RNA–Protein interactions for RNA: ENST00000451953.1

LINC01007-203, Transcript of long intergenic non-protein coding RNA 1007, humanhuman

TSL 4 BASIC

Gene LINC01007, Length 579 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01007-203ENST00000451953 FAM196AQ6ZSG2 479 aa10.84□□□□□ -0.67
LINC01007-203ENST00000451953 PIGBQ92521 554 aa10.84□□□□□ -0.67
LINC01007-203ENST00000451953 FANCIQ9NVI1 1328 aa10.84□□□□□ -0.67
LINC01007-203ENST00000451953 DUSP27Q5VZP5 1158 aa10.83□□□□□ -0.68
LINC01007-203ENST00000451953 TRMT2AQ8IZ69 625 aaKnown RBP10.83□□□□□ -0.68
LINC01007-203ENST00000451953 TTC5Q8N0Z6 440 aa10.83□□□□□ -0.68
LINC01007-203ENST00000451953 PARP4Q9UKK3 1724 aaKnown RBP10.83□□□□□ -0.68
LINC01007-203ENST00000451953 KCNQ3O43525 872 aa10.82□□□□□ -0.68
LINC01007-203ENST00000451953 KCNQ2O43526 872 aa10.82□□□□□ -0.68
LINC01007-203ENST00000451953 EXOSC9Q06265 439 aaKnown RBP10.82□□□□□ -0.68
LINC01007-203ENST00000451953 SLC39A6Q13433 755 aa10.82□□□□□ -0.68
LINC01007-203ENST00000451953 ZNF790Q6PG37 636 aa10.82□□□□□ -0.68
LINC01007-203ENST00000451953 RGS12O14924 1447 aa10.82□□□□□ -0.68
LINC01007-203ENST00000451953 ASAP1Q9ULH1 1129 aa10.81□□□□□ -0.68
LINC01007-203ENST00000451953 THSD7AQ9UPZ6 1657 aa10.81□□□□□ -0.68
LINC01007-203ENST00000451953 PKD1L3Q7Z443 1732 aa10.81□□□□□ -0.68
LINC01007-203ENST00000451953 ELL2O00472 640 aaPredicted RBP10.8□□□□□ -0.68
LINC01007-203ENST00000451953 PTCD1O75127 700 aaKnown RBP10.8□□□□□ -0.68
LINC01007-203ENST00000451953 EIF4A1P60842 406 aaKnown RBP10.8□□□□□ -0.68
LINC01007-203ENST00000451953 C8orf58Q8NAV2 365 aa10.8□□□□□ -0.68
LINC01007-203ENST00000451953 BCL11BQ9C0K0 894 aaPredicted RBP10.8□□□□□ -0.68
LINC01007-203ENST00000451953 ATG3Q9NT62 314 aa10.8□□□□□ -0.68
LINC01007-203ENST00000451953 LRRC37A3O60309 1634 aa10.8□□□□□ -0.68
LINC01007-203ENST00000451953 BCL9O00512 1426 aa10.79□□□□□ -0.68
LINC01007-203ENST00000451953 TRIM37O94972 964 aa10.79□□□□□ -0.68
LINC01007-203ENST00000451953 KRT24Q2M2I5 525 aa10.79□□□□□ -0.68
LINC01007-203ENST00000451953 PTF1AQ7RTS3 328 aa10.79□□□□□ -0.68
LINC01007-203ENST00000451953 SMARCC1Q92922 1105 aaPredicted RBP10.79□□□□□ -0.68
LINC01007-203ENST00000451953 ZNF496Q96IT1 587 aaPredicted RBP10.79□□□□□ -0.68
LINC01007-203ENST00000451953 FMNL2Q96PY5 1086 aa10.79□□□□□ -0.68
LINC01007-203ENST00000451953 TWISTNBQ3B726 338 aaPredicted RBP10.78□□□□□ -0.68
LINC01007-203ENST00000451953 TSPYL6Q8N831 410 aa10.78□□□□□ -0.68
LINC01007-203ENST00000451953 RBM42Q9BTD8 480 aaKnown RBP10.78□□□□□ -0.68
LINC01007-203ENST00000451953 MRC1P22897 1456 aa10.77□□□□□ -0.69
LINC01007-203ENST00000451953 SNRPA1P09661 255 aaKnown RBP10.77□□□□□ -0.69
LINC01007-203ENST00000451953 CT47B1P0C2W7 299 aaPredicted RBP10.77□□□□□ -0.69
LINC01007-203ENST00000451953 VAMP4O75379 141 aa10.76□□□□□ -0.69
LINC01007-203ENST00000451953 GIGYF1O75420 1035 aaPredicted RBP10.76□□□□□ -0.69
LINC01007-203ENST00000451953 EIF2S2P20042 333 aaKnown RBP10.76□□□□□ -0.69
LINC01007-203ENST00000451953 CHMP4AQ9BY43 222 aa10.76□□□□□ -0.69
LINC01007-203ENST00000451953 RCAN3Q9UKA8 241 aa10.76□□□□□ -0.69
LINC01007-203ENST00000451953 PALLDQ8WX93 1383 aa10.76□□□□□ -0.69
LINC01007-203ENST00000451953 LOC102724428A0A0B4J2F2 783 aa10.75□□□□□ -0.69
LINC01007-203ENST00000451953 TCERG1O14776 1098 aaKnown RBP10.75□□□□□ -0.69
LINC01007-203ENST00000451953 HOXB7P09629 217 aa10.75□□□□□ -0.69
LINC01007-203ENST00000451953 SIK1P57059 783 aa10.75□□□□□ -0.69
LINC01007-203ENST00000451953 NECTIN2Q92692 538 aa10.75□□□□□ -0.69
LINC01007-203ENST00000451953 ZNF428Q96B54 188 aa10.75□□□□□ -0.69
LINC01007-203ENST00000451953 SOS1Q07889 1333 aaPredicted RBP10.75□□□□□ -0.69
LINC01007-203ENST00000451953 PRAMEF22A3QJZ6 481 aa10.74□□□□□ -0.69
LINC01007-203ENST00000451953 APBA3O96018 575 aa10.74□□□□□ -0.69
LINC01007-203ENST00000451953 HDGFL1Q5TGJ6 251 aa10.74□□□□□ -0.69
LINC01007-203ENST00000451953 CCDC30Q5VVM6 783 aa10.74□□□□□ -0.69
LINC01007-203ENST00000451953 VSIG10Q8N0Z9 540 aa10.74□□□□□ -0.69
LINC01007-203ENST00000451953 TEX13AQ9BXU3 409 aaPredicted RBP10.74□□□□□ -0.69
LINC01007-203ENST00000451953 WNK3Q9BYP7 1800 aa10.74□□□□□ -0.69
LINC01007-203ENST00000451953 HEG1Q9ULI3 1381 aa10.74□□□□□ -0.69
LINC01007-203ENST00000451953 ADAMTS7Q9UKP4 1686 aa10.73□□□□□ -0.69
LINC01007-203ENST00000451953 SHANK3Q9BYB0 1731 aa10.73□□□□□ -0.69
LINC01007-203ENST00000451953 STARD3NLO95772 234 aa10.73□□□□□ -0.69
LINC01007-203ENST00000451953 ATP6V1AP38606 617 aa10.73□□□□□ -0.69
LINC01007-203ENST00000451953 RARSP54136 660 aaKnown RBP10.73□□□□□ -0.69
LINC01007-203ENST00000451953 SF3B2Q13435 895 aaKnown RBP10.73□□□□□ -0.69
LINC01007-203ENST00000451953 DNAJC10Q8IXB1 793 aa10.73□□□□□ -0.69
LINC01007-203ENST00000451953 BCL2L13Q9BXK5 485 aa10.73□□□□□ -0.69
LINC01007-203ENST00000451953 STK31Q9BXU1 1019 aa10.73□□□□□ -0.69
LINC01007-203ENST00000451953 SMC4Q9NTJ3 1288 aa10.73□□□□□ -0.69
LINC01007-203ENST00000451953 USP16Q9Y5T5 823 aa10.73□□□□□ -0.69
LINC01007-203ENST00000451953 SSH1Q8WYL5 1049 aa10.72□□□□□ -0.69
LINC01007-203ENST00000451953 SLC4A9Q96Q91 983 aa10.72□□□□□ -0.69
LINC01007-203ENST00000451953 CCNL1Q9UK58 526 aaPredicted RBP10.72□□□□□ -0.69
LINC01007-203ENST00000451953 DLG5Q8TDM6 1919 aa10.72□□□□□ -0.69
LINC01007-203ENST00000451953 BCAR3O75815 825 aa10.71□□□□□ -0.69
LINC01007-203ENST00000451953 SLC4A2P04920 1241 aa10.71□□□□□ -0.69
LINC01007-203ENST00000451953 KCNQ4P56696 695 aa10.71□□□□□ -0.69
LINC01007-203ENST00000451953 ALDH1L2Q3SY69 923 aa10.71□□□□□ -0.69
LINC01007-203ENST00000451953 PLSCR1O15162 318 aa10.7□□□□□ -0.7
LINC01007-203ENST00000451953 A1BGP04217 495 aa10.7□□□□□ -0.7
LINC01007-203ENST00000451953 CYP19A1P11511 503 aaPredicted RBP10.7□□□□□ -0.7
LINC01007-203ENST00000451953 ITPK1Q13572 414 aa10.7□□□□□ -0.7
LINC01007-203ENST00000451953 SLC27A3Q5K4L6 730 aa10.7□□□□□ -0.7
LINC01007-203ENST00000451953 FRAT1Q92837 279 aaPredicted RBP10.7□□□□□ -0.7
LINC01007-203ENST00000451953 CHPF2Q9P2E5 772 aa10.7□□□□□ -0.7
LINC01007-203ENST00000451953 DBF4Q9UBU7 674 aaPredicted RBP10.7□□□□□ -0.7
LINC01007-203ENST00000451953 SUPT16HQ9Y5B9 1047 aaKnown RBP10.7□□□□□ -0.7
LINC01007-203ENST00000451953 SCN11AQ9UI33 1791 aa10.7□□□□□ -0.7
LINC01007-203ENST00000451953 TOGARAM1Q9Y4F4 1720 aa10.7□□□□□ -0.7
LINC01007-203ENST00000451953 CANXP27824 592 aaKnown RBP10.69□□□□□ -0.7
LINC01007-203ENST00000451953 TXNRD1Q16881 649 aa10.69□□□□□ -0.7
LINC01007-203ENST00000451953 MRPL50Q8N5N7 158 aaKnown RBP10.69□□□□□ -0.7
LINC01007-203ENST00000451953 DDX21Q9NR30 783 aaKnown RBP eCLIP10.69□□□□□ -0.7
LINC01007-203ENST00000451953 KCPQ6ZWJ8 1503 aa10.68□□□□□ -0.7
LINC01007-203ENST00000451953 ERBB4Q15303 1308 aa10.68□□□□□ -0.7
LINC01007-203ENST00000451953 DOT1LQ8TEK3 1739 aa10.68□□□□□ -0.7
LINC01007-203ENST00000451953 IPO8O15397 1037 aaKnown RBP10.68□□□□□ -0.7
LINC01007-203ENST00000451953 ANXA1P04083 346 aa10.68□□□□□ -0.7
LINC01007-203ENST00000451953 MYL6BP14649 208 aa10.68□□□□□ -0.7
LINC01007-203ENST00000451953 HMGB2P26583 209 aaKnown RBP10.68□□□□□ -0.7
LINC01007-203ENST00000451953 CRKLP46109 303 aaKnown RBP10.68□□□□□ -0.7
LINC01007-203ENST00000451953 BAG6P46379 1132 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms