RNA–Protein interactions for RNA: ENST00000450179.1

TMEM254-206, Transcript of transmembrane protein 254, humanhuman

TSL 3

Gene TMEM254, Length 719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-206ENST00000450179 ITSN1Q15811 1721 aa8.64□□□□□ -1.03
TMEM254-206ENST00000450179 ARHGAP33O14559 1287 aa8.64□□□□□ -1.03
TMEM254-206ENST00000450179 NBPF1Q3BBV0 1214 aa8.64□□□□□ -1.03
TMEM254-206ENST00000450179 MEX3CQ5U5Q3 659 aaKnown RBP8.64□□□□□ -1.03
TMEM254-206ENST00000450179 DMRTA1Q5VZB9 504 aa8.64□□□□□ -1.03
TMEM254-206ENST00000450179 L3MBTL2Q969R5 705 aa8.64□□□□□ -1.03
TMEM254-206ENST00000450179 HIRIP3Q9BW71 556 aaPredicted RBP8.64□□□□□ -1.03
TMEM254-206ENST00000450179 EMILIN3Q9NT22 766 aa8.64□□□□□ -1.03
TMEM254-206ENST00000450179 POGKQ9P215 609 aa8.64□□□□□ -1.03
TMEM254-206ENST00000450179 HCSTQ9UBK5 93 aa8.64□□□□□ -1.03
TMEM254-206ENST00000450179 ALS2Q96Q42 1657 aa8.64□□□□□ -1.03
TMEM254-206ENST00000450179 CRYBG1Q9Y4K1 1723 aa8.63□□□□□ -1.03
TMEM254-206ENST00000450179 AFF2P51816 1311 aa8.63□□□□□ -1.03
TMEM254-206ENST00000450179 SPATA31A3Q5VYP0 1347 aa8.63□□□□□ -1.03
TMEM254-206ENST00000450179 WASLO00401 505 aaPredicted RBP8.63□□□□□ -1.03
TMEM254-206ENST00000450179 CANXP27824 592 aaKnown RBP8.63□□□□□ -1.03
TMEM254-206ENST00000450179 PSEN2P49810 448 aa8.63□□□□□ -1.03
TMEM254-206ENST00000450179 ZNF772Q68DY9 489 aaPredicted RBP8.63□□□□□ -1.03
TMEM254-206ENST00000450179 TMUB1Q9BVT8 246 aa8.63□□□□□ -1.03
TMEM254-206ENST00000450179 GPHNQ9NQX3 736 aaPredicted RBP8.63□□□□□ -1.03
TMEM254-206ENST00000450179 TNS3Q68CZ2 1445 aa8.63□□□□□ -1.03
TMEM254-206ENST00000450179 QRICH2Q9H0J4 1663 aa8.62□□□□□ -1.03
TMEM254-206ENST00000450179 CSB-PGBD3P0DP91 1061 aa8.62□□□□□ -1.03
TMEM254-206ENST00000450179 CCDC125Q86Z20 511 aa8.62□□□□□ -1.03
TMEM254-206ENST00000450179 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.62□□□□□ -1.03
TMEM254-206ENST00000450179 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.62□□□□□ -1.03
TMEM254-206ENST00000450179 CDK12Q9NYV4 1490 aaPredicted RBP8.62□□□□□ -1.03
TMEM254-206ENST00000450179 SBNO1A3KN83 1393 aa8.61□□□□□ -1.03
TMEM254-206ENST00000450179 EIF3AQ14152 1382 aaKnown RBP8.61□□□□□ -1.03
TMEM254-206ENST00000450179 RBM47A0AV96 593 aaKnown RBP8.61□□□□□ -1.03
TMEM254-206ENST00000450179 ADAMTS2O95450 1211 aa8.61□□□□□ -1.03
TMEM254-206ENST00000450179 FECHP22830 423 aa8.61□□□□□ -1.03
TMEM254-206ENST00000450179 CLCN1P35523 988 aa8.61□□□□□ -1.03
TMEM254-206ENST00000450179 KRT28Q7Z3Y7 464 aa8.61□□□□□ -1.03
TMEM254-206ENST00000450179 C8orf37Q96NL8 207 aa8.61□□□□□ -1.03
TMEM254-206ENST00000450179 REPIN1Q9BWE0 567 aaKnown RBP8.61□□□□□ -1.03
TMEM254-206ENST00000450179 BCL9LQ86UU0 1499 aa8.61□□□□□ -1.03
TMEM254-206ENST00000450179 PROCA1Q8NCQ7 364 aaPredicted RBP8.6□□□□□ -1.03
TMEM254-206ENST00000450179 PMFBP1Q8TBY8 1022 aa8.6□□□□□ -1.03
TMEM254-206ENST00000450179 IVNS1ABPQ9Y6Y0 642 aa8.6□□□□□ -1.03
TMEM254-206ENST00000450179 SLIT2O94813 1529 aa8.59□□□□□ -1.03
TMEM254-206ENST00000450179 PLCH1Q4KWH8 1693 aa8.59□□□□□ -1.03
TMEM254-206ENST00000450179 UNCXA6NJT0 531 aa8.59□□□□□ -1.03
TMEM254-206ENST00000450179 TBC1D12O60347 775 aa8.59□□□□□ -1.03
TMEM254-206ENST00000450179 NEUROD1Q13562 356 aa8.59□□□□□ -1.03
TMEM254-206ENST00000450179 GLMNQ92990 594 aa8.59□□□□□ -1.03
TMEM254-206ENST00000450179 NGLY1Q96IV0 654 aa8.59□□□□□ -1.03
TMEM254-206ENST00000450179 RGS12O14924 1447 aa8.59□□□□□ -1.03
TMEM254-206ENST00000450179 ATRNO75882 1429 aa8.59□□□□□ -1.03
TMEM254-206ENST00000450179 NWD2Q9ULI1 1742 aa8.59□□□□□ -1.03
TMEM254-206ENST00000450179 GPRASP1Q5JY77 1395 aa8.59□□□□□ -1.03
TMEM254-206ENST00000450179 RXRBP28702 533 aa8.58□□□□□ -1.04
TMEM254-206ENST00000450179 PSME1Q06323 249 aa8.58□□□□□ -1.04
TMEM254-206ENST00000450179 NBPF8Q3BBV2 869 aa8.58□□□□□ -1.04
TMEM254-206ENST00000450179 TMEM259Q4ZIN3 620 aa8.58□□□□□ -1.04
TMEM254-206ENST00000450179 KCTD12Q96CX2 325 aaKnown RBP8.58□□□□□ -1.04
TMEM254-206ENST00000450179 NUDT16Q96DE0 195 aaKnown RBP8.58□□□□□ -1.04
TMEM254-206ENST00000450179 CDK19Q9BWU1 502 aa8.58□□□□□ -1.04
TMEM254-206ENST00000450179 SNRKQ9NRH2 765 aa8.58□□□□□ -1.04
TMEM254-206ENST00000450179 POLR3AO14802 1390 aaPredicted RBP8.58□□□□□ -1.04
TMEM254-206ENST00000450179 ARHGEF10O15013 1369 aa8.58□□□□□ -1.04
TMEM254-206ENST00000450179 NRAPQ86VF7 1730 aa8.57□□□□□ -1.04
TMEM254-206ENST00000450179 CENPJQ9HC77 1338 aaPredicted RBP8.57□□□□□ -1.04
TMEM254-206ENST00000450179 GRXCR2A6NFK2 248 aa8.57□□□□□ -1.04
TMEM254-206ENST00000450179 HRO43593 1189 aa8.57□□□□□ -1.04
TMEM254-206ENST00000450179 RBM6P78332 1123 aaKnown RBP8.57□□□□□ -1.04
TMEM254-206ENST00000450179 CABLES1Q8TDN4 633 aa8.57□□□□□ -1.04
TMEM254-206ENST00000450179 QTRT2Q9H974 415 aaKnown RBP8.57□□□□□ -1.04
TMEM254-206ENST00000450179 GPCPD1Q9NPB8 672 aa8.57□□□□□ -1.04
TMEM254-206ENST00000450179 USP21Q9UK80 565 aa8.57□□□□□ -1.04
TMEM254-206ENST00000450179 PHRF1Q9P1Y6 1649 aaKnown RBP8.57□□□□□ -1.04
TMEM254-206ENST00000450179 GLI3P10071 1580 aa8.56□□□□□ -1.04
TMEM254-206ENST00000450179 PSDA5PKW4 1024 aaPredicted RBP8.56□□□□□ -1.04
TMEM254-206ENST00000450179 OSBPP22059 807 aa8.56□□□□□ -1.04
TMEM254-206ENST00000450179 PLPP6Q8IY26 295 aa8.56□□□□□ -1.04
TMEM254-206ENST00000450179 PTCD2Q8WV60 388 aaKnown RBP8.56□□□□□ -1.04
TMEM254-206ENST00000450179 PRM3Q9NNZ6 103 aa8.56□□□□□ -1.04
TMEM254-206ENST00000450179 RALGAPBQ86X10 1494 aa8.56□□□□□ -1.04
TMEM254-206ENST00000450179 TK2O00142 265 aa8.55□□□□□ -1.04
TMEM254-206ENST00000450179 RFC5P40937 340 aa8.55□□□□□ -1.04
TMEM254-206ENST00000450179 TRPC5Q9UL62 973 aaPredicted RBP8.55□□□□□ -1.04
TMEM254-206ENST00000450179 ROCK2O75116 1388 aaKnown RBP8.55□□□□□ -1.04
TMEM254-206ENST00000450179 COL14A1Q05707 1796 aaKnown RBP8.55□□□□□ -1.04
TMEM254-206ENST00000450179 AKAP12Q02952 1782 aa8.54□□□□□ -1.04
TMEM254-206ENST00000450179 SSTR3P32745 418 aaPredicted RBP8.54□□□□□ -1.04
TMEM254-206ENST00000450179 SRPK2P78362 688 aaKnown RBP8.54□□□□□ -1.04
TMEM254-206ENST00000450179 NGDNQ8NEJ9 315 aaKnown RBP8.54□□□□□ -1.04
TMEM254-206ENST00000450179 GDPD2Q9HCC8 539 aa8.54□□□□□ -1.04
TMEM254-206ENST00000450179 GNEQ9Y223 722 aaKnown RBP8.54□□□□□ -1.04
TMEM254-206ENST00000450179 EP400Q96L91 3159 aa8.54□□□□□ -1.04
TMEM254-206ENST00000450179 PPIP5K1Q6PFW1 1433 aa8.54□□□□□ -1.04
TMEM254-206ENST00000450179 ACEP12821 1306 aa8.54□□□□□ -1.04
TMEM254-206ENST00000450179 NRKQ7Z2Y5 1582 aa8.53□□□□□ -1.04
TMEM254-206ENST00000450179 TONSLQ96HA7 1378 aa8.53□□□□□ -1.04
TMEM254-206ENST00000450179 SBNO2Q9Y2G9 1366 aa8.53□□□□□ -1.04
TMEM254-206ENST00000450179 BRWD3Q6RI45 1802 aa8.53□□□□□ -1.04
TMEM254-206ENST00000450179 DSG2Q14126 1118 aa8.53□□□□□ -1.04
TMEM254-206ENST00000450179 PPP4R3BQ5MIZ7 849 aa8.53□□□□□ -1.04
TMEM254-206ENST00000450179 UNC5CLQ8IV45 518 aa8.53□□□□□ -1.04
TMEM254-206ENST00000450179 UPF1Q92900 1129 aaKnown RBP eCLIP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms