RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 PHF23Q9BUL5 403 aaPredicted RBP14.13□□□□□ -0.15
SEC16A-207ENST00000453963 GBP3Q9H0R5 595 aa14.13□□□□□ -0.15
SEC16A-207ENST00000453963 KDM4AO75164 1064 aa14.13□□□□□ -0.15
SEC16A-207ENST00000453963 XRCC6P12956 609 aaKnown RBP eCLIP14.13□□□□□ -0.154e-7■□□□□ 8.4
SEC16A-207ENST00000453963 CNKSR2Q8WXI2 1034 aa14.13□□□□□ -0.15
SEC16A-207ENST00000453963 GNL3LQ9NVN8 582 aaKnown RBP14.13□□□□□ -0.15
SEC16A-207ENST00000453963 GOLGA6L10A6NI86 522 aa14.13□□□□□ -0.15
SEC16A-207ENST00000453963 TTC39AQ5SRH9 613 aa14.13□□□□□ -0.15
SEC16A-207ENST00000453963 ZSCAN12O43309 604 aa14.12□□□□□ -0.15
SEC16A-207ENST00000453963 ZFYVE27Q5T4F4 411 aa14.12□□□□□ -0.15
SEC16A-207ENST00000453963 IQCEQ6IPM2 695 aa14.12□□□□□ -0.15
SEC16A-207ENST00000453963 TBC1D9Q6ZT07 1266 aa14.12□□□□□ -0.15
SEC16A-207ENST00000453963 FERMT3Q86UX7 667 aa14.12□□□□□ -0.15
SEC16A-207ENST00000453963 CDK5RAP3Q96JB5 506 aa14.12□□□□□ -0.15
SEC16A-207ENST00000453963 SIL1Q9H173 461 aa14.12□□□□□ -0.15
SEC16A-207ENST00000453963 LIMCH1Q9UPQ0 1083 aa14.12□□□□□ -0.15
SEC16A-207ENST00000453963 CTAGE5O15320 804 aa14.12□□□□□ -0.15
SEC16A-207ENST00000453963 MYL6BP14649 208 aa14.12□□□□□ -0.15
SEC16A-207ENST00000453963 CAMK4Q16566 473 aa14.12□□□□□ -0.15
SEC16A-207ENST00000453963 CFAP100Q494V2 611 aa14.11□□□□□ -0.15
SEC16A-207ENST00000453963 FBXO31Q5XUX0 539 aaPredicted RBP14.11□□□□□ -0.15
SEC16A-207ENST00000453963 DDX19AQ9NUU7 478 aaKnown RBP14.11□□□□□ -0.15
SEC16A-207ENST00000453963 PODXL2Q9NZ53 605 aa14.11□□□□□ -0.15
SEC16A-207ENST00000453963 ERICH4A6NGS2 130 aa14.11□□□□□ -0.15
SEC16A-207ENST00000453963 TNNT1P13805 278 aa14.11□□□□□ -0.15
SEC16A-207ENST00000453963 HDAC1Q13547 482 aaPredicted RBP14.11□□□□□ -0.15
SEC16A-207ENST00000453963 CCDC181Q5TID7 509 aa14.11□□□□□ -0.15
SEC16A-207ENST00000453963 ZSCAN25Q6NSZ9 544 aa14.11□□□□□ -0.15
SEC16A-207ENST00000453963 NACAP1Q9BZK3 213 aa14.11□□□□□ -0.15
SEC16A-207ENST00000453963 BTBD11A6QL63 1104 aa14.11□□□□□ -0.15
SEC16A-207ENST00000453963 CCAR1Q8IX12 1150 aaKnown RBP14.11□□□□□ -0.15
SEC16A-207ENST00000453963 SMARCA5O60264 1052 aaPredicted RBP14.11□□□□□ -0.15
SEC16A-207ENST00000453963 ERLIN2O94905 339 aa14.11□□□□□ -0.15
SEC16A-207ENST00000453963 HSP90AB2PQ58FF8 381 aa14.11□□□□□ -0.15
SEC16A-207ENST00000453963 NUTM1Q86Y26 1132 aa14.11□□□□□ -0.15
SEC16A-207ENST00000453963 CALCOCO1Q9P1Z2 691 aa14.1□□□□□ -0.15
SEC16A-207ENST00000453963 ARHGAP29Q52LW3 1261 aa14.1□□□□□ -0.15
SEC16A-207ENST00000453963 PRDM10Q9NQV6 1147 aa14.1□□□□□ -0.15
SEC16A-207ENST00000453963 CLIP2Q9UDT6 1046 aa14.1□□□□□ -0.15
SEC16A-207ENST00000453963 NOL7Q9UMY1 257 aaKnown RBP14.1□□□□□ -0.15
SEC16A-207ENST00000453963 ADGRF5Q8IZF2 1346 aa14.1□□□□□ -0.15
SEC16A-207ENST00000453963 URB2Q14146 1524 aaKnown RBP14.1□□□□□ -0.15
SEC16A-207ENST00000453963 EPB41L2O43491 1005 aaKnown RBP14.1□□□□□ -0.15
SEC16A-207ENST00000453963 C8orf34Q49A92 452 aa14.1□□□□□ -0.15
SEC16A-207ENST00000453963 CCDC102AQ96A19 550 aa14.1□□□□□ -0.15
SEC16A-207ENST00000453963 GNAT3A8MTJ3 354 aa14.09□□□□□ -0.15
SEC16A-207ENST00000453963 ADCY5O95622 1261 aa14.09□□□□□ -0.15
SEC16A-207ENST00000453963 PRPF40BQ6NWY9 871 aaKnown RBP14.09□□□□□ -0.15
SEC16A-207ENST00000453963 DEF6Q9H4E7 631 aa14.09□□□□□ -0.15
SEC16A-207ENST00000453963 KIF14Q15058 1648 aa14.09□□□□□ -0.15
SEC16A-207ENST00000453963 CCDC69A6NI79 296 aa14.09□□□□□ -0.15
SEC16A-207ENST00000453963 CAVIN2O95810 425 aa14.09□□□□□ -0.15
SEC16A-207ENST00000453963 THUMPD2Q9BTF0 503 aaKnown RBP14.09□□□□□ -0.15
SEC16A-207ENST00000453963 AMOTL2Q9Y2J4 779 aa14.09□□□□□ -0.15
SEC16A-207ENST00000453963 CCDC57Q2TAC2 916 aa14.09□□□□□ -0.15
SEC16A-207ENST00000453963 LRSAM1Q6UWE0 723 aa14.09□□□□□ -0.15
SEC16A-207ENST00000453963 ZSCAN23Q3MJ62 389 aa14.08□□□□□ -0.15
SEC16A-207ENST00000453963 SNX21Q969T3 373 aa14.08□□□□□ -0.15
SEC16A-207ENST00000453963 DDX11Q96FC9 970 aa14.08□□□□□ -0.15
SEC16A-207ENST00000453963 MPHOSPH8Q99549 860 aa14.08□□□□□ -0.15
SEC16A-207ENST00000453963 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.08□□□□□ -0.154e-7■■■■■ 60.7
SEC16A-207ENST00000453963 ZNF608Q9ULD9 1512 aaPredicted RBP14.08□□□□□ -0.15
SEC16A-207ENST00000453963 IL16Q14005 1332 aa14.08□□□□□ -0.16
SEC16A-207ENST00000453963 GSDMDP57764 484 aa14.08□□□□□ -0.16
SEC16A-207ENST00000453963 WASF1Q92558 559 aa14.08□□□□□ -0.16
SEC16A-207ENST00000453963 PHF8Q9UPP1 1060 aa14.08□□□□□ -0.16
SEC16A-207ENST00000453963 KRT18P05783 430 aaKnown RBP14.08□□□□□ -0.16
SEC16A-207ENST00000453963 FOXO3O43524 673 aa14.07□□□□□ -0.16
SEC16A-207ENST00000453963 CEBPAP49715 358 aaPredicted RBP14.07□□□□□ -0.16
SEC16A-207ENST00000453963 SKIDA1Q1XH10 827 aa14.07□□□□□ -0.16
SEC16A-207ENST00000453963 NME9Q86XW9 330 aa14.07□□□□□ -0.16
SEC16A-207ENST00000453963 MAPKBP1O60336 1514 aa14.07□□□□□ -0.16
SEC16A-207ENST00000453963 UBE2HP62256 183 aa14.07□□□□□ -0.16
SEC16A-207ENST00000453963 PIP4K2BP78356 416 aa14.07□□□□□ -0.16
SEC16A-207ENST00000453963 CEP126Q9P2H0 1117 aa14.07□□□□□ -0.16
SEC16A-207ENST00000453963 DENND4BO75064 1496 aaPredicted RBP14.07□□□□□ -0.16
SEC16A-207ENST00000453963 WASLO00401 505 aaPredicted RBP14.07□□□□□ -0.16
SEC16A-207ENST00000453963 GOLGA6L7A0A1B0GV03 622 aa14.06□□□□□ -0.16
SEC16A-207ENST00000453963 STX6O43752 255 aa14.06□□□□□ -0.16
SEC16A-207ENST00000453963 ZMYND15Q9H091 742 aa14.06□□□□□ -0.16
SEC16A-207ENST00000453963 U3KPZ7 1027 aaPredicted RBP14.06□□□□□ -0.16
SEC16A-207ENST00000453963 PTPRCP08575 1304 aa14.06□□□□□ -0.16
SEC16A-207ENST00000453963 URI1O94763 535 aaPredicted RBP14.06□□□□□ -0.16
SEC16A-207ENST00000453963 NUCB1Q02818 461 aa14.06□□□□□ -0.16
SEC16A-207ENST00000453963 C16orf45Q96MC5 204 aaPredicted RBP14.06□□□□□ -0.16
SEC16A-207ENST00000453963 NSD2O96028 1365 aa14.06□□□□□ -0.16
SEC16A-207ENST00000453963 PPP4R3BQ5MIZ7 849 aa14.06□□□□□ -0.16
SEC16A-207ENST00000453963 SYCP1Q15431 976 aa14.06□□□□□ -0.16
SEC16A-207ENST00000453963 HS1BP3Q53T59 392 aa14.06□□□□□ -0.16
SEC16A-207ENST00000453963 TTC22Q5TAA0 569 aa14.06□□□□□ -0.16
SEC16A-207ENST00000453963 CCDC148Q8NFR7 591 aa14.06□□□□□ -0.16
SEC16A-207ENST00000453963 SF3B2Q13435 895 aaKnown RBP14.05□□□□□ -0.16
SEC16A-207ENST00000453963 CRACR2AQ9BSW2 395 aa14.05□□□□□ -0.16
SEC16A-207ENST00000453963 HMGB1P09429 215 aaKnown RBP14.05□□□□□ -0.16
SEC16A-207ENST00000453963 FANCAO15360 1455 aa14.05□□□□□ -0.16
SEC16A-207ENST00000453963 IMMTQ16891 758 aaKnown RBP14.05□□□□□ -0.16
SEC16A-207ENST00000453963 PAXBP1Q9Y5B6 917 aa14.05□□□□□ -0.16
SEC16A-207ENST00000453963 SCAF11Q99590 1463 aaKnown RBP14.05□□□□□ -0.16
SEC16A-207ENST00000453963 MCM10Q7L590 875 aa14.04□□□□□ -0.16
SEC16A-207ENST00000453963 PANK2Q9BZ23 570 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms