RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 DCAF5Q96JK2 942 aa8.68□□□□□ -1.02
ECHDC1-210ENST00000454859 STK31Q9BXU1 1019 aa8.68□□□□□ -1.02
ECHDC1-210ENST00000454859 NOB1Q9ULX3 412 aaKnown RBP8.68□□□□□ -1.02
ECHDC1-210ENST00000454859 NPM3O75607 178 aaKnown RBP8.68□□□□□ -1.02
ECHDC1-210ENST00000454859 NKX1-1Q15270 411 aaPredicted RBP8.68□□□□□ -1.02
ECHDC1-210ENST00000454859 C20orf194Q5TEA3 1177 aa8.68□□□□□ -1.02
ECHDC1-210ENST00000454859 CSB-PGBD3P0DP91 1061 aa8.67□□□□□ -1.02
ECHDC1-210ENST00000454859 THUMPD2Q9BTF0 503 aaKnown RBP8.67□□□□□ -1.02
ECHDC1-210ENST00000454859 PCDH11XQ9BZA7 1347 aa8.67□□□□□ -1.02
ECHDC1-210ENST00000454859 PCDH11YQ9BZA8 1340 aa8.67□□□□□ -1.02
ECHDC1-210ENST00000454859 NLRP2Q9NX02 1062 aa8.67□□□□□ -1.02
ECHDC1-210ENST00000454859 LAMB4A4D0S4 1761 aa8.67□□□□□ -1.02
ECHDC1-210ENST00000454859 HDAC5Q9UQL6 1122 aa8.66□□□□□ -1.02
ECHDC1-210ENST00000454859 THRAP3Q9Y2W1 955 aaKnown RBP8.66□□□□□ -1.02
ECHDC1-210ENST00000454859 PAPPAQ13219 1627 aa8.66□□□□□ -1.02
ECHDC1-210ENST00000454859 ERVV-2B6SEH9 535 aa8.66□□□□□ -1.02
ECHDC1-210ENST00000454859 PHKG2P15735 406 aa8.66□□□□□ -1.02
ECHDC1-210ENST00000454859 CCT4P50991 539 aaKnown RBP8.66□□□□□ -1.02
ECHDC1-210ENST00000454859 DCTN1Q14203 1278 aa8.66□□□□□ -1.02
ECHDC1-210ENST00000454859 ZBTB40Q9NUA8 1239 aa8.66□□□□□ -1.02
ECHDC1-210ENST00000454859 UBR2Q8IWV8 1755 aa8.66□□□□□ -1.02
ECHDC1-210ENST00000454859 NRAPQ86VF7 1730 aa8.66□□□□□ -1.02
ECHDC1-210ENST00000454859 SHANK3Q9BYB0 1731 aa8.66□□□□□ -1.02
ECHDC1-210ENST00000454859 MEGF6O75095 1541 aa8.66□□□□□ -1.02
ECHDC1-210ENST00000454859 ERBB4Q15303 1308 aa8.65□□□□□ -1.02
ECHDC1-210ENST00000454859 TSPYL6Q8N831 410 aa8.65□□□□□ -1.02
ECHDC1-210ENST00000454859 PANK1Q8TE04 598 aa8.65□□□□□ -1.02
ECHDC1-210ENST00000454859 COG6Q9Y2V7 657 aa8.65□□□□□ -1.02
ECHDC1-210ENST00000454859 IL2RBP14784 551 aa8.65□□□□□ -1.03
ECHDC1-210ENST00000454859 EIF4A1P60842 406 aaKnown RBP8.65□□□□□ -1.03
ECHDC1-210ENST00000454859 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.65□□□□□ -1.03
ECHDC1-210ENST00000454859 EIF5BO60841 1220 aaKnown RBP8.64□□□□□ -1.03
ECHDC1-210ENST00000454859 DDX17Q92841 729 aaKnown RBP8.64□□□□□ -1.03
ECHDC1-210ENST00000454859 SLC52A2Q9HAB3 445 aa8.64□□□□□ -1.03
ECHDC1-210ENST00000454859 ZBTB7CA1YPR0 619 aa8.64□□□□□ -1.03
ECHDC1-210ENST00000454859 BTBD11A6QL63 1104 aa8.64□□□□□ -1.03
ECHDC1-210ENST00000454859 RLBP1P12271 317 aa8.64□□□□□ -1.03
ECHDC1-210ENST00000454859 USHBP1Q8N6Y0 703 aa8.64□□□□□ -1.03
ECHDC1-210ENST00000454859 ZCRB1Q8TBF4 217 aaKnown RBP8.64□□□□□ -1.03
ECHDC1-210ENST00000454859 DISP2A7MBM2 1401 aa8.64□□□□□ -1.03
ECHDC1-210ENST00000454859 RGS12O14924 1447 aa8.64□□□□□ -1.03
ECHDC1-210ENST00000454859 ZBTB7BO15156 539 aaPredicted RBP8.63□□□□□ -1.03
ECHDC1-210ENST00000454859 EVA1CP58658 441 aa8.63□□□□□ -1.03
ECHDC1-210ENST00000454859 TOM1L2Q6ZVM7 507 aa8.63□□□□□ -1.03
ECHDC1-210ENST00000454859 ITPRIPQ8IWB1 547 aa8.63□□□□□ -1.03
ECHDC1-210ENST00000454859 GCC1Q96CN9 775 aa8.63□□□□□ -1.03
ECHDC1-210ENST00000454859 ATP10DQ9P241 1426 aa8.63□□□□□ -1.03
ECHDC1-210ENST00000454859 RPAP2Q8IXW5 612 aaPredicted RBP8.63□□□□□ -1.03
ECHDC1-210ENST00000454859 TMEM57Q8N5G2 664 aa8.63□□□□□ -1.03
ECHDC1-210ENST00000454859 CABLES1Q8TDN4 633 aa8.63□□□□□ -1.03
ECHDC1-210ENST00000454859 KDM6AO15550 1401 aaPredicted RBP8.63□□□□□ -1.03
ECHDC1-210ENST00000454859 CICQ96RK0 1608 aaPredicted RBP8.62□□□□□ -1.03
ECHDC1-210ENST00000454859 BCL2L13Q9BXK5 485 aa8.62□□□□□ -1.03
ECHDC1-210ENST00000454859 HYPKQ9NX55 129 aa8.62□□□□□ -1.03
ECHDC1-210ENST00000454859 DBF4Q9UBU7 674 aaPredicted RBP8.62□□□□□ -1.03
ECHDC1-210ENST00000454859 SLC4A2P04920 1241 aa8.62□□□□□ -1.03
ECHDC1-210ENST00000454859 GNAI3P08754 354 aa8.62□□□□□ -1.03
ECHDC1-210ENST00000454859 SMC5Q8IY18 1101 aa8.62□□□□□ -1.03
ECHDC1-210ENST00000454859 JCADQ9P266 1359 aa8.61□□□□□ -1.03
ECHDC1-210ENST00000454859 SPATA31A6Q5VVP1 1343 aa8.61□□□□□ -1.03
ECHDC1-210ENST00000454859 ZNF831Q5JPB2 1677 aa8.61□□□□□ -1.03
ECHDC1-210ENST00000454859 CHRNA2Q15822 529 aa8.61□□□□□ -1.03
ECHDC1-210ENST00000454859 HDGFL1Q5TGJ6 251 aa8.61□□□□□ -1.03
ECHDC1-210ENST00000454859 LGR6Q9HBX8 967 aa8.61□□□□□ -1.03
ECHDC1-210ENST00000454859 SLIT2O94813 1529 aa8.61□□□□□ -1.03
ECHDC1-210ENST00000454859 GIGYF1O75420 1035 aaPredicted RBP8.6□□□□□ -1.03
ECHDC1-210ENST00000454859 ZNF790Q6PG37 636 aa8.6□□□□□ -1.03
ECHDC1-210ENST00000454859 TEX13AQ9BXU3 409 aaPredicted RBP8.6□□□□□ -1.03
ECHDC1-210ENST00000454859 TSHZ2Q9NRE2 1034 aa8.6□□□□□ -1.03
ECHDC1-210ENST00000454859 TNS2Q63HR2 1409 aa8.6□□□□□ -1.03
ECHDC1-210ENST00000454859 HMMRO75330 724 aa8.6□□□□□ -1.03
ECHDC1-210ENST00000454859 DDX58O95786 925 aaKnown RBP8.6□□□□□ -1.03
ECHDC1-210ENST00000454859 FLIIQ13045 1269 aa8.6□□□□□ -1.03
ECHDC1-210ENST00000454859 MPRIPQ6WCQ1 1025 aa8.6□□□□□ -1.03
ECHDC1-210ENST00000454859 FMNL2Q96PY5 1086 aa8.6□□□□□ -1.03
ECHDC1-210ENST00000454859 CYP27B1O15528 508 aa8.59□□□□□ -1.03
ECHDC1-210ENST00000454859 SNRPA1P09661 255 aaKnown RBP8.59□□□□□ -1.03
ECHDC1-210ENST00000454859 HOXD11P31277 338 aaPredicted RBP8.59□□□□□ -1.03
ECHDC1-210ENST00000454859 BARGINQ6ZT62 677 aa8.59□□□□□ -1.03
ECHDC1-210ENST00000454859 VSIG10Q8N0Z9 540 aa8.59□□□□□ -1.03
ECHDC1-210ENST00000454859 DDX21Q9NR30 783 aaKnown RBP eCLIP8.59□□□□□ -1.03
ECHDC1-210ENST00000454859 RNF216Q9NWF9 866 aaPredicted RBP8.59□□□□□ -1.03
ECHDC1-210ENST00000454859 PCDHB15Q9Y5E8 787 aa8.59□□□□□ -1.03
ECHDC1-210ENST00000454859 ITGB4P16144 1822 aa8.59□□□□□ -1.03
ECHDC1-210ENST00000454859 ALDH1L1O75891 902 aa8.59□□□□□ -1.03
ECHDC1-210ENST00000454859 CABP4P57796 275 aa8.59□□□□□ -1.03
ECHDC1-210ENST00000454859 TTC5Q8N0Z6 440 aa8.59□□□□□ -1.03
ECHDC1-210ENST00000454859 C5P01031 1676 aa8.58□□□□□ -1.04
ECHDC1-210ENST00000454859 ELL2O00472 640 aaPredicted RBP8.58□□□□□ -1.04
ECHDC1-210ENST00000454859 COL15A1P39059 1388 aa8.58□□□□□ -1.04
ECHDC1-210ENST00000454859 ANKRD44Q8N8A2 993 aa8.58□□□□□ -1.04
ECHDC1-210ENST00000454859 BTG4Q9NY30 223 aa8.58□□□□□ -1.04
ECHDC1-210ENST00000454859 GLI3P10071 1580 aa8.57□□□□□ -1.04
ECHDC1-210ENST00000454859 LARP1Q6PKG0 1096 aaKnown RBP8.57□□□□□ -1.04
ECHDC1-210ENST00000454859 TOGARAM1Q9Y4F4 1720 aa8.57□□□□□ -1.04
ECHDC1-210ENST00000454859 IGHDP01880 384 aa8.57□□□□□ -1.04
ECHDC1-210ENST00000454859 HMGB2P26583 209 aaKnown RBP8.57□□□□□ -1.04
ECHDC1-210ENST00000454859 FKBP5Q13451 457 aaPredicted RBP8.57□□□□□ -1.04
ECHDC1-210ENST00000454859 ILDR1Q86SU0 546 aaPredicted RBP8.57□□□□□ -1.04
ECHDC1-210ENST00000454859 MIS18AQ9NYP9 233 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms