RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 LMOD3Q0VAK6 560 aa11.7□□□□□ -0.54
COL8A1-203ENST00000452013 TTC5Q8N0Z6 440 aa11.7□□□□□ -0.54
COL8A1-203ENST00000452013 ANO8Q9HCE9 1232 aaPredicted RBP11.7□□□□□ -0.54
COL8A1-203ENST00000452013 TNS1Q9HBL0 1735 aaKnown RBP11.69□□□□□ -0.54
COL8A1-203ENST00000452013 BTBD11A6QL63 1104 aa11.69□□□□□ -0.54
COL8A1-203ENST00000452013 TMPOP42166 694 aaKnown RBP11.69□□□□□ -0.54
COL8A1-203ENST00000452013 TAF7Q15545 349 aaPredicted RBP11.69□□□□□ -0.54
COL8A1-203ENST00000452013 MCM10Q7L590 875 aa11.69□□□□□ -0.54
COL8A1-203ENST00000452013 CCDC146Q8IYE0 955 aa11.69□□□□□ -0.54
COL8A1-203ENST00000452013 FLAD1Q8NFF5 587 aa11.69□□□□□ -0.54
COL8A1-203ENST00000452013 EP400Q96L91 3159 aa11.69□□□□□ -0.54
COL8A1-203ENST00000452013 SLC39A6Q13433 755 aa11.68□□□□□ -0.54
COL8A1-203ENST00000452013 DCTN1Q14203 1278 aa11.68□□□□□ -0.54
COL8A1-203ENST00000452013 CCDC184Q52MB2 194 aa11.68□□□□□ -0.54
COL8A1-203ENST00000452013 PNISRQ8TF01 805 aaKnown RBP11.68□□□□□ -0.54
COL8A1-203ENST00000452013 AK7Q96M32 723 aa11.68□□□□□ -0.54
COL8A1-203ENST00000452013 CEMIPQ8WUJ3 1361 aa11.67□□□□□ -0.54
COL8A1-203ENST00000452013 ITPK1Q13572 414 aa11.67□□□□□ -0.54
COL8A1-203ENST00000452013 NEUROD2Q15784 382 aa11.67□□□□□ -0.54
COL8A1-203ENST00000452013 ZNF827Q17R98 1081 aa11.67□□□□□ -0.54
COL8A1-203ENST00000452013 RC3H1Q5TC82 1133 aaKnown RBP11.67□□□□□ -0.54
COL8A1-203ENST00000452013 ZNF790Q6PG37 636 aa11.67□□□□□ -0.54
COL8A1-203ENST00000452013 VSIG10Q8N0Z9 540 aa11.67□□□□□ -0.54
COL8A1-203ENST00000452013 SLC16A10Q8TF71 515 aa11.67□□□□□ -0.54
COL8A1-203ENST00000452013 TEX13AQ9BXU3 409 aaPredicted RBP11.67□□□□□ -0.54
COL8A1-203ENST00000452013 SHANK3Q9BYB0 1731 aa11.66□□□□□ -0.54
COL8A1-203ENST00000452013 MSH5O43196 834 aa11.66□□□□□ -0.54
COL8A1-203ENST00000452013 LINC00116Q8NCU8 138 aa11.66□□□□□ -0.54
COL8A1-203ENST00000452013 FMNL2Q96PY5 1086 aa11.66□□□□□ -0.54
COL8A1-203ENST00000452013 SLC4A9Q96Q91 983 aa11.66□□□□□ -0.54
COL8A1-203ENST00000452013 SPON1Q9HCB6 807 aa11.66□□□□□ -0.54
COL8A1-203ENST00000452013 SBF2Q86WG5 1849 aa11.65□□□□□ -0.54
COL8A1-203ENST00000452013 APAF1O14727 1248 aa11.65□□□□□ -0.54
COL8A1-203ENST00000452013 STARD3NLO95772 234 aa11.65□□□□□ -0.54
COL8A1-203ENST00000452013 DIEXFQ68CQ4 756 aaKnown RBP11.65□□□□□ -0.54
COL8A1-203ENST00000452013 RRP7AQ9Y3A4 280 aaKnown RBP11.65□□□□□ -0.54
COL8A1-203ENST00000452013 RTCBQ9Y3I0 505 aaKnown RBP11.65□□□□□ -0.54
COL8A1-203ENST00000452013 DOT1LQ8TEK3 1739 aa11.64□□□□□ -0.55
COL8A1-203ENST00000452013 RPS6KA4O75676 772 aa11.64□□□□□ -0.55
COL8A1-203ENST00000452013 SSFA2P28290 1259 aa11.64□□□□□ -0.55
COL8A1-203ENST00000452013 TRAPPC3LQ5T215 181 aa11.64□□□□□ -0.55
COL8A1-203ENST00000452013 ZNF496Q96IT1 587 aaPredicted RBP11.64□□□□□ -0.55
COL8A1-203ENST00000452013 MTFR1LQ9H019 292 aa11.64□□□□□ -0.55
COL8A1-203ENST00000452013 BABAM1Q9NWV8 329 aa11.64□□□□□ -0.55
COL8A1-203ENST00000452013 GNPATO15228 680 aa11.63□□□□□ -0.55
COL8A1-203ENST00000452013 ZBTB7AO95365 584 aa11.63□□□□□ -0.55
COL8A1-203ENST00000452013 CALD1Q05682 793 aaKnown RBP11.63□□□□□ -0.55
COL8A1-203ENST00000452013 COL23A1Q86Y22 540 aaPredicted RBP11.63□□□□□ -0.55
COL8A1-203ENST00000452013 DNAJC10Q8IXB1 793 aa11.63□□□□□ -0.55
COL8A1-203ENST00000452013 ATF5Q9Y2D1 282 aaPredicted RBP11.63□□□□□ -0.55
COL8A1-203ENST00000452013 RGPD3A6NKT7 1758 aaPredicted RBP11.63□□□□□ -0.55
COL8A1-203ENST00000452013 RGPD4Q7Z3J3 1758 aa11.63□□□□□ -0.55
COL8A1-203ENST00000452013 BTAF1O14981 1849 aa11.63□□□□□ -0.55
COL8A1-203ENST00000452013 PNPLA7Q6ZV29 1317 aa11.62□□□□□ -0.55
COL8A1-203ENST00000452013 CNTNAP4Q9C0A0 1308 aa11.62□□□□□ -0.55
COL8A1-203ENST00000452013 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.62□□□□□ -0.55
COL8A1-203ENST00000452013 CCER2I3L3R5 266 aa11.62□□□□□ -0.55
COL8A1-203ENST00000452013 KCNQ3O43525 872 aa11.62□□□□□ -0.55
COL8A1-203ENST00000452013 CENPBP07199 599 aaPredicted RBP11.62□□□□□ -0.55
COL8A1-203ENST00000452013 SNRPA1P09661 255 aaKnown RBP11.62□□□□□ -0.55
COL8A1-203ENST00000452013 CYP19A1P11511 503 aaPredicted RBP11.62□□□□□ -0.55
COL8A1-203ENST00000452013 ADRA2BP18089 450 aa11.62□□□□□ -0.55
COL8A1-203ENST00000452013 CRKLP46109 303 aaKnown RBP11.62□□□□□ -0.55
COL8A1-203ENST00000452013 FAM9BQ8IZU0 186 aa11.62□□□□□ -0.55
COL8A1-203ENST00000452013 THUMPD2Q9BTF0 503 aaKnown RBP11.62□□□□□ -0.55
COL8A1-203ENST00000452013 PDGFDQ9GZP0 370 aaPredicted RBP11.62□□□□□ -0.55
COL8A1-203ENST00000452013 MIS18AQ9NYP9 233 aa11.62□□□□□ -0.55
COL8A1-203ENST00000452013 TRIM35Q9UPQ4 493 aa11.62□□□□□ -0.55
COL8A1-203ENST00000452013 PHF14O94880 888 aa11.61□□□□□ -0.55
COL8A1-203ENST00000452013 POLD1P28340 1107 aa11.61□□□□□ -0.55
COL8A1-203ENST00000452013 NCBP3Q53F19 620 aaKnown RBP11.61□□□□□ -0.55
COL8A1-203ENST00000452013 CCDC87Q9NVE4 849 aa11.61□□□□□ -0.55
COL8A1-203ENST00000452013 TSPYL4Q9UJ04 414 aa11.61□□□□□ -0.55
COL8A1-203ENST00000452013 HEG1Q9ULI3 1381 aa11.61□□□□□ -0.55
COL8A1-203ENST00000452013 MRC1P22897 1456 aa11.61□□□□□ -0.55
COL8A1-203ENST00000452013 RREB1Q92766 1687 aa11.61□□□□□ -0.55
COL8A1-203ENST00000452013 TOGARAM1Q9Y4F4 1720 aa11.6□□□□□ -0.55
COL8A1-203ENST00000452013 RFC4P35249 363 aa11.6□□□□□ -0.55
COL8A1-203ENST00000452013 INTS5Q6P9B9 1019 aaKnown RBP11.6□□□□□ -0.55
COL8A1-203ENST00000452013 NPM2Q86SE8 214 aaKnown RBP11.6□□□□□ -0.55
COL8A1-203ENST00000452013 ARHGEF1Q92888 912 aaKnown RBP11.6□□□□□ -0.55
COL8A1-203ENST00000452013 PPP1R1BQ9UD71 204 aaPredicted RBP11.6□□□□□ -0.55
COL8A1-203ENST00000452013 LAS1LQ9Y4W2 734 aaKnown RBP11.6□□□□□ -0.55
COL8A1-203ENST00000452013 EIF4A1P60842 406 aaKnown RBP11.59□□□□□ -0.55
COL8A1-203ENST00000452013 NGEFQ8N5V2 710 aa11.59□□□□□ -0.55
COL8A1-203ENST00000452013 NUP188Q5SRE5 1749 aa11.58□□□□□ -0.56
COL8A1-203ENST00000452013 A0A087WZG4 1122 aa11.58□□□□□ -0.56
COL8A1-203ENST00000452013 CHL1O00533 1208 aa11.58□□□□□ -0.56
COL8A1-203ENST00000452013 CANXP27824 592 aaKnown RBP11.58□□□□□ -0.56
COL8A1-203ENST00000452013 CCDC27Q2M243 656 aa11.58□□□□□ -0.56
COL8A1-203ENST00000452013 NLGN1Q8N2Q7 840 aa11.58□□□□□ -0.56
COL8A1-203ENST00000452013 CFAP44Q96MT7 982 aa11.58□□□□□ -0.56
COL8A1-203ENST00000452013 USP16Q9Y5T5 823 aa11.58□□□□□ -0.56
COL8A1-203ENST00000452013 GIGYF1O75420 1035 aaPredicted RBP11.57□□□□□ -0.56
COL8A1-203ENST00000452013 GNAI1P63096 354 aa11.57□□□□□ -0.56
COL8A1-203ENST00000452013 SMIM5Q71RC9 77 aa11.57□□□□□ -0.56
COL8A1-203ENST00000452013 PELP1Q8IZL8 1130 aaKnown RBP11.57□□□□□ -0.56
COL8A1-203ENST00000452013 ADAMTS7Q9UKP4 1686 aa11.56□□□□□ -0.56
COL8A1-203ENST00000452013 ZPR1O75312 459 aa11.56□□□□□ -0.56
COL8A1-203ENST00000452013 A1BGP04217 495 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms