RNA–Protein interactions for RNA: ENST00000454132.5

LMBR1-213, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 2,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-213ENST00000454132 TCHHQ07283 1943 aa23.74■■□□□ 1.39
LMBR1-213ENST00000454132 PNMA6EA0A0J9YXQ4 647 aa23.74■■□□□ 1.39
LMBR1-213ENST00000454132 COG3Q96JB2 828 aa23.74■■□□□ 1.39
LMBR1-213ENST00000454132 SRCIN1Q9C0H9 1055 aa23.74■■□□□ 1.39
LMBR1-213ENST00000454132 CHMP3Q9Y3E7 222 aa23.74■■□□□ 1.39
LMBR1-213ENST00000454132 IGSF3O75054 1194 aa23.73■■□□□ 1.39
LMBR1-213ENST00000454132 CPA1P15085 419 aa23.73■■□□□ 1.39
LMBR1-213ENST00000454132 FRMPD1Q5SYB0 1578 aa23.73■■□□□ 1.39
LMBR1-213ENST00000454132 HMMRO75330 724 aa23.73■■□□□ 1.39
LMBR1-213ENST00000454132 MCCP23508 829 aa23.73■■□□□ 1.39
LMBR1-213ENST00000454132 CHMLP26374 656 aa23.73■■□□□ 1.39
LMBR1-213ENST00000454132 GIMAP6Q6P9H5 292 aa23.73■■□□□ 1.39
LMBR1-213ENST00000454132 CUL4AQ13619 759 aa23.72■■□□□ 1.39
LMBR1-213ENST00000454132 CCDC94Q9BW85 323 aaPredicted RBP23.72■■□□□ 1.39
LMBR1-213ENST00000454132 DDX54Q8TDD1 881 aaKnown RBP23.72■■□□□ 1.39
LMBR1-213ENST00000454132 MX1P20591 662 aa23.71■■□□□ 1.39
LMBR1-213ENST00000454132 NUTM1Q86Y26 1132 aa23.71■■□□□ 1.39
LMBR1-213ENST00000454132 A0A0U1RQG5 324 aaPredicted RBP23.71■■□□□ 1.39
LMBR1-213ENST00000454132 PPP4R3BQ5MIZ7 849 aa23.71■■□□□ 1.39
LMBR1-213ENST00000454132 DLG5Q8TDM6 1919 aa23.71■■□□□ 1.39
LMBR1-213ENST00000454132 ATP2B3Q16720 1220 aa23.7■■□□□ 1.38
LMBR1-213ENST00000454132 SMAP1Q8IYB5 467 aaPredicted RBP23.7■■□□□ 1.38
LMBR1-213ENST00000454132 PIBF1Q8WXW3 757 aa23.7■■□□□ 1.38
LMBR1-213ENST00000454132 LRRCC1Q9C099 1032 aa23.69■■□□□ 1.38
LMBR1-213ENST00000454132 ANKRD26Q9UPS8 1709 aa23.69■■□□□ 1.38
LMBR1-213ENST00000454132 CHL1O00533 1208 aa23.69■■□□□ 1.38
LMBR1-213ENST00000454132 EIF4A2Q14240 407 aaKnown RBP23.68■■□□□ 1.38
LMBR1-213ENST00000454132 AP5Z1O43299 807 aa23.68■■□□□ 1.38
LMBR1-213ENST00000454132 TXNDC2Q86VQ3 553 aa23.68■■□□□ 1.38
LMBR1-213ENST00000454132 MTERF4Q7Z6M4 381 aaKnown RBP23.67■■□□□ 1.38
LMBR1-213ENST00000454132 MYO5BQ9ULV0 1848 aa23.67■■□□□ 1.38
LMBR1-213ENST00000454132 PHF14O94880 888 aa23.66■■□□□ 1.38
LMBR1-213ENST00000454132 GNAI2P04899 355 aa23.66■■□□□ 1.38
LMBR1-213ENST00000454132 HSP90AB2PQ58FF8 381 aa23.66■■□□□ 1.38
LMBR1-213ENST00000454132 PYCARDQ9ULZ3 195 aa23.66■■□□□ 1.38
LMBR1-213ENST00000454132 REREQ9P2R6 1566 aa23.66■■□□□ 1.38
LMBR1-213ENST00000454132 MCM2P49736 904 aa23.66■■□□□ 1.38
LMBR1-213ENST00000454132 KIF20BQ96Q89 1820 aa23.65■■□□□ 1.38
LMBR1-213ENST00000454132 WDR33Q9C0J8 1336 aaKnown RBP23.65■■□□□ 1.38
LMBR1-213ENST00000454132 TSPYL4Q9UJ04 414 aa23.65■■□□□ 1.38
LMBR1-213ENST00000454132 KIF24Q5T7B8 1368 aa23.65■■□□□ 1.38
LMBR1-213ENST00000454132 OSBPL3Q9H4L5 887 aa23.65■■□□□ 1.38
LMBR1-213ENST00000454132 BCL2L12Q9HB09 334 aa23.65■■□□□ 1.38
LMBR1-213ENST00000454132 PIK3C2BO00750 1634 aa23.65■■□□□ 1.38
LMBR1-213ENST00000454132 ZSCAN20P17040 1043 aaPredicted RBP23.64■■□□□ 1.38
LMBR1-213ENST00000454132 FKBP5Q13451 457 aaPredicted RBP23.64■■□□□ 1.38
LMBR1-213ENST00000454132 CCDC183Q5T5S1 534 aa23.64■■□□□ 1.38
LMBR1-213ENST00000454132 SLC52A1Q9NWF4 448 aa23.64■■□□□ 1.38
LMBR1-213ENST00000454132 YEATS2Q9ULM3 1422 aa23.64■■□□□ 1.37
LMBR1-213ENST00000454132 HECW2Q9P2P5 1572 aa23.64■■□□□ 1.37
LMBR1-213ENST00000454132 KIF3AQ9Y496 699 aa23.63■■□□□ 1.37
LMBR1-213ENST00000454132 CDC42BPGQ6DT37 1551 aa23.63■■□□□ 1.37
LMBR1-213ENST00000454132 NPM1P06748 294 aaKnown RBP eCLIP23.63■■□□□ 1.37
LMBR1-213ENST00000454132 INTS4Q96HW7 963 aaKnown RBP23.63■■□□□ 1.37
LMBR1-213ENST00000454132 LRRFIP2Q9Y608 721 aaKnown RBP23.63■■□□□ 1.37
LMBR1-213ENST00000454132 PTPRCP08575 1304 aa23.63■■□□□ 1.37
LMBR1-213ENST00000454132 SPG7Q9UQ90 795 aa23.62■■□□□ 1.37
LMBR1-213ENST00000454132 RPAP1Q9BWH6 1393 aaPredicted RBP23.62■■□□□ 1.37
LMBR1-213ENST00000454132 RASEFQ8IZ41 740 aa23.62■■□□□ 1.37
LMBR1-213ENST00000454132 NUDT16Q96DE0 195 aaKnown RBP23.62■■□□□ 1.37
LMBR1-213ENST00000454132 SYT1P21579 422 aa23.61■■□□□ 1.37
LMBR1-213ENST00000454132 KDM4AO75164 1064 aa23.61■■□□□ 1.37
LMBR1-213ENST00000454132 LARGE1O95461 756 aa23.61■■□□□ 1.37
LMBR1-213ENST00000454132 AK2P54819 239 aa23.61■■□□□ 1.37
LMBR1-213ENST00000454132 DNM1Q05193 864 aaKnown RBP23.61■■□□□ 1.37
LMBR1-213ENST00000454132 KCNF1Q9H3M0 494 aa23.61■■□□□ 1.37
LMBR1-213ENST00000454132 U2AF2P26368 475 aaKnown RBP eCLIP23.6■■□□□ 1.372e-6■■■■□ 20.4
LMBR1-213ENST00000454132 CAMK4Q16566 473 aa23.6■■□□□ 1.37
LMBR1-213ENST00000454132 RIOK3O14730 519 aaKnown RBP23.6■■□□□ 1.37
LMBR1-213ENST00000454132 PODXL2Q9NZ53 605 aa23.6■■□□□ 1.37
LMBR1-213ENST00000454132 ZSCAN22P10073 491 aaPredicted RBP23.59■■□□□ 1.37
LMBR1-213ENST00000454132 PRIMPOLQ96LW4 560 aa23.59■■□□□ 1.37
LMBR1-213ENST00000454132 SALL3Q9BXA9 1300 aa23.59■■□□□ 1.37
LMBR1-213ENST00000454132 WASLO00401 505 aaPredicted RBP23.59■■□□□ 1.37
LMBR1-213ENST00000454132 STX6O43752 255 aa23.59■■□□□ 1.37
LMBR1-213ENST00000454132 CCDC83Q8IWF9 413 aa23.59■■□□□ 1.37
LMBR1-213ENST00000454132 DMTNQ08495 405 aa23.58■■□□□ 1.37
LMBR1-213ENST00000454132 FAM173BQ6P4H8 233 aa23.58■■□□□ 1.37
LMBR1-213ENST00000454132 CWC27Q6UX04 472 aaKnown RBP23.58■■□□□ 1.37
LMBR1-213ENST00000454132 VPS37CA5D8V6 355 aaPredicted RBP23.57■■□□□ 1.36
LMBR1-213ENST00000454132 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.57■■□□□ 1.36
LMBR1-213ENST00000454132 CCT4P50991 539 aaKnown RBP23.57■■□□□ 1.36
LMBR1-213ENST00000454132 RUFY3Q7L099 469 aa23.57■■□□□ 1.36
LMBR1-213ENST00000454132 FAM184AQ8NB25 1140 aa23.57■■□□□ 1.36
LMBR1-213ENST00000454132 SMC3Q9UQE7 1217 aa23.57■■□□□ 1.36
LMBR1-213ENST00000454132 CPS1P31327 1500 aa23.57■■□□□ 1.36
LMBR1-213ENST00000454132 HMGN5P82970 282 aaKnown RBP23.56■■□□□ 1.36
LMBR1-213ENST00000454132 FERMT3Q86UX7 667 aa23.56■■□□□ 1.36
LMBR1-213ENST00000454132 SNX14Q9Y5W7 946 aa23.56■■□□□ 1.36
LMBR1-213ENST00000454132 ANAPC15P60006 121 aa23.56■■□□□ 1.36
LMBR1-213ENST00000454132 UVSSAQ2YD98 709 aa23.56■■□□□ 1.36
LMBR1-213ENST00000454132 PDCL2Q8N4E4 241 aa23.56■■□□□ 1.36
LMBR1-213ENST00000454132 RTF1Q92541 710 aaKnown RBP23.56■■□□□ 1.36
LMBR1-213ENST00000454132 MTHFSDQ2M296 383 aaKnown RBP23.55■■□□□ 1.36
LMBR1-213ENST00000454132 STK31Q9BXU1 1019 aa23.55■■□□□ 1.36
LMBR1-213ENST00000454132 HSPA4P34932 840 aa23.55■■□□□ 1.36
LMBR1-213ENST00000454132 UBE2HP62256 183 aa23.55■■□□□ 1.36
LMBR1-213ENST00000454132 SURF6O75683 361 aaKnown RBP23.54■■□□□ 1.36
LMBR1-213ENST00000454132 HAP1P54257 671 aaPredicted RBP23.54■■□□□ 1.36
LMBR1-213ENST00000454132 FLIIQ13045 1269 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms