RNA–Protein interactions for RNA: ENST00000454498.6

CSGALNACT1-203, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 4,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-203ENST00000454498 BICDL1Q6ZP65 573 aa11.99□□□□□ -0.49
CSGALNACT1-203ENST00000454498 TSPYL6Q8N831 410 aa11.99□□□□□ -0.49
CSGALNACT1-203ENST00000454498 CCDC8Q9H0W5 538 aaPredicted RBP11.99□□□□□ -0.49
CSGALNACT1-203ENST00000454498 KDM4AO75164 1064 aa11.99□□□□□ -0.49
CSGALNACT1-203ENST00000454498 METTL24Q5JXM2 366 aa11.99□□□□□ -0.49
CSGALNACT1-203ENST00000454498 LRRC59Q96AG4 307 aaKnown RBP11.99□□□□□ -0.49
CSGALNACT1-203ENST00000454498 TNNQ9UQP3 1299 aa11.99□□□□□ -0.49
CSGALNACT1-203ENST00000454498 GCC2Q8IWJ2 1684 aa11.99□□□□□ -0.49
CSGALNACT1-203ENST00000454498 VAMP4O75379 141 aa11.98□□□□□ -0.49
CSGALNACT1-203ENST00000454498 GCP02774 474 aa11.98□□□□□ -0.49
CSGALNACT1-203ENST00000454498 ATP2B1P20020 1258 aa11.98□□□□□ -0.49
CSGALNACT1-203ENST00000454498 BMP2KLQ5H9B9 411 aa11.98□□□□□ -0.49
CSGALNACT1-203ENST00000454498 PPP1R42Q7Z4L9 355 aa11.98□□□□□ -0.49
CSGALNACT1-203ENST00000454498 NACAP1Q9BZK3 213 aa11.98□□□□□ -0.49
CSGALNACT1-203ENST00000454498 CIZ1Q9ULV3 898 aaPredicted RBP11.98□□□□□ -0.49
CSGALNACT1-203ENST00000454498 RLBP1P12271 317 aa11.98□□□□□ -0.49
CSGALNACT1-203ENST00000454498 MRE11P49959 708 aa11.98□□□□□ -0.49
CSGALNACT1-203ENST00000454498 HDAC1Q13547 482 aaPredicted RBP11.98□□□□□ -0.49
CSGALNACT1-203ENST00000454498 IDH1O75874 414 aaKnown RBP11.98□□□□□ -0.49
CSGALNACT1-203ENST00000454498 XBP1P17861 261 aa11.98□□□□□ -0.49
CSGALNACT1-203ENST00000454498 KRT24Q2M2I5 525 aa11.98□□□□□ -0.49
CSGALNACT1-203ENST00000454498 CABLES1Q8TDN4 633 aa11.98□□□□□ -0.49
CSGALNACT1-203ENST00000454498 HOOK1Q9UJC3 728 aaKnown RBP11.98□□□□□ -0.49
CSGALNACT1-203ENST00000454498 WDR33Q9C0J8 1336 aaKnown RBP11.98□□□□□ -0.49
CSGALNACT1-203ENST00000454498 SPATA31E1Q6ZUB1 1445 aa11.97□□□□□ -0.49
CSGALNACT1-203ENST00000454498 ATP5J2-PTCD1G3V325 749 aa11.97□□□□□ -0.49
CSGALNACT1-203ENST00000454498 SNRPA1P09661 255 aaKnown RBP11.97□□□□□ -0.49
CSGALNACT1-203ENST00000454498 ZSCAN25Q6NSZ9 544 aa11.97□□□□□ -0.49
CSGALNACT1-203ENST00000454498 UBE3BQ7Z3V4 1068 aa11.97□□□□□ -0.49
CSGALNACT1-203ENST00000454498 ZFYVE9O95405 1425 aa11.97□□□□□ -0.49
CSGALNACT1-203ENST00000454498 KLHL34Q8N239 644 aa11.97□□□□□ -0.49
CSGALNACT1-203ENST00000454498 RSPH6AQ9H0K4 717 aa11.97□□□□□ -0.49
CSGALNACT1-203ENST00000454498 IGHMBP2P38935 993 aaKnown RBP11.97□□□□□ -0.49
CSGALNACT1-203ENST00000454498 MRPL50Q8N5N7 158 aaKnown RBP11.97□□□□□ -0.49
CSGALNACT1-203ENST00000454498 NGLY1Q96IV0 654 aa11.97□□□□□ -0.49
CSGALNACT1-203ENST00000454498 SLC39A6Q13433 755 aa11.97□□□□□ -0.49
CSGALNACT1-203ENST00000454498 KRT32Q14532 448 aa11.97□□□□□ -0.49
CSGALNACT1-203ENST00000454498 UBE2Q2Q8WVN8 375 aa11.97□□□□□ -0.49
CSGALNACT1-203ENST00000454498 PDRG1Q9NUG6 133 aa11.97□□□□□ -0.49
CSGALNACT1-203ENST00000454498 CHPF2Q9P2E5 772 aa11.97□□□□□ -0.49
CSGALNACT1-203ENST00000454498 CTNNA3Q9UI47 895 aa11.97□□□□□ -0.49
CSGALNACT1-203ENST00000454498 PTPRTO14522 1441 aa11.96□□□□□ -0.49
CSGALNACT1-203ENST00000454498 YEATS2Q9ULM3 1422 aa11.96□□□□□ -0.49
CSGALNACT1-203ENST00000454498 NASPP49321 788 aaPredicted RBP11.96□□□□□ -0.49
CSGALNACT1-203ENST00000454498 IFIT5Q13325 482 aaKnown RBP11.96□□□□□ -0.49
CSGALNACT1-203ENST00000454498 LARP1BQ659C4 914 aaKnown RBP11.96□□□□□ -0.49
CSGALNACT1-203ENST00000454498 MCM4P33991 863 aa11.96□□□□□ -0.49
CSGALNACT1-203ENST00000454498 AKAP4Q5JQC9 854 aa11.96□□□□□ -0.49
CSGALNACT1-203ENST00000454498 GPTP24298 496 aa11.96□□□□□ -0.5
CSGALNACT1-203ENST00000454498 ANKRD13DQ6ZTN6 518 aa11.96□□□□□ -0.5
CSGALNACT1-203ENST00000454498 STK11IPQ8N1F8 1099 aa11.96□□□□□ -0.5
CSGALNACT1-203ENST00000454498 AKAP2Q9Y2D5 859 aa11.96□□□□□ -0.5
CSGALNACT1-203ENST00000454498 TPM3P06753 285 aa11.95□□□□□ -0.5
CSGALNACT1-203ENST00000454498 SLC3A2P08195 630 aaKnown RBP11.95□□□□□ -0.5
CSGALNACT1-203ENST00000454498 ARID3AQ99856 593 aa11.95□□□□□ -0.5
CSGALNACT1-203ENST00000454498 BRMS1Q9HCU9 246 aa11.95□□□□□ -0.5
CSGALNACT1-203ENST00000454498 ECHDC1Q9NTX5 307 aa11.95□□□□□ -0.5
CSGALNACT1-203ENST00000454498 TRMT112Q9UI30 125 aaKnown RBP11.95□□□□□ -0.5
CSGALNACT1-203ENST00000454498 ZNF652Q9Y2D9 606 aa11.95□□□□□ -0.5
CSGALNACT1-203ENST00000454498 TRPM2O94759 1503 aa11.95□□□□□ -0.5
CSGALNACT1-203ENST00000454498 MYO5CQ9NQX4 1742 aa11.95□□□□□ -0.5
CSGALNACT1-203ENST00000454498 CEBPZQ03701 1054 aaKnown RBP11.95□□□□□ -0.5
CSGALNACT1-203ENST00000454498 TBC1D9Q6ZT07 1266 aa11.95□□□□□ -0.5
CSGALNACT1-203ENST00000454498 CCDC47Q96A33 483 aaKnown RBP11.95□□□□□ -0.5
CSGALNACT1-203ENST00000454498 LRP2BPQ9P2M1 347 aa11.95□□□□□ -0.5
CSGALNACT1-203ENST00000454498 ABCF2Q9UG63 623 aa11.95□□□□□ -0.5
CSGALNACT1-203ENST00000454498 KDM6BO15054 1643 aa11.95□□□□□ -0.5
CSGALNACT1-203ENST00000454498 IFIT1P09914 478 aaKnown RBP11.95□□□□□ -0.5
CSGALNACT1-203ENST00000454498 CASTP20810 708 aaKnown RBP11.95□□□□□ -0.5
CSGALNACT1-203ENST00000454498 TSR1Q2NL82 804 aaKnown RBP11.95□□□□□ -0.5
CSGALNACT1-203ENST00000454498 HSP90AB3PQ58FF7 597 aa11.95□□□□□ -0.5
CSGALNACT1-203ENST00000454498 SAMD1Q6SPF0 538 aaPredicted RBP11.95□□□□□ -0.5
CSGALNACT1-203ENST00000454498 KINO60870 393 aaKnown RBP11.94□□□□□ -0.5
CSGALNACT1-203ENST00000454498 TPM1P09493 284 aa11.94□□□□□ -0.5
CSGALNACT1-203ENST00000454498 ANKRD44Q8N8A2 993 aa11.94□□□□□ -0.5
CSGALNACT1-203ENST00000454498 ZCRB1Q8TBF4 217 aaKnown RBP11.94□□□□□ -0.5
CSGALNACT1-203ENST00000454498 ZSCAN31Q96LW9 406 aaPredicted RBP11.94□□□□□ -0.5
CSGALNACT1-203ENST00000454498 TSHZ3Q63HK5 1081 aa11.94□□□□□ -0.5
CSGALNACT1-203ENST00000454498 PRPF40BQ6NWY9 871 aaKnown RBP11.94□□□□□ -0.5
CSGALNACT1-203ENST00000454498 SAMD9LQ8IVG5 1584 aa11.94□□□□□ -0.5
CSGALNACT1-203ENST00000454498 HOXC9P31274 260 aa11.94□□□□□ -0.5
CSGALNACT1-203ENST00000454498 TEX13AQ9BXU3 409 aaPredicted RBP11.94□□□□□ -0.5
CSGALNACT1-203ENST00000454498 CTDP1Q9Y5B0 961 aaPredicted RBP11.94□□□□□ -0.5
CSGALNACT1-203ENST00000454498 ADGBQ8N7X0 1667 aa11.94□□□□□ -0.5
CSGALNACT1-203ENST00000454498 NUCB1Q02818 461 aa11.94□□□□□ -0.5
CSGALNACT1-203ENST00000454498 COPS6Q7L5N1 327 aa11.94□□□□□ -0.5
CSGALNACT1-203ENST00000454498 TBC1D2Q9BYX2 928 aa11.94□□□□□ -0.5
CSGALNACT1-203ENST00000454498 RAI14Q9P0K7 980 aa11.94□□□□□ -0.5
CSGALNACT1-203ENST00000454498 EDC4Q6P2E9 1401 aaKnown RBP11.93□□□□□ -0.5
CSGALNACT1-203ENST00000454498 KRT85P78386 507 aa11.93□□□□□ -0.5
CSGALNACT1-203ENST00000454498 STK38Q15208 465 aa11.93□□□□□ -0.5
CSGALNACT1-203ENST00000454498 JARID2Q92833 1246 aaPredicted RBP11.93□□□□□ -0.5
CSGALNACT1-203ENST00000454498 IL13P35225 146 aa11.93□□□□□ -0.5
CSGALNACT1-203ENST00000454498 TDO2P48775 406 aa11.93□□□□□ -0.5
CSGALNACT1-203ENST00000454498 ANKRD20A12PQ8NF67 263 aa11.93□□□□□ -0.5
CSGALNACT1-203ENST00000454498 XAGE3Q8WTP9 111 aa11.93□□□□□ -0.5
CSGALNACT1-203ENST00000454498 IP6K1Q92551 441 aa11.93□□□□□ -0.5
CSGALNACT1-203ENST00000454498 TMEM2Q9UHN6 1383 aa11.93□□□□□ -0.5
CSGALNACT1-203ENST00000454498 LTKP29376 864 aa11.93□□□□□ -0.5
CSGALNACT1-203ENST00000454498 TRIM22Q8IYM9 498 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms