RNA–Protein interactions for RNA: ENST00000454477.1

LINC01875-201, Transcript of long intergenic non-protein coding RNA 1875, humanhuman

TSL 1 (best) BASIC

Gene LINC01875, Length 660 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01875-201ENST00000454477 NPC1L1Q9UHC9 1359 aa17.37■□□□□ 0.37
LINC01875-201ENST00000454477 TNRC18O15417 2968 aaPredicted RBP17.37■□□□□ 0.37
LINC01875-201ENST00000454477 FAM208AQ9UK61 1670 aaKnown RBP17.36■□□□□ 0.37
LINC01875-201ENST00000454477 PER1O15534 1290 aaPredicted RBP17.36■□□□□ 0.37
LINC01875-201ENST00000454477 PCDH11XQ9BZA7 1347 aa17.36■□□□□ 0.37
LINC01875-201ENST00000454477 PCDH11YQ9BZA8 1340 aa17.36■□□□□ 0.37
LINC01875-201ENST00000454477 KIF20BQ96Q89 1820 aa17.35■□□□□ 0.37
LINC01875-201ENST00000454477 MSH5O43196 834 aa17.35■□□□□ 0.37
LINC01875-201ENST00000454477 USHBP1Q8N6Y0 703 aa17.35■□□□□ 0.37
LINC01875-201ENST00000454477 EYA1Q99502 592 aa17.35■□□□□ 0.37
LINC01875-201ENST00000454477 EIF4A2Q14240 407 aaKnown RBP17.34■□□□□ 0.37
LINC01875-201ENST00000454477 KCPQ6ZWJ8 1503 aa17.34■□□□□ 0.37
LINC01875-201ENST00000454477 RGPD5Q99666 1765 aa17.33■□□□□ 0.37
LINC01875-201ENST00000454477 CCDC85CA6NKD9 419 aa17.32■□□□□ 0.36
LINC01875-201ENST00000454477 AIDAQ96BJ3 306 aa17.32■□□□□ 0.36
LINC01875-201ENST00000454477 AMOTQ4VCS5 1084 aa17.31■□□□□ 0.36
LINC01875-201ENST00000454477 CC2D1BQ5T0F9 858 aaKnown RBP17.31■□□□□ 0.36
LINC01875-201ENST00000454477 SYTL4Q96C24 671 aaPredicted RBP17.31■□□□□ 0.36
LINC01875-201ENST00000454477 RRAGCQ9HB90 399 aa17.31■□□□□ 0.36
LINC01875-201ENST00000454477 PKD1L3Q7Z443 1732 aa17.3■□□□□ 0.36
LINC01875-201ENST00000454477 HSP90AB1P08238 724 aaKnown RBP17.3■□□□□ 0.36
LINC01875-201ENST00000454477 PRIM1P49642 420 aaKnown RBP17.3■□□□□ 0.36
LINC01875-201ENST00000454477 PLEKHO1Q53GL0 409 aaPredicted RBP17.3■□□□□ 0.36
LINC01875-201ENST00000454477 MTHFSP49914 203 aa17.29■□□□□ 0.36
LINC01875-201ENST00000454477 IFNL2Q8IZJ0 200 aa17.29■□□□□ 0.36
LINC01875-201ENST00000454477 MEGF6O75095 1541 aa17.29■□□□□ 0.36
LINC01875-201ENST00000454477 NCAPD2Q15021 1401 aa17.29■□□□□ 0.36
LINC01875-201ENST00000454477 LY75O60449 1722 aa17.28■□□□□ 0.36
LINC01875-201ENST00000454477 LBX1P52954 281 aa17.28■□□□□ 0.36
LINC01875-201ENST00000454477 NKX1-1Q15270 411 aaPredicted RBP17.28■□□□□ 0.36
LINC01875-201ENST00000454477 KCNQ4P56696 695 aa17.27■□□□□ 0.36
LINC01875-201ENST00000454477 C9orf131Q5VYM1 1079 aa17.27■□□□□ 0.36
LINC01875-201ENST00000454477 SMARCC1Q92922 1105 aaPredicted RBP17.26■□□□□ 0.35
LINC01875-201ENST00000454477 CFAP53Q96M91 514 aa17.26■□□□□ 0.35
LINC01875-201ENST00000454477 CREBZFQ9NS37 354 aa17.26■□□□□ 0.35
LINC01875-201ENST00000454477 CYP27B1O15528 508 aa17.25■□□□□ 0.35
LINC01875-201ENST00000454477 DIAPH1O60610 1272 aaKnown RBP17.25■□□□□ 0.35
LINC01875-201ENST00000454477 IL13P35225 146 aa17.25■□□□□ 0.35
LINC01875-201ENST00000454477 ARHGAP27Q6ZUM4 889 aa17.25■□□□□ 0.35
LINC01875-201ENST00000454477 FLAD1Q8NFF5 587 aa17.25■□□□□ 0.35
LINC01875-201ENST00000454477 MKRN1Q9UHC7 482 aaKnown RBP17.25■□□□□ 0.35
LINC01875-201ENST00000454477 KAT6BQ8WYB5 2073 aa17.25■□□□□ 0.35
LINC01875-201ENST00000454477 C1orf141Q5JVX7 400 aa17.23■□□□□ 0.35
LINC01875-201ENST00000454477 SULT6B1Q6IMI4 303 aa17.23■□□□□ 0.35
LINC01875-201ENST00000454477 ANKRD26Q9UPS8 1709 aa17.22■□□□□ 0.35
LINC01875-201ENST00000454477 PHKG2P15735 406 aa17.22■□□□□ 0.35
LINC01875-201ENST00000454477 WBP1LQ9NX94 342 aa17.22■□□□□ 0.35
LINC01875-201ENST00000454477 NUDCQ9Y266 331 aa17.22■□□□□ 0.35
LINC01875-201ENST00000454477 BCS1LQ9Y276 419 aa17.22■□□□□ 0.35
LINC01875-201ENST00000454477 CNTNAP1P78357 1384 aa17.22■□□□□ 0.35
LINC01875-201ENST00000454477 MPRIPQ6WCQ1 1025 aa17.21■□□□□ 0.35
LINC01875-201ENST00000454477 DCAF5Q96JK2 942 aa17.21■□□□□ 0.35
LINC01875-201ENST00000454477 TMOD3Q9NYL9 352 aa17.21■□□□□ 0.35
LINC01875-201ENST00000454477 ERVV-2B6SEH9 535 aa17.2■□□□□ 0.34
LINC01875-201ENST00000454477 HSPA8P11142 646 aaKnown RBP17.2■□□□□ 0.34
LINC01875-201ENST00000454477 PRPF38BQ5VTL8 546 aaKnown RBP17.2■□□□□ 0.34
LINC01875-201ENST00000454477 CCNL1Q9UK58 526 aaPredicted RBP17.2■□□□□ 0.34
LINC01875-201ENST00000454477 KIAA1551Q9HCM1 1747 aa17.2■□□□□ 0.34
LINC01875-201ENST00000454477 CNGB1Q14028 1251 aaPredicted RBP17.19■□□□□ 0.34
LINC01875-201ENST00000454477 ZNF530Q6P9A1 599 aaPredicted RBP17.19■□□□□ 0.34
LINC01875-201ENST00000454477 MAP2P11137 1827 aaKnown RBP17.19■□□□□ 0.34
LINC01875-201ENST00000454477 KDRP35968 1356 aa17.18■□□□□ 0.34
LINC01875-201ENST00000454477 KIF13BQ9NQT8 1826 aa17.18■□□□□ 0.34
LINC01875-201ENST00000454477 VEGFAP15692 232 aaPredicted RBP17.17■□□□□ 0.34
LINC01875-201ENST00000454477 TGFB2P61812 414 aa17.16■□□□□ 0.34
LINC01875-201ENST00000454477 PIGBQ92521 554 aa17.16■□□□□ 0.34
LINC01875-201ENST00000454477 ZC3H4Q9UPT8 1303 aaKnown RBP17.16■□□□□ 0.34
LINC01875-201ENST00000454477 U2SURPO15042 1029 aaKnown RBP17.15■□□□□ 0.34
LINC01875-201ENST00000454477 CABP4P57796 275 aa17.15■□□□□ 0.34
LINC01875-201ENST00000454477 AKAP4Q5JQC9 854 aa17.15■□□□□ 0.34
LINC01875-201ENST00000454477 AEBP1Q8IUX7 1158 aa17.15■□□□□ 0.34
LINC01875-201ENST00000454477 RNF181Q9P0P0 153 aa17.15■□□□□ 0.34
LINC01875-201ENST00000454477 PPP2R1AP30153 589 aa17.14■□□□□ 0.33
LINC01875-201ENST00000454477 VIRMAQ69YN4 1812 aaKnown RBP17.14■□□□□ 0.33
LINC01875-201ENST00000454477 PALLDQ8WX93 1383 aa17.14■□□□□ 0.33
LINC01875-201ENST00000454477 C5P01031 1676 aa17.13■□□□□ 0.33
LINC01875-201ENST00000454477 ARFGEF1Q9Y6D6 1849 aa17.13■□□□□ 0.33
LINC01875-201ENST00000454477 RALBP1Q15311 655 aa17.13■□□□□ 0.33
LINC01875-201ENST00000454477 N4BP2Q86UW6 1770 aaPredicted RBP17.12■□□□□ 0.33
LINC01875-201ENST00000454477 BRCA1P38398 1863 aaKnown RBP17.12■□□□□ 0.33
LINC01875-201ENST00000454477 FCHSD2O94868 740 aa17.12■□□□□ 0.33
LINC01875-201ENST00000454477 HMOX1P09601 288 aa17.12■□□□□ 0.33
LINC01875-201ENST00000454477 GAS2L2Q8NHY3 880 aa17.12■□□□□ 0.33
LINC01875-201ENST00000454477 RGPD2P0DJD1 1756 aa17.11■□□□□ 0.33
LINC01875-201ENST00000454477 NEFMP07197 916 aa17.11■□□□□ 0.33
LINC01875-201ENST00000454477 CFAP44Q96MT7 982 aa17.11■□□□□ 0.33
LINC01875-201ENST00000454477 LOC102724428A0A0B4J2F2 783 aa17.1■□□□□ 0.33
LINC01875-201ENST00000454477 VEGFBP49765 207 aa17.1■□□□□ 0.33
LINC01875-201ENST00000454477 SIK1P57059 783 aa17.1■□□□□ 0.33
LINC01875-201ENST00000454477 PNNQ9H307 717 aaKnown RBP17.1■□□□□ 0.33
LINC01875-201ENST00000454477 ZNF316A6NFI3 1004 aaPredicted RBP17.09■□□□□ 0.33
LINC01875-201ENST00000454477 A0A0G2JLW4 131 aa17.08■□□□□ 0.32
LINC01875-201ENST00000454477 U2AF1L5P0DN76 240 aaPredicted RBP17.08■□□□□ 0.32
LINC01875-201ENST00000454477 U2AF1Q01081 240 aaKnown RBP eCLIP17.08■□□□□ 0.32
LINC01875-201ENST00000454477 DDX10Q13206 875 aaKnown RBP17.08■□□□□ 0.32
LINC01875-201ENST00000454477 AK7Q96M32 723 aa17.08■□□□□ 0.32
LINC01875-201ENST00000454477 ATG3Q9NT62 314 aa17.08■□□□□ 0.32
LINC01875-201ENST00000454477 DOT1LQ8TEK3 1739 aa17.07■□□□□ 0.32
LINC01875-201ENST00000454477 TOGARAM1Q9Y4F4 1720 aa17.07■□□□□ 0.32
LINC01875-201ENST00000454477 GLTPD2A6NH11 291 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms