RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 TEFQ10587 303 aa21.64■■□□□ 1.05
CCDC90B-202ENST00000455220 BABAM1Q9NWV8 329 aa21.64■■□□□ 1.05
CCDC90B-202ENST00000455220 CHL1O00533 1208 aa21.63■■□□□ 1.05
CCDC90B-202ENST00000455220 TAF7Q15545 349 aaPredicted RBP21.63■■□□□ 1.05
CCDC90B-202ENST00000455220 ITGB4P16144 1822 aa21.62■■□□□ 1.05
CCDC90B-202ENST00000455220 KRT27Q7Z3Y8 459 aa21.61■■□□□ 1.05
CCDC90B-202ENST00000455220 MYH16Q9H6N6 1097 aa21.61■■□□□ 1.05
CCDC90B-202ENST00000455220 KDM3BQ7LBC6 1761 aa21.61■■□□□ 1.05
CCDC90B-202ENST00000455220 CABP4P57796 275 aa21.61■■□□□ 1.05
CCDC90B-202ENST00000455220 DUSP27Q5VZP5 1158 aa21.61■■□□□ 1.05
CCDC90B-202ENST00000455220 NFATC2IPQ8NCF5 419 aa21.6■■□□□ 1.05
CCDC90B-202ENST00000455220 FANCIQ9NVI1 1328 aa21.59■■□□□ 1.05
CCDC90B-202ENST00000455220 MBIPQ9NS73 344 aa21.59■■□□□ 1.05
CCDC90B-202ENST00000455220 LAS1LQ9Y4W2 734 aaKnown RBP21.59■■□□□ 1.05
CCDC90B-202ENST00000455220 KAT6BQ8WYB5 2073 aa21.58■■□□□ 1.04
CCDC90B-202ENST00000455220 PAPPAQ13219 1627 aa21.58■■□□□ 1.04
CCDC90B-202ENST00000455220 SBF2Q86WG5 1849 aa21.58■■□□□ 1.04
CCDC90B-202ENST00000455220 TSR2Q969E8 191 aaKnown RBP21.57■■□□□ 1.04
CCDC90B-202ENST00000455220 TSPYL4Q9UJ04 414 aa21.57■■□□□ 1.04
CCDC90B-202ENST00000455220 NHSQ6T4R5 1651 aa21.57■■□□□ 1.04
CCDC90B-202ENST00000455220 BTBD11A6QL63 1104 aa21.57■■□□□ 1.04
CCDC90B-202ENST00000455220 TMOD3Q9NYL9 352 aa21.57■■□□□ 1.04
CCDC90B-202ENST00000455220 PRIM1P49642 420 aaKnown RBP21.56■■□□□ 1.04
CCDC90B-202ENST00000455220 FAM182BQ5T319 152 aa21.56■■□□□ 1.04
CCDC90B-202ENST00000455220 PIGBQ92521 554 aa21.56■■□□□ 1.04
CCDC90B-202ENST00000455220 MIS18AQ9NYP9 233 aa21.56■■□□□ 1.04
CCDC90B-202ENST00000455220 EP400Q96L91 3159 aa21.54■■□□□ 1.04
CCDC90B-202ENST00000455220 FAM196AQ6ZSG2 479 aa21.54■■□□□ 1.04
CCDC90B-202ENST00000455220 ACSBG1Q96GR2 724 aa21.54■■□□□ 1.04
CCDC90B-202ENST00000455220 UBR2Q8IWV8 1755 aa21.53■■□□□ 1.04
CCDC90B-202ENST00000455220 ZNF790Q6PG37 636 aa21.53■■□□□ 1.04
CCDC90B-202ENST00000455220 KCNQ2O43526 872 aa21.52■■□□□ 1.04
CCDC90B-202ENST00000455220 SYTL4Q96C24 671 aaPredicted RBP21.52■■□□□ 1.04
CCDC90B-202ENST00000455220 KCNQ3O43525 872 aa21.51■■□□□ 1.03
CCDC90B-202ENST00000455220 SLC39A6Q13433 755 aa21.51■■□□□ 1.03
CCDC90B-202ENST00000455220 EIF4A1P60842 406 aaKnown RBP21.5■■□□□ 1.03
CCDC90B-202ENST00000455220 HEG1Q9ULI3 1381 aa21.5■■□□□ 1.03
CCDC90B-202ENST00000455220 KCPQ6ZWJ8 1503 aa21.5■■□□□ 1.03
CCDC90B-202ENST00000455220 EXOSC9Q06265 439 aaKnown RBP21.49■■□□□ 1.03
CCDC90B-202ENST00000455220 BTAF1O14981 1849 aa21.49■■□□□ 1.03
CCDC90B-202ENST00000455220 TTC5Q8N0Z6 440 aa21.48■■□□□ 1.03
CCDC90B-202ENST00000455220 ATG3Q9NT62 314 aa21.48■■□□□ 1.03
CCDC90B-202ENST00000455220 ASAP1Q9ULH1 1129 aa21.48■■□□□ 1.03
CCDC90B-202ENST00000455220 CT47B1P0C2W7 299 aaPredicted RBP21.47■■□□□ 1.03
CCDC90B-202ENST00000455220 C8orf58Q8NAV2 365 aa21.47■■□□□ 1.03
CCDC90B-202ENST00000455220 BCL11BQ9C0K0 894 aaPredicted RBP21.47■■□□□ 1.03
CCDC90B-202ENST00000455220 CENPBP07199 599 aaPredicted RBP21.46■■□□□ 1.03
CCDC90B-202ENST00000455220 KRT24Q2M2I5 525 aa21.46■■□□□ 1.03
CCDC90B-202ENST00000455220 PTF1AQ7RTS3 328 aa21.46■■□□□ 1.03
CCDC90B-202ENST00000455220 SOS1Q07889 1333 aaPredicted RBP21.45■■□□□ 1.02
CCDC90B-202ENST00000455220 TSPYL6Q8N831 410 aa21.45■■□□□ 1.02
CCDC90B-202ENST00000455220 ZNF496Q96IT1 587 aaPredicted RBP21.45■■□□□ 1.02
CCDC90B-202ENST00000455220 HOXB7P09629 217 aa21.44■■□□□ 1.02
CCDC90B-202ENST00000455220 FMNL2Q96PY5 1086 aa21.44■■□□□ 1.02
CCDC90B-202ENST00000455220 TWISTNBQ3B726 338 aaPredicted RBP21.44■■□□□ 1.02
CCDC90B-202ENST00000455220 SMARCC1Q92922 1105 aaPredicted RBP21.44■■□□□ 1.02
CCDC90B-202ENST00000455220 VAMP4O75379 141 aa21.43■■□□□ 1.02
CCDC90B-202ENST00000455220 GIGYF1O75420 1035 aaPredicted RBP21.43■■□□□ 1.02
CCDC90B-202ENST00000455220 PALLDQ8WX93 1383 aa21.42■■□□□ 1.02
CCDC90B-202ENST00000455220 CICQ96RK0 1608 aaPredicted RBP21.42■■□□□ 1.02
CCDC90B-202ENST00000455220 C5P01031 1676 aa21.41■■□□□ 1.02
CCDC90B-202ENST00000455220 TRIM37O94972 964 aa21.41■■□□□ 1.02
CCDC90B-202ENST00000455220 VSIG10Q8N0Z9 540 aa21.41■■□□□ 1.02
CCDC90B-202ENST00000455220 ZNF428Q96B54 188 aa21.41■■□□□ 1.02
CCDC90B-202ENST00000455220 ZNF831Q5JPB2 1677 aa21.41■■□□□ 1.02
CCDC90B-202ENST00000455220 ELL2O00472 640 aaPredicted RBP21.4■■□□□ 1.02
CCDC90B-202ENST00000455220 PTCD1O75127 700 aaKnown RBP21.4■■□□□ 1.02
CCDC90B-202ENST00000455220 SNRPA1P09661 255 aaKnown RBP21.4■■□□□ 1.02
CCDC90B-202ENST00000455220 LY75O60449 1722 aa21.4■■□□□ 1.02
CCDC90B-202ENST00000455220 TNS1Q9HBL0 1735 aaKnown RBP21.4■■□□□ 1.02
CCDC90B-202ENST00000455220 LAMB4A4D0S4 1761 aa21.39■■□□□ 1.02
CCDC90B-202ENST00000455220 SLC4A9Q96Q91 983 aa21.38■■□□□ 1.01
CCDC90B-202ENST00000455220 TJP1Q07157 1748 aa21.37■■□□□ 1.01
CCDC90B-202ENST00000455220 PRAMEF22A3QJZ6 481 aa21.37■■□□□ 1.01
CCDC90B-202ENST00000455220 RBM42Q9BTD8 480 aaKnown RBP21.37■■□□□ 1.01
CCDC90B-202ENST00000455220 RCAN3Q9UKA8 241 aa21.37■■□□□ 1.01
CCDC90B-202ENST00000455220 LOC102724428A0A0B4J2F2 783 aa21.36■■□□□ 1.01
CCDC90B-202ENST00000455220 RARSP54136 660 aaKnown RBP21.36■■□□□ 1.01
CCDC90B-202ENST00000455220 SIK1P57059 783 aa21.36■■□□□ 1.01
CCDC90B-202ENST00000455220 CHMP4AQ9BY43 222 aa21.36■■□□□ 1.01
CCDC90B-202ENST00000455220 ALDH1L2Q3SY69 923 aa21.35■■□□□ 1.01
CCDC90B-202ENST00000455220 TEX13AQ9BXU3 409 aaPredicted RBP21.35■■□□□ 1.01
CCDC90B-202ENST00000455220 RGPD3A6NKT7 1758 aaPredicted RBP21.34■■□□□ 1.01
CCDC90B-202ENST00000455220 RGPD4Q7Z3J3 1758 aa21.34■■□□□ 1.01
CCDC90B-202ENST00000455220 HDGFL1Q5TGJ6 251 aa21.34■■□□□ 1.01
CCDC90B-202ENST00000455220 USP16Q9Y5T5 823 aa21.34■■□□□ 1.01
CCDC90B-202ENST00000455220 CCDC30Q5VVM6 783 aa21.33■■□□□ 1.01
CCDC90B-202ENST00000455220 SSH1Q8WYL5 1049 aa21.33■■□□□ 1.01
CCDC90B-202ENST00000455220 CACNA1FO60840 1977 aa21.33■■□□□ 1
CCDC90B-202ENST00000455220 PLSCR1O15162 318 aa21.32■■□□□ 1
CCDC90B-202ENST00000455220 DNAJC10Q8IXB1 793 aa21.32■■□□□ 1
CCDC90B-202ENST00000455220 COL5A3P25940 1745 aaPredicted RBP21.32■■□□□ 1
CCDC90B-202ENST00000455220 EIF2S2P20042 333 aaKnown RBP21.31■■□□□ 1
CCDC90B-202ENST00000455220 ATP6V1AP38606 617 aa21.31■■□□□ 1
CCDC90B-202ENST00000455220 BRPF1P55201 1214 aaPredicted RBP21.31■■□□□ 1
CCDC90B-202ENST00000455220 ERBB4Q15303 1308 aa21.31■■□□□ 1
CCDC90B-202ENST00000455220 APBA3O96018 575 aa21.3■■□□□ 1
CCDC90B-202ENST00000455220 ITPK1Q13572 414 aa21.3■■□□□ 1
CCDC90B-202ENST00000455220 BCAR3O75815 825 aa21.29■■□□□ 1
CCDC90B-202ENST00000455220 STARD3NLO95772 234 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms