RNA–Protein interactions for RNA: ENST00000453466.1

PMPCB-205, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 1,509 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-205ENST00000453466 RREB1Q92766 1687 aa26.4■■□□□ 1.82
PMPCB-205ENST00000453466 ITGB4P16144 1822 aa26.4■■□□□ 1.82
PMPCB-205ENST00000453466 HTATSF1O43719 755 aaKnown RBP26.39■■□□□ 1.82
PMPCB-205ENST00000453466 R3HDM1Q15032 1099 aaKnown RBP26.39■■□□□ 1.82
PMPCB-205ENST00000453466 TEFQ10587 303 aa26.39■■□□□ 1.81
PMPCB-205ENST00000453466 STK32BQ9NY57 414 aa26.39■■□□□ 1.81
PMPCB-205ENST00000453466 PSDA5PKW4 1024 aaPredicted RBP26.38■■□□□ 1.81
PMPCB-205ENST00000453466 CENPBP07199 599 aaPredicted RBP26.38■■□□□ 1.81
PMPCB-205ENST00000453466 KCNQ4P56696 695 aa26.38■■□□□ 1.81
PMPCB-205ENST00000453466 NFE2L2Q16236 605 aa26.38■■□□□ 1.81
PMPCB-205ENST00000453466 LOC102724428A0A0B4J2F2 783 aa26.36■■□□□ 1.81
PMPCB-205ENST00000453466 SIK1P57059 783 aa26.36■■□□□ 1.81
PMPCB-205ENST00000453466 RUNDC1Q96C34 613 aa26.36■■□□□ 1.81
PMPCB-205ENST00000453466 SLC15A2Q16348 729 aa26.35■■□□□ 1.81
PMPCB-205ENST00000453466 ANO8Q9HCE9 1232 aaPredicted RBP26.35■■□□□ 1.81
PMPCB-205ENST00000453466 NUP188Q5SRE5 1749 aa26.35■■□□□ 1.81
PMPCB-205ENST00000453466 CCDC146Q8IYE0 955 aa26.34■■□□□ 1.81
PMPCB-205ENST00000453466 RBM42Q9BTD8 480 aaKnown RBP26.34■■□□□ 1.81
PMPCB-205ENST00000453466 SCN11AQ9UI33 1791 aa26.33■■□□□ 1.81
PMPCB-205ENST00000453466 CEMIPQ8WUJ3 1361 aa26.33■■□□□ 1.81
PMPCB-205ENST00000453466 ATP6V1AP38606 617 aa26.33■■□□□ 1.81
PMPCB-205ENST00000453466 MCM10Q7L590 875 aa26.33■■□□□ 1.81
PMPCB-205ENST00000453466 PTCD1O75127 700 aaKnown RBP26.31■■□□□ 1.8
PMPCB-205ENST00000453466 RIPK4P57078 832 aa26.31■■□□□ 1.8
PMPCB-205ENST00000453466 HNRNPUQ00839 825 aaKnown RBP eCLIP26.31■■□□□ 1.8
PMPCB-205ENST00000453466 LY75O60449 1722 aa26.31■■□□□ 1.8
PMPCB-205ENST00000453466 MRC1P22897 1456 aa26.31■■□□□ 1.8
PMPCB-205ENST00000453466 TMPOP42166 694 aaKnown RBP26.3■■□□□ 1.8
PMPCB-205ENST00000453466 DCTN1Q14203 1278 aa26.3■■□□□ 1.8
PMPCB-205ENST00000453466 ADAMTS7Q9UKP4 1686 aa26.3■■□□□ 1.8
PMPCB-205ENST00000453466 SLC39A6Q13433 755 aa26.29■■□□□ 1.8
PMPCB-205ENST00000453466 AKT1S1Q96B36 256 aa26.29■■□□□ 1.8
PMPCB-205ENST00000453466 ZNF827Q17R98 1081 aa26.28■■□□□ 1.8
PMPCB-205ENST00000453466 TTC5Q8N0Z6 440 aa26.28■■□□□ 1.8
PMPCB-205ENST00000453466 TFCP2L1Q9NZI6 479 aa26.28■■□□□ 1.8
PMPCB-205ENST00000453466 BTBD11A6QL63 1104 aa26.27■■□□□ 1.8
PMPCB-205ENST00000453466 LMOD3Q0VAK6 560 aa26.27■■□□□ 1.8
PMPCB-205ENST00000453466 NEUROD2Q15784 382 aa26.26■■□□□ 1.79
PMPCB-205ENST00000453466 ITPK1Q13572 414 aa26.25■■□□□ 1.79
PMPCB-205ENST00000453466 TAF7Q15545 349 aaPredicted RBP26.25■■□□□ 1.79
PMPCB-205ENST00000453466 SLC4A9Q96Q91 983 aa26.25■■□□□ 1.79
PMPCB-205ENST00000453466 RRP7AQ9Y3A4 280 aaKnown RBP26.25■■□□□ 1.79
PMPCB-205ENST00000453466 ZNF790Q6PG37 636 aa26.24■■□□□ 1.79
PMPCB-205ENST00000453466 LINC00116Q8NCU8 138 aa26.24■■□□□ 1.79
PMPCB-205ENST00000453466 AK7Q96M32 723 aa26.23■■□□□ 1.79
PMPCB-205ENST00000453466 ZBED9Q6R2W3 1325 aa26.23■■□□□ 1.79
PMPCB-205ENST00000453466 PAPPAQ13219 1627 aa26.23■■□□□ 1.79
PMPCB-205ENST00000453466 APAF1O14727 1248 aa26.21■■□□□ 1.79
PMPCB-205ENST00000453466 VSIG10Q8N0Z9 540 aa26.2■■□□□ 1.79
PMPCB-205ENST00000453466 THUMPD2Q9BTF0 503 aaKnown RBP26.2■■□□□ 1.79
PMPCB-205ENST00000453466 FLAD1Q8NFF5 587 aa26.19■■□□□ 1.78
PMPCB-205ENST00000453466 FMNL2Q96PY5 1086 aa26.19■■□□□ 1.78
PMPCB-205ENST00000453466 VIRMAQ69YN4 1812 aaKnown RBP26.18■■□□□ 1.78
PMPCB-205ENST00000453466 RC3H1Q5TC82 1133 aaKnown RBP26.18■■□□□ 1.78
PMPCB-205ENST00000453466 ZNF496Q96IT1 587 aaPredicted RBP26.18■■□□□ 1.78
PMPCB-205ENST00000453466 PNPLA7Q6ZV29 1317 aa26.17■■□□□ 1.78
PMPCB-205ENST00000453466 PDGFDQ9GZP0 370 aaPredicted RBP26.17■■□□□ 1.78
PMPCB-205ENST00000453466 TRIM35Q9UPQ4 493 aa26.17■■□□□ 1.78
PMPCB-205ENST00000453466 KCNQ3O43525 872 aa26.16■■□□□ 1.78
PMPCB-205ENST00000453466 DNAJC10Q8IXB1 793 aa26.16■■□□□ 1.78
PMPCB-205ENST00000453466 TEX13AQ9BXU3 409 aaPredicted RBP26.16■■□□□ 1.78
PMPCB-205ENST00000453466 MIS18AQ9NYP9 233 aa26.16■■□□□ 1.78
PMPCB-205ENST00000453466 C5P01031 1676 aa26.16■■□□□ 1.78
PMPCB-205ENST00000453466 GNPATO15228 680 aa26.15■■□□□ 1.78
PMPCB-205ENST00000453466 CNTNAP4Q9C0A0 1308 aa26.15■■□□□ 1.78
PMPCB-205ENST00000453466 MSH5O43196 834 aa26.14■■□□□ 1.78
PMPCB-205ENST00000453466 SLC16A10Q8TF71 515 aa26.14■■□□□ 1.78
PMPCB-205ENST00000453466 DLG5Q8TDM6 1919 aa26.14■■□□□ 1.77
PMPCB-205ENST00000453466 ZNF831Q5JPB2 1677 aa26.14■■□□□ 1.77
PMPCB-205ENST00000453466 KCPQ6ZWJ8 1503 aa26.14■■□□□ 1.77
PMPCB-205ENST00000453466 RTCBQ9Y3I0 505 aaKnown RBP26.14■■□□□ 1.77
PMPCB-205ENST00000453466 HEG1Q9ULI3 1381 aa26.13■■□□□ 1.77
PMPCB-205ENST00000453466 C4BP0C0L5 1744 aa26.13■■□□□ 1.77
PMPCB-205ENST00000453466 STARD3NLO95772 234 aa26.13■■□□□ 1.77
PMPCB-205ENST00000453466 SSFA2P28290 1259 aa26.13■■□□□ 1.77
PMPCB-205ENST00000453466 CRKLP46109 303 aaKnown RBP26.13■■□□□ 1.77
PMPCB-205ENST00000453466 COL23A1Q86Y22 540 aaPredicted RBP26.13■■□□□ 1.77
PMPCB-205ENST00000453466 NGEFQ8N5V2 710 aa26.13■■□□□ 1.77
PMPCB-205ENST00000453466 SPON1Q9HCB6 807 aa26.13■■□□□ 1.77
PMPCB-205ENST00000453466 BABAM1Q9NWV8 329 aa26.13■■□□□ 1.77
PMPCB-205ENST00000453466 ZBTB7AO95365 584 aa26.12■■□□□ 1.77
PMPCB-205ENST00000453466 SIPA1L3O60292 1781 aaPredicted RBP26.12■■□□□ 1.77
PMPCB-205ENST00000453466 TAF1LQ8IZX4 1826 aa26.12■■□□□ 1.77
PMPCB-205ENST00000453466 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.11■■□□□ 1.77
PMPCB-205ENST00000453466 RPS6KA4O75676 772 aa26.11■■□□□ 1.77
PMPCB-205ENST00000453466 PHF14O94880 888 aa26.11■■□□□ 1.77
PMPCB-205ENST00000453466 CYP19A1P11511 503 aaPredicted RBP26.11■■□□□ 1.77
PMPCB-205ENST00000453466 MTFR1LQ9H019 292 aa26.11■■□□□ 1.77
PMPCB-205ENST00000453466 CCDC87Q9NVE4 849 aa26.1■■□□□ 1.77
PMPCB-205ENST00000453466 TSPYL4Q9UJ04 414 aa26.1■■□□□ 1.77
PMPCB-205ENST00000453466 SNRPA1P09661 255 aaKnown RBP26.09■■□□□ 1.77
PMPCB-205ENST00000453466 TRAPPC3LQ5T215 181 aa26.09■■□□□ 1.77
PMPCB-205ENST00000453466 CALD1Q05682 793 aaKnown RBP26.09■■□□□ 1.77
PMPCB-205ENST00000453466 ATF5Q9Y2D1 282 aaPredicted RBP26.09■■□□□ 1.77
PMPCB-205ENST00000453466 NCBP3Q53F19 620 aaKnown RBP26.08■■□□□ 1.77
PMPCB-205ENST00000453466 INTS5Q6P9B9 1019 aaKnown RBP26.08■■□□□ 1.77
PMPCB-205ENST00000453466 AMIGO3Q86WK7 504 aa26.08■■□□□ 1.77
PMPCB-205ENST00000453466 ADRA2BP18089 450 aa26.07■■□□□ 1.76
PMPCB-205ENST00000453466 SMIM5Q71RC9 77 aa26.07■■□□□ 1.76
PMPCB-205ENST00000453466 LAS1LQ9Y4W2 734 aaKnown RBP26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms