RNA–Protein interactions for RNA: ENST00000453040.5

CHL1-208, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 2

Gene CHL1, Length 3,960 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-208ENST00000453040 KIF3AQ9Y496 699 aa13.33□□□□□ -0.28
CHL1-208ENST00000453040 CYP2C19P33261 490 aa13.32□□□□□ -0.28
CHL1-208ENST00000453040 PLEKHM2Q8IWE5 1019 aa13.32□□□□□ -0.28
CHL1-208ENST00000453040 MRPL50Q8N5N7 158 aaKnown RBP13.32□□□□□ -0.28
CHL1-208ENST00000453040 POLKQ9UBT6 870 aa13.32□□□□□ -0.28
CHL1-208ENST00000453040 SMC4Q9NTJ3 1288 aa13.31□□□□□ -0.28
CHL1-208ENST00000453040 TMEM131LA2VDJ0 1609 aa13.31□□□□□ -0.28
CHL1-208ENST00000453040 ARHGAP45Q92619 1136 aa13.31□□□□□ -0.28
CHL1-208ENST00000453040 EFCC1Q9HA90 598 aa13.31□□□□□ -0.28
CHL1-208ENST00000453040 XRN1Q8IZH2 1706 aaKnown RBP13.3□□□□□ -0.28
CHL1-208ENST00000453040 VAMP4O75379 141 aa13.3□□□□□ -0.28
CHL1-208ENST00000453040 ITPRIPQ8IWB1 547 aa13.3□□□□□ -0.28
CHL1-208ENST00000453040 KIF24Q5T7B8 1368 aa13.3□□□□□ -0.28
CHL1-208ENST00000453040 CAVIN1Q6NZI2 390 aaKnown RBP13.3□□□□□ -0.28
CHL1-208ENST00000453040 LRSAM1Q6UWE0 723 aa13.3□□□□□ -0.28
CHL1-208ENST00000453040 FAM43BQ6ZT52 329 aaPredicted RBP13.3□□□□□ -0.28
CHL1-208ENST00000453040 ZNF771Q7L3S4 317 aaPredicted RBP13.3□□□□□ -0.28
CHL1-208ENST00000453040 GCC1Q96CN9 775 aa13.3□□□□□ -0.28
CHL1-208ENST00000453040 KIF1BPQ96EK5 621 aa13.3□□□□□ -0.28
CHL1-208ENST00000453040 PYCARDQ9ULZ3 195 aa13.3□□□□□ -0.28
CHL1-208ENST00000453040 AATKQ6ZMQ8 1374 aa13.3□□□□□ -0.28
CHL1-208ENST00000453040 TTC12Q9H892 705 aaPredicted RBP13.29□□□□□ -0.28
CHL1-208ENST00000453040 MON2Q7Z3U7 1717 aa13.29□□□□□ -0.28
CHL1-208ENST00000453040 ZGPATQ8N5A5 531 aaKnown RBP13.29□□□□□ -0.28
CHL1-208ENST00000453040 KIAA1524Q8TCG1 905 aa13.29□□□□□ -0.28
CHL1-208ENST00000453040 ZFYVE9O95405 1425 aa13.29□□□□□ -0.28
CHL1-208ENST00000453040 CCDC39Q9UFE4 941 aa13.29□□□□□ -0.28
CHL1-208ENST00000453040 KMT5BQ4FZB7 885 aa13.28□□□□□ -0.28
CHL1-208ENST00000453040 NUTM2FA1L443 756 aa13.28□□□□□ -0.28
CHL1-208ENST00000453040 MPNDQ8N594 471 aa13.28□□□□□ -0.28
CHL1-208ENST00000453040 SPAG9O60271 1321 aaKnown RBP13.28□□□□□ -0.28
CHL1-208ENST00000453040 SALL3Q9BXA9 1300 aa13.28□□□□□ -0.28
CHL1-208ENST00000453040 KIAA2012Q0VF49 1180 aa13.28□□□□□ -0.28
CHL1-208ENST00000453040 TRIM66O15016 1216 aa13.27□□□□□ -0.28
CHL1-208ENST00000453040 FOXD4L1Q9NU39 408 aa13.27□□□□□ -0.28
CHL1-208ENST00000453040 TRERF1Q96PN7 1200 aa13.27□□□□□ -0.29
CHL1-208ENST00000453040 C3P01024 1663 aa13.27□□□□□ -0.29
CHL1-208ENST00000453040 AKAP12Q02952 1782 aa13.27□□□□□ -0.29
CHL1-208ENST00000453040 CLGNO14967 610 aa13.27□□□□□ -0.29
CHL1-208ENST00000453040 TSPYL6Q8N831 410 aa13.27□□□□□ -0.29
CHL1-208ENST00000453040 EFCAB2Q5VUJ9 269 aa13.26□□□□□ -0.29
CHL1-208ENST00000453040 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.26□□□□□ -0.29
CHL1-208ENST00000453040 ATAD2Q6PL18 1390 aa13.26□□□□□ -0.29
CHL1-208ENST00000453040 FYB1O15117 783 aa13.25□□□□□ -0.29
CHL1-208ENST00000453040 UBXN6Q9BZV1 441 aa13.25□□□□□ -0.29
CHL1-208ENST00000453040 STK26Q9P289 416 aa13.25□□□□□ -0.29
CHL1-208ENST00000453040 DDX49Q9Y6V7 483 aaKnown RBP13.25□□□□□ -0.29
CHL1-208ENST00000453040 CDK12Q9NYV4 1490 aaPredicted RBP13.25□□□□□ -0.29
CHL1-208ENST00000453040 RTL1A6NKG5 1358 aa13.25□□□□□ -0.29
CHL1-208ENST00000453040 HAP1P54257 671 aaPredicted RBP13.25□□□□□ -0.29
CHL1-208ENST00000453040 TTC22Q5TAA0 569 aa13.25□□□□□ -0.29
CHL1-208ENST00000453040 DCTPP1Q9H773 170 aa13.25□□□□□ -0.29
CHL1-208ENST00000453040 KIAA0232Q92628 1395 aa13.25□□□□□ -0.29
CHL1-208ENST00000453040 SYCP1Q15431 976 aa13.25□□□□□ -0.29
CHL1-208ENST00000453040 DNAJC21Q5F1R6 531 aaKnown RBP13.24□□□□□ -0.29
CHL1-208ENST00000453040 ZNF428Q96B54 188 aa13.24□□□□□ -0.29
CHL1-208ENST00000453040 TMX1Q9H3N1 280 aa13.24□□□□□ -0.29
CHL1-208ENST00000453040 CUL4AQ13619 759 aa13.24□□□□□ -0.29
CHL1-208ENST00000453040 RABEP1Q15276 862 aa13.24□□□□□ -0.29
CHL1-208ENST00000453040 MCTP1Q6DN14 999 aa13.24□□□□□ -0.29
CHL1-208ENST00000453040 NALCNQ8IZF0 1738 aa13.24□□□□□ -0.29
CHL1-208ENST00000453040 SYCE3A1L190 88 aa13.23□□□□□ -0.29
CHL1-208ENST00000453040 U2AF1L5P0DN76 240 aaPredicted RBP13.23□□□□□ -0.29
CHL1-208ENST00000453040 U2AF1Q01081 240 aaKnown RBP eCLIP13.23□□□□□ -0.29
CHL1-208ENST00000453040 FAM208AQ9UK61 1670 aaKnown RBP13.23□□□□□ -0.29
CHL1-208ENST00000453040 CPSF1Q10570 1443 aaKnown RBP13.23□□□□□ -0.29
CHL1-208ENST00000453040 ITSN1Q15811 1721 aa13.23□□□□□ -0.29
CHL1-208ENST00000453040 OTUD7AQ8TE49 926 aaPredicted RBP13.23□□□□□ -0.29
CHL1-208ENST00000453040 C1orf115Q9H7X2 142 aa13.23□□□□□ -0.29
CHL1-208ENST00000453040 RSPH14Q9UHP6 348 aa13.23□□□□□ -0.29
CHL1-208ENST00000453040 LRRC37A3O60309 1634 aa13.23□□□□□ -0.29
CHL1-208ENST00000453040 RPAP1Q9BWH6 1393 aaPredicted RBP13.23□□□□□ -0.29
CHL1-208ENST00000453040 APBB1O00213 710 aa13.23□□□□□ -0.29
CHL1-208ENST00000453040 BRD1O95696 1058 aa13.23□□□□□ -0.29
CHL1-208ENST00000453040 GSCP56915 257 aaPredicted RBP13.23□□□□□ -0.29
CHL1-208ENST00000453040 C16orf71Q8IYS4 520 aaPredicted RBP13.23□□□□□ -0.29
CHL1-208ENST00000453040 U2SURPO15042 1029 aaKnown RBP13.22□□□□□ -0.29
CHL1-208ENST00000453040 CDK11BP21127 795 aaKnown RBP13.22□□□□□ -0.29
CHL1-208ENST00000453040 GGT6Q6P531 493 aa13.22□□□□□ -0.29
CHL1-208ENST00000453040 TRAK1Q9UPV9 953 aa13.22□□□□□ -0.29
CHL1-208ENST00000453040 CDC45O75419 566 aa13.22□□□□□ -0.29
CHL1-208ENST00000453040 ZNF622Q969S3 477 aaKnown RBP eCLIP13.22□□□□□ -0.29
CHL1-208ENST00000453040 NCAPGQ9BPX3 1015 aa13.22□□□□□ -0.29
CHL1-208ENST00000453040 FUCA2Q9BTY2 467 aa13.22□□□□□ -0.29
CHL1-208ENST00000453040 YTHDC2Q9H6S0 1430 aaKnown RBP13.22□□□□□ -0.29
CHL1-208ENST00000453040 GUCY2CP25092 1073 aa13.22□□□□□ -0.29
CHL1-208ENST00000453040 TMEM132EQ6IEE7 984 aa13.22□□□□□ -0.29
CHL1-208ENST00000453040 ANKRD45Q5TZF3 282 aa13.21□□□□□ -0.29
CHL1-208ENST00000453040 PEAK1Q9H792 1746 aa13.21□□□□□ -0.29
CHL1-208ENST00000453040 NUCB2P80303 420 aa13.21□□□□□ -0.29
CHL1-208ENST00000453040 PHACTR3Q96KR7 559 aa13.21□□□□□ -0.29
CHL1-208ENST00000453040 CWC22Q9HCG8 908 aaKnown RBP13.21□□□□□ -0.29
CHL1-208ENST00000453040 CHD2O14647 1828 aaKnown RBP13.2□□□□□ -0.3
CHL1-208ENST00000453040 FAM193AP78312 1265 aa13.2□□□□□ -0.3
CHL1-208ENST00000453040 PTPRCP08575 1304 aa13.2□□□□□ -0.3
CHL1-208ENST00000453040 NRXN3Q9Y4C0 1643 aa13.2□□□□□ -0.3
CHL1-208ENST00000453040 ERICH4A6NGS2 130 aa13.2□□□□□ -0.3
CHL1-208ENST00000453040 EXOC6BQ9Y2D4 811 aa13.2□□□□□ -0.3
CHL1-208ENST00000453040 FHOD1Q9Y613 1164 aa13.2□□□□□ -0.3
CHL1-208ENST00000453040 SGSM3Q96HU1 749 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms