RNA–Protein interactions for RNA: ENST00000453171.5

KRTCAP3-204, Transcript of keratinocyte associated protein 3, humanhuman

TSL 3

Gene KRTCAP3, Length 665 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3-204ENST00000453171 CCDC146Q8IYE0 955 aa15.78■□□□□ 0.12
KRTCAP3-204ENST00000453171 SLC52A2Q9HAB3 445 aa15.78■□□□□ 0.12
KRTCAP3-204ENST00000453171 C5P01031 1676 aa15.78■□□□□ 0.12
KRTCAP3-204ENST00000453171 DIEXFQ68CQ4 756 aaKnown RBP15.77■□□□□ 0.12
KRTCAP3-204ENST00000453171 NFATC2IPQ8NCF5 419 aa15.77■□□□□ 0.12
KRTCAP3-204ENST00000453171 SMARCC1Q92922 1105 aaPredicted RBP15.77■□□□□ 0.12
KRTCAP3-204ENST00000453171 RUNDC1Q96C34 613 aa15.77■□□□□ 0.12
KRTCAP3-204ENST00000453171 ATG3Q9NT62 314 aa15.77■□□□□ 0.12
KRTCAP3-204ENST00000453171 ASAP1Q9ULH1 1129 aa15.77■□□□□ 0.12
KRTCAP3-204ENST00000453171 CICQ96RK0 1608 aaPredicted RBP15.76■□□□□ 0.11
KRTCAP3-204ENST00000453171 HTATSF1O43719 755 aaKnown RBP15.76■□□□□ 0.11
KRTCAP3-204ENST00000453171 SLC27A3Q5K4L6 730 aa15.76■□□□□ 0.11
KRTCAP3-204ENST00000453171 LRRC4BQ9NT99 713 aa15.76■□□□□ 0.11
KRTCAP3-204ENST00000453171 TUBGCP6Q96RT7 1819 aa15.75■□□□□ 0.11
KRTCAP3-204ENST00000453171 COL5A3P25940 1745 aaPredicted RBP15.75■□□□□ 0.11
KRTCAP3-204ENST00000453171 TMPOP42166 694 aaKnown RBP15.75■□□□□ 0.11
KRTCAP3-204ENST00000453171 MCM10Q7L590 875 aa15.74■□□□□ 0.11
KRTCAP3-204ENST00000453171 RTF1Q92541 710 aaKnown RBP15.74■□□□□ 0.11
KRTCAP3-204ENST00000453171 ANO8Q9HCE9 1232 aaPredicted RBP15.74■□□□□ 0.11
KRTCAP3-204ENST00000453171 TJP1Q07157 1748 aa15.74■□□□□ 0.11
KRTCAP3-204ENST00000453171 QSER1Q2KHR3 1735 aa15.74■□□□□ 0.11
KRTCAP3-204ENST00000453171 KCPQ6ZWJ8 1503 aa15.73■□□□□ 0.11
KRTCAP3-204ENST00000453171 KDM3BQ7LBC6 1761 aa15.73■□□□□ 0.11
KRTCAP3-204ENST00000453171 KCNQ4P56696 695 aa15.73■□□□□ 0.11
KRTCAP3-204ENST00000453171 TEFQ10587 303 aa15.73■□□□□ 0.11
KRTCAP3-204ENST00000453171 DCTN1Q14203 1278 aa15.73■□□□□ 0.11
KRTCAP3-204ENST00000453171 CCNL1Q9UK58 526 aaPredicted RBP15.73■□□□□ 0.11
KRTCAP3-204ENST00000453171 C4BP0C0L5 1744 aa15.72■□□□□ 0.11
KRTCAP3-204ENST00000453171 LOC102724428A0A0B4J2F2 783 aa15.72■□□□□ 0.11
KRTCAP3-204ENST00000453171 SIK1P57059 783 aa15.72■□□□□ 0.11
KRTCAP3-204ENST00000453171 CCER2I3L3R5 266 aa15.71■□□□□ 0.11
KRTCAP3-204ENST00000453171 RIPK4P57078 832 aa15.71■□□□□ 0.11
KRTCAP3-204ENST00000453171 RRP7AQ9Y3A4 280 aaKnown RBP15.71■□□□□ 0.11
KRTCAP3-204ENST00000453171 CASZ1Q86V15 1759 aa15.7■□□□□ 0.1
KRTCAP3-204ENST00000453171 UBR3Q6ZT12 1888 aa15.7■□□□□ 0.1
KRTCAP3-204ENST00000453171 MYH14Q7Z406 1995 aaKnown RBP15.7■□□□□ 0.1
KRTCAP3-204ENST00000453171 SLC39A6Q13433 755 aa15.7■□□□□ 0.1
KRTCAP3-204ENST00000453171 SLC4A9Q96Q91 983 aa15.7■□□□□ 0.1
KRTCAP3-204ENST00000453171 APAF1O14727 1248 aa15.69■□□□□ 0.1
KRTCAP3-204ENST00000453171 LMOD3Q0VAK6 560 aa15.69■□□□□ 0.1
KRTCAP3-204ENST00000453171 ITPK1Q13572 414 aa15.69■□□□□ 0.1
KRTCAP3-204ENST00000453171 NBPF14Q5TI25 921 aa15.69■□□□□ 0.1
KRTCAP3-204ENST00000453171 THUMPD2Q9BTF0 503 aaKnown RBP15.69■□□□□ 0.1
KRTCAP3-204ENST00000453171 TRIM35Q9UPQ4 493 aa15.69■□□□□ 0.1
KRTCAP3-204ENST00000453171 PTCD1O75127 700 aaKnown RBP15.68■□□□□ 0.1
KRTCAP3-204ENST00000453171 R3HDM1Q15032 1099 aaKnown RBP15.68■□□□□ 0.1
KRTCAP3-204ENST00000453171 SLC15A2Q16348 729 aa15.68■□□□□ 0.1
KRTCAP3-204ENST00000453171 ZNF827Q17R98 1081 aa15.68■□□□□ 0.1
KRTCAP3-204ENST00000453171 AKT1S1Q96B36 256 aa15.68■□□□□ 0.1
KRTCAP3-204ENST00000453171 RBM42Q9BTD8 480 aaKnown RBP15.68■□□□□ 0.1
KRTCAP3-204ENST00000453171 PSDA5PKW4 1024 aaPredicted RBP15.67■□□□□ 0.1
KRTCAP3-204ENST00000453171 BTBD11A6QL63 1104 aa15.67■□□□□ 0.1
KRTCAP3-204ENST00000453171 ATP6V1AP38606 617 aa15.67■□□□□ 0.1
KRTCAP3-204ENST00000453171 NEUROD2Q15784 382 aa15.67■□□□□ 0.1
KRTCAP3-204ENST00000453171 ZNF790Q6PG37 636 aa15.67■□□□□ 0.1
KRTCAP3-204ENST00000453171 MIER1Q8N108 512 aa15.67■□□□□ 0.1
KRTCAP3-204ENST00000453171 STK32BQ9NY57 414 aa15.67■□□□□ 0.1
KRTCAP3-204ENST00000453171 TAF7Q15545 349 aaPredicted RBP15.66■□□□□ 0.1
KRTCAP3-204ENST00000453171 FAM9BQ8IZU0 186 aa15.66■□□□□ 0.1
KRTCAP3-204ENST00000453171 LINC00116Q8NCU8 138 aa15.66■□□□□ 0.1
KRTCAP3-204ENST00000453171 KCNQ3O43525 872 aa15.65■□□□□ 0.1
KRTCAP3-204ENST00000453171 TTC5Q8N0Z6 440 aa15.65■□□□□ 0.1
KRTCAP3-204ENST00000453171 LAMB4A4D0S4 1761 aa15.64■□□□□ 0.1
KRTCAP3-204ENST00000453171 HMGB2P26583 209 aaKnown RBP15.64■□□□□ 0.09
KRTCAP3-204ENST00000453171 ZNF496Q96IT1 587 aaPredicted RBP15.64■□□□□ 0.09
KRTCAP3-204ENST00000453171 HEG1Q9ULI3 1381 aa15.63■□□□□ 0.09
KRTCAP3-204ENST00000453171 VSIG10Q8N0Z9 540 aa15.63■□□□□ 0.09
KRTCAP3-204ENST00000453171 NCBP3Q53F19 620 aaKnown RBP15.62■□□□□ 0.09
KRTCAP3-204ENST00000453171 DNAJC10Q8IXB1 793 aa15.62■□□□□ 0.09
KRTCAP3-204ENST00000453171 FMNL2Q96PY5 1086 aa15.62■□□□□ 0.09
KRTCAP3-204ENST00000453171 MIS18AQ9NYP9 233 aa15.62■□□□□ 0.09
KRTCAP3-204ENST00000453171 C4AP0C0L4 1744 aa15.62■□□□□ 0.09
KRTCAP3-204ENST00000453171 PNPLA7Q6ZV29 1317 aa15.62■□□□□ 0.09
KRTCAP3-204ENST00000453171 CNTNAP4Q9C0A0 1308 aa15.62■□□□□ 0.09
KRTCAP3-204ENST00000453171 CCDC27Q2M243 656 aa15.61■□□□□ 0.09
KRTCAP3-204ENST00000453171 AMIGO3Q86WK7 504 aa15.61■□□□□ 0.09
KRTCAP3-204ENST00000453171 PDGFDQ9GZP0 370 aaPredicted RBP15.61■□□□□ 0.09
KRTCAP3-204ENST00000453171 BABAM1Q9NWV8 329 aa15.61■□□□□ 0.09
KRTCAP3-204ENST00000453171 COL24A1Q17RW2 1714 aa15.6■□□□□ 0.09
KRTCAP3-204ENST00000453171 SENP3-EIF4A1A0A087X0R7 540 aa15.6■□□□□ 0.09
KRTCAP3-204ENST00000453171 RC3H1Q5TC82 1133 aaKnown RBP15.6■□□□□ 0.09
KRTCAP3-204ENST00000453171 AK7Q96M32 723 aa15.6■□□□□ 0.09
KRTCAP3-204ENST00000453171 TFCP2L1Q9NZI6 479 aa15.6■□□□□ 0.09
KRTCAP3-204ENST00000453171 LRP5O75197 1615 aa15.6■□□□□ 0.09
KRTCAP3-204ENST00000453171 CYP19A1P11511 503 aaPredicted RBP15.59■□□□□ 0.09
KRTCAP3-204ENST00000453171 TSPYL4Q9UJ04 414 aa15.59■□□□□ 0.09
KRTCAP3-204ENST00000453171 CHL1O00533 1208 aa15.58■□□□□ 0.08
KRTCAP3-204ENST00000453171 GNPATO15228 680 aa15.58■□□□□ 0.08
KRTCAP3-204ENST00000453171 CRKLP46109 303 aaKnown RBP15.58■□□□□ 0.08
KRTCAP3-204ENST00000453171 EIF4A1P60842 406 aaKnown RBP15.58■□□□□ 0.08
KRTCAP3-204ENST00000453171 INTS5Q6P9B9 1019 aaKnown RBP15.58■□□□□ 0.08
KRTCAP3-204ENST00000453171 WWC1Q8IX03 1113 aa15.58■□□□□ 0.08
KRTCAP3-204ENST00000453171 ZNF853P0CG23 659 aa15.57■□□□□ 0.08
KRTCAP3-204ENST00000453171 SSFA2P28290 1259 aa15.57■□□□□ 0.08
KRTCAP3-204ENST00000453171 CALD1Q05682 793 aaKnown RBP15.57■□□□□ 0.08
KRTCAP3-204ENST00000453171 CFAP44Q96MT7 982 aa15.57■□□□□ 0.08
KRTCAP3-204ENST00000453171 TEX13AQ9BXU3 409 aaPredicted RBP15.57■□□□□ 0.08
KRTCAP3-204ENST00000453171 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.56■□□□□ 0.08
KRTCAP3-204ENST00000453171 PRAMEF22A3QJZ6 481 aa15.56■□□□□ 0.08
KRTCAP3-204ENST00000453171 RPS6KA4O75676 772 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms