RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 AXIN2Q9Y2T1 843 aa11.71□□□□□ -0.53
LINC01961-201ENST00000449954 IGSF1Q8N6C5 1336 aa11.7□□□□□ -0.54
LINC01961-201ENST00000449954 EFCAB3Q8N7B9 438 aa11.7□□□□□ -0.54
LINC01961-201ENST00000449954 RGL2O15211 777 aa11.69□□□□□ -0.54
LINC01961-201ENST00000449954 NLRP6P59044 892 aa11.69□□□□□ -0.54
LINC01961-201ENST00000449954 PDCD7Q8N8D1 485 aaKnown RBP11.69□□□□□ -0.54
LINC01961-201ENST00000449954 CDK19Q9BWU1 502 aa11.69□□□□□ -0.54
LINC01961-201ENST00000449954 LY75O60449 1722 aa11.69□□□□□ -0.54
LINC01961-201ENST00000449954 NMRK2Q9NPI5 230 aa11.68□□□□□ -0.54
LINC01961-201ENST00000449954 C10orf71Q711Q0 1435 aa11.68□□□□□ -0.54
LINC01961-201ENST00000449954 RGPD5Q99666 1765 aa11.67□□□□□ -0.54
LINC01961-201ENST00000449954 MSL1Q68DK7 614 aa11.67□□□□□ -0.54
LINC01961-201ENST00000449954 ARHGEF25Q86VW2 580 aa11.67□□□□□ -0.54
LINC01961-201ENST00000449954 COL23A1Q86Y22 540 aaPredicted RBP11.67□□□□□ -0.54
LINC01961-201ENST00000449954 PLEKHG2Q9H7P9 1386 aa11.67□□□□□ -0.54
LINC01961-201ENST00000449954 QRICH2Q9H0J4 1663 aa11.66□□□□□ -0.54
LINC01961-201ENST00000449954 HMGB2P26583 209 aaKnown RBP11.66□□□□□ -0.54
LINC01961-201ENST00000449954 KCNH5Q8NCM2 988 aa11.66□□□□□ -0.54
LINC01961-201ENST00000449954 L3MBTL3Q96JM7 780 aaPredicted RBP11.66□□□□□ -0.54
LINC01961-201ENST00000449954 KAT6BQ8WYB5 2073 aa11.66□□□□□ -0.54
LINC01961-201ENST00000449954 IL2RBP14784 551 aa11.65□□□□□ -0.54
LINC01961-201ENST00000449954 DPY19L2Q6NUT2 758 aa11.65□□□□□ -0.54
LINC01961-201ENST00000449954 FLAD1Q8NFF5 587 aa11.65□□□□□ -0.54
LINC01961-201ENST00000449954 STK24Q9Y6E0 443 aa11.64□□□□□ -0.55
LINC01961-201ENST00000449954 TNRC6CQ9HCJ0 1690 aaKnown RBP11.63□□□□□ -0.55
LINC01961-201ENST00000449954 SLAIN1Q8ND83 568 aa11.63□□□□□ -0.55
LINC01961-201ENST00000449954 CCNL1Q9UK58 526 aaPredicted RBP11.63□□□□□ -0.55
LINC01961-201ENST00000449954 ANKRD36BQ8N2N9 1353 aa11.63□□□□□ -0.55
LINC01961-201ENST00000449954 KDM2BQ8NHM5 1336 aa11.62□□□□□ -0.55
LINC01961-201ENST00000449954 NFAT5O94916 1531 aa11.62□□□□□ -0.55
LINC01961-201ENST00000449954 STK25O00506 426 aa11.62□□□□□ -0.55
LINC01961-201ENST00000449954 KCNQ4P56696 695 aa11.62□□□□□ -0.55
LINC01961-201ENST00000449954 FAM161AQ3B820 660 aa11.62□□□□□ -0.55
LINC01961-201ENST00000449954 SMC1BQ8NDV3 1235 aa11.62□□□□□ -0.55
LINC01961-201ENST00000449954 MPHOSPH9Q99550 1183 aa11.62□□□□□ -0.55
LINC01961-201ENST00000449954 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.62□□□□□ -0.55
LINC01961-201ENST00000449954 PXDNLA1KZ92 1463 aa11.62□□□□□ -0.55
LINC01961-201ENST00000449954 C5P01031 1676 aa11.62□□□□□ -0.55
LINC01961-201ENST00000449954 USP54Q70EL1 1684 aa11.62□□□□□ -0.55
LINC01961-201ENST00000449954 ERBB3P21860 1342 aa11.61□□□□□ -0.55
LINC01961-201ENST00000449954 DOT1LQ8TEK3 1739 aa11.61□□□□□ -0.55
LINC01961-201ENST00000449954 G3V3G9 751 aa11.6□□□□□ -0.55
LINC01961-201ENST00000449954 SOX12O15370 315 aa11.6□□□□□ -0.55
LINC01961-201ENST00000449954 SYTL4Q96C24 671 aaPredicted RBP11.6□□□□□ -0.55
LINC01961-201ENST00000449954 STAC3Q96MF2 364 aa11.6□□□□□ -0.55
LINC01961-201ENST00000449954 NSD3Q9BZ95 1437 aa11.6□□□□□ -0.55
LINC01961-201ENST00000449954 NSD2O96028 1365 aa11.59□□□□□ -0.55
LINC01961-201ENST00000449954 PRDM10Q9NQV6 1147 aa11.59□□□□□ -0.55
LINC01961-201ENST00000449954 NLRP2Q9NX02 1062 aa11.59□□□□□ -0.55
LINC01961-201ENST00000449954 PKD1L3Q7Z443 1732 aa11.59□□□□□ -0.55
LINC01961-201ENST00000449954 USP47Q96K76 1375 aa11.58□□□□□ -0.56
LINC01961-201ENST00000449954 SRPK2P78362 688 aaKnown RBP11.58□□□□□ -0.56
LINC01961-201ENST00000449954 C3orf67Q6ZVT6 689 aa11.58□□□□□ -0.56
LINC01961-201ENST00000449954 FAM163AQ96GL9 167 aaPredicted RBP11.58□□□□□ -0.56
LINC01961-201ENST00000449954 KCPQ6ZWJ8 1503 aa11.57□□□□□ -0.56
LINC01961-201ENST00000449954 PRIM1P49642 420 aaKnown RBP11.57□□□□□ -0.56
LINC01961-201ENST00000449954 KIAA1210Q9ULL0 1709 aa11.57□□□□□ -0.56
LINC01961-201ENST00000449954 KIF13BQ9NQT8 1826 aa11.56□□□□□ -0.56
LINC01961-201ENST00000449954 BOLA1Q9Y3E2 137 aa11.56□□□□□ -0.56
LINC01961-201ENST00000449954 KIAA1551Q9HCM1 1747 aa11.55□□□□□ -0.56
LINC01961-201ENST00000449954 MLLT1Q03111 559 aaPredicted RBP11.55□□□□□ -0.56
LINC01961-201ENST00000449954 ARHGAP27Q6ZUM4 889 aa11.55□□□□□ -0.56
LINC01961-201ENST00000449954 DDX54Q8TDD1 881 aaKnown RBP11.55□□□□□ -0.56
LINC01961-201ENST00000449954 BCS1LQ9Y276 419 aa11.55□□□□□ -0.56
LINC01961-201ENST00000449954 FAM208AQ9UK61 1670 aaKnown RBP11.55□□□□□ -0.56
LINC01961-201ENST00000449954 TTC21AQ8NDW8 1320 aa11.55□□□□□ -0.56
LINC01961-201ENST00000449954 TAF1LQ8IZX4 1826 aa11.54□□□□□ -0.56
LINC01961-201ENST00000449954 TGFB2P61812 414 aa11.54□□□□□ -0.56
LINC01961-201ENST00000449954 C9orf131Q5VYM1 1079 aa11.54□□□□□ -0.56
LINC01961-201ENST00000449954 C4BP0C0L5 1744 aa11.54□□□□□ -0.56
LINC01961-201ENST00000449954 TOGARAM1Q9Y4F4 1720 aa11.53□□□□□ -0.56
LINC01961-201ENST00000449954 RRAGCQ9HB90 399 aa11.53□□□□□ -0.56
LINC01961-201ENST00000449954 CABP1Q9NZU7 370 aa11.53□□□□□ -0.56
LINC01961-201ENST00000449954 TTC21BQ7Z4L5 1316 aa11.53□□□□□ -0.56
LINC01961-201ENST00000449954 FOXN1O15353 648 aa11.52□□□□□ -0.57
LINC01961-201ENST00000449954 DCAF11Q8TEB1 546 aa11.52□□□□□ -0.57
LINC01961-201ENST00000449954 AK7Q96M32 723 aa11.52□□□□□ -0.57
LINC01961-201ENST00000449954 UBR3Q6ZT12 1888 aa11.52□□□□□ -0.57
LINC01961-201ENST00000449954 ARFGEF1Q9Y6D6 1849 aa11.51□□□□□ -0.57
LINC01961-201ENST00000449954 SSFA2P28290 1259 aa11.51□□□□□ -0.57
LINC01961-201ENST00000449954 CTCFP49711 727 aaPredicted RBP11.51□□□□□ -0.57
LINC01961-201ENST00000449954 ANKRD24Q8TF21 1146 aa11.51□□□□□ -0.57
LINC01961-201ENST00000449954 AIDAQ96BJ3 306 aa11.51□□□□□ -0.57
LINC01961-201ENST00000449954 ABHD8Q96I13 439 aa11.51□□□□□ -0.57
LINC01961-201ENST00000449954 KDM2AQ9Y2K7 1162 aa11.51□□□□□ -0.57
LINC01961-201ENST00000449954 ZC3H4Q9UPT8 1303 aaKnown RBP11.51□□□□□ -0.57
LINC01961-201ENST00000449954 LTN1O94822 1766 aa11.51□□□□□ -0.57
LINC01961-201ENST00000449954 N4BP2Q86UW6 1770 aaPredicted RBP11.51□□□□□ -0.57
LINC01961-201ENST00000449954 BRCA1P38398 1863 aaKnown RBP11.51□□□□□ -0.57
LINC01961-201ENST00000449954 FCHSD2O94868 740 aa11.5□□□□□ -0.57
LINC01961-201ENST00000449954 RGS19P49795 217 aa11.5□□□□□ -0.57
LINC01961-201ENST00000449954 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.49□□□□□ -0.57
LINC01961-201ENST00000449954 MS4A4AQ96JQ5 239 aa11.49□□□□□ -0.57
LINC01961-201ENST00000449954 RNF181Q9P0P0 153 aa11.49□□□□□ -0.57
LINC01961-201ENST00000449954 PALLDQ8WX93 1383 aa11.49□□□□□ -0.57
LINC01961-201ENST00000449954 PHF14O94880 888 aa11.48□□□□□ -0.57
LINC01961-201ENST00000449954 CENPJQ9HC77 1338 aaPredicted RBP11.48□□□□□ -0.57
LINC01961-201ENST00000449954 A0A0G2JLW4 131 aa11.47□□□□□ -0.57
LINC01961-201ENST00000449954 MMP10P09238 476 aa11.47□□□□□ -0.57
LINC01961-201ENST00000449954 VEGFAP15692 232 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms