAQ14241 798 aaKnown RBP7.14□□□□□ -1.27
HMGB1P4-201ENST00000455362 GRIPAP1Q4V328 841 aa7.14□□□□□ -1.27
HMGB1P4-201ENST00000455362 PNMA1Q8ND90 353 aa7.14□□□□□ -1.27
HMGB1P4-201ENST00000455362 TSC1Q92574 1164 aa7.14□□□□□ -1.27
HMGB1P4-201ENST00000455362 SLC4A5Q9BY07 1137 aa7.14□□□□□ -1.27
HMGB1P4-201ENST00000455362 TRIM34Q9BYJ4 488 aa7.14□□□□□ -1.27
HMGB1P4-201ENST00000455362 HMX1Q9NP08 348 aaPredicted RBP7.14□□□□□ -1.27
HMGB1P4-201ENST00000455362 PPP1R1BQ9UD71 204 aaPredicted RBP7.14□□□□□ -1.27
HMGB1P4-201ENST00000455362 RPGRIP1LQ68CZ1 1315 aa7.13□□□□□ -1.27
HMGB1P4-201ENST00000455362 MTMR2Q13614 643 aa7.13□□□□□ -1.27
HMGB1P4-201ENST00000455362 SPNS2Q8IVW8 549 aa7.13□□□□□ -1.27
HMGB1P4-201ENST00000455362 SPATA32Q96LK8 384 aa7.13□□□□□ -1.27
HMGB1P4-201ENST00000455362 KCNK17Q96T54 332 aa7.13□□□□□ -1.27
HMGB1P4-201ENST00000455362 BIN2Q9UBW5 565 aaPredicted RBP7.13□□□□□ -1.27
HMGB1P4-201ENST00000455362 FER1L4A9Z1Z3 1794 aa7.13□□□□□ -1.27
HMGB1P4-201ENST00000455362 SPATA31D1Q6ZQQ2 1576 aa7.12□□□□□ -1.27
HMGB1P4-201ENST00000455362 PRAG1Q86YV5 1406 aa7.12□□□□□ -1.27
HMGB1P4-201ENST00000455362 SOWAHDA6NJG2 315 aa7.12□□□□□ -1.27
HMGB1P4-201ENST00000455362 BHMG1C9JSJ3 638 aaPredicted RBP7.12□□□□□ -1.27
HMGB1P4-201ENST00000455362 GPR37L1O60883 481 aa7.12□□□□□ -1.27
HMGB1P4-201ENST00000455362 NCLP19338 710 aaKnown RBP7.12□□□□□ -1.27
HMGB1P4-201ENST00000455362 CEBPAP49715 358 aaPredicted RBP7.12□□□□□ -1.27
HMGB1P4-201ENST00000455362 ZC3H6P61129 1189 aaKnown RBP7.12□□□□□ -1.27
HMGB1P4-201ENST00000455362 CTDSPL2Q05D32 466 aa7.12□□□□□ -1.27
HMGB1P4-201ENST00000455362 MMRN1Q13201 1228 aa7.12□□□□□ -1.27
HMGB1P4-201ENST00000455362 STK32AQ8WU08 396 aa7.12□□□□□ -1.27
HMGB1P4-201ENST00000455362 NOVA2Q9UNW9 492 aaKnown RBP7.12□□□□□ -1.27
HMGB1P4-201ENST00000455362 MYO5BQ9ULV0 1848 aa7.12□□□□□ -1.27
HMGB1P4-201ENST00000455362 ADGRB3O60242 1522 aa7.11□□□□□ -1.27
HMGB1P4-201ENST00000455362 TK2O00142 265 aa7.11□□□□□ -1.27
HMGB1P4-201ENST00000455362 EIF4G2P78344 907 aaKnown RBP eCLIP7.11□□□□□ -1.27
HMGB1P4-201ENST00000455362 SF3A1Q15459 793 aaKnown RBP7.11□□□□□ -1.27
HMGB1P4-201ENST00000455362 BCL11AQ9H165 835 aa7.11□□□□□ -1.27
HMGB1P4-201ENST00000455362 ZMIZ1Q9ULJ6 1067 aa7.11□□□□□ -1.27
HMGB1P4-201ENST00000455362 VPS9D1Q9Y2B5 631 aa7.11□□□□□ -1.27
HMGB1P4-201ENST00000455362 TMEM131LA2VDJ0 1609 aa7.11□□□□□ -1.27
HMGB1P4-201ENST00000455362 SETD1BQ9UPS6 1966 aaKnown RBP7.11□□□□□ -1.27
HMGB1P4-201ENST00000455362 RALGAPBQ86X10 1494 aa7.11□□□□□ -1.27
HMGB1P4-201ENST00000455362 PPLO60437 1756 aa7.1□□□□□ -1.27
HMGB1P4-201ENST00000455362 IFT172Q9UG01 1749 aa7.1□□□□□ -1.27
HMGB1P4-201ENST00000455362 TNRQ92752 1358 aa7.1□□□□□ -1.27
HMGB1P4-201ENST00000455362 C3P01024 1663 aa7.1□□□□□ -1.27
HMGB1P4-201ENST00000455362 ADAMTSL3P82987 1691 aa7.1□□□□□ -1.27
HMGB1P4-201ENST00000455362 ADGRF5Q8IZF2 1346 aa7.1□□□□□ -1.27
HMGB1P4-201ENST00000455362 C3orf80F5H4A9 247 aa7.1□□□□□ -1.27
HMGB1P4-201ENST00000455362 HSPA5P11021 654 aaKnown RBP7.1□□□□□ -1.27
HMGB1P4-201ENST00000455362 NBPF1Q3BBV0 1214 aa7.1□□□□□ -1.27
HMGB1P4-201ENST00000455362 PHLDB3Q6NSJ2 640 aa7.1□□□□□ -1.27
HMGB1P4-201ENST00000455362 UBXN4Q92575 508 aa7.1□□□□□ -1.27
HMGB1P4-201ENST00000455362 HIRIP3Q9BW71 556 aaPredicted RBP7.1□□□□□ -1.27
HMGB1P4-201ENST00000455362 TRPM1Q7Z4N2 1603 aa7.09□□□□□ -1.27
HMGB1P4-201ENST00000455362 ANKRD33BA6NCL7 494 aa7.09□□□□□ -1.27
HMGB1P4-201ENST00000455362 C6orf229H3BNL8 230 aa7.09□□□□□ -1.27
HMGB1P4-201ENST00000455362 SMAPO00193 183 aa7.09□□□□□ -1.27
HMGB1P4-201ENST00000455362 SSFA2P28290 1259 aa7.09□□□□□ -1.27
HMGB1P4-201ENST00000455362 PROX2Q3B8N5 592 aa7.09□□□□□ -1.27
HMGB1P4-201ENST00000455362 ADGRD1Q6QNK2 874 aa7.09□□□□□ -1.27
HMGB1P4-201ENST00000455362 LRRN4Q8WUT4 740 aa7.09□□□□□ -1.27
HMGB1P4-201ENST00000455362 CARD11Q9BXL7 1154 aa7.09□□□□□ -1.27
HMGB1P4-201ENST00000455362 MYOM2P54296 1465 aa7.09□□□□□ -1.27
HMGB1P4-201ENST00000455362 NRXN1Q9ULB1 1477 aa7.09□□□□□ -1.27
HMGB1P4-201ENST00000455362 MADDQ8WXG6 1647 aa7.09□□□□□ -1.28
HMGB1P4-201ENST00000455362 GPRASP1Q5JY77 1395 aa7.08□□□□□ -1.28
HMGB1P4-201ENST00000455362 NEXMIFQ5QGS0 1516 aa7.08□□□□□ -1.28
HMGB1P4-201ENST00000455362 VAMP1P23763 118 aa7.08□□□□□ -1.28
HMGB1P4-201ENST00000455362 NOM1Q5C9Z4 860 aaKnown RBP7.08□□□□□ -1.28
HMGB1P4-201ENST00000455362 ANKRD13DQ6ZTN6 518 aa7.08□□□□□ -1.28
HMGB1P4-201ENST00000455362 A2ML1A8K2U0 1454 aa7.08□□□□□ -1.28
HMGB1P4-201ENST00000455362 RIMS1Q86UR5 1692 aaKnown RBP7.08□□□□□ -1.28
HMGB1P4-201ENST00000455362 ZFYVE9O95405 1425 aa7.08□□□□□ -1.28
HMGB1P4-201ENST00000455362 ROCK2O75116 1388 aaKnown RBP7.08□□□□□ -1.28
HMGB1P4-201ENST00000455362 KIAA1210Q9ULL0 1709 aa7.07□□□□□ -1.28
HMGB1P4-201ENST00000455362 SERPINB4P48594 390 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms