RNA–Protein interactions for RNA: ENST00000449440.5

LRRC8B-204, Transcript of leucine rich repeat containing 8 VRAC subunit B, humanhuman

TSL 3

Gene LRRC8B, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC8B-204ENST00000449440 PTGER2P43116 358 aa32.6■■■□□ 2.81
LRRC8B-204ENST00000449440 SMARCC1Q92922 1105 aaPredicted RBP32.6■■■□□ 2.81
LRRC8B-204ENST00000449440 WDR43Q15061 677 aaKnown RBP eCLIP32.59■■■□□ 2.81
LRRC8B-204ENST00000449440 SLC27A3Q5K4L6 730 aa32.59■■■□□ 2.81
LRRC8B-204ENST00000449440 IL17REQ8NFR9 667 aa32.59■■■□□ 2.81
LRRC8B-204ENST00000449440 CCNL1Q9UK58 526 aaPredicted RBP32.59■■■□□ 2.81
LRRC8B-204ENST00000449440 ADAMTS8Q9UP79 889 aa32.58■■■□□ 2.81
LRRC8B-204ENST00000449440 SCN11AQ9UI33 1791 aa32.58■■■□□ 2.81
LRRC8B-204ENST00000449440 NEFMP07197 916 aa32.57■■■□□ 2.8
LRRC8B-204ENST00000449440 PNNQ9H307 717 aaKnown RBP32.57■■■□□ 2.8
LRRC8B-204ENST00000449440 SLC52A2Q9HAB3 445 aa32.57■■■□□ 2.8
LRRC8B-204ENST00000449440 LY75O60449 1722 aa32.56■■■□□ 2.8
LRRC8B-204ENST00000449440 CCDC146Q8IYE0 955 aa32.54■■■□□ 2.8
LRRC8B-204ENST00000449440 MAPK8IP3Q9UPT6 1336 aa32.53■■■□□ 2.8
LRRC8B-204ENST00000449440 ADAMTS7Q9UKP4 1686 aa32.53■■■□□ 2.8
LRRC8B-204ENST00000449440 LOC102724428A0A0B4J2F2 783 aa32.51■■■□□ 2.79
LRRC8B-204ENST00000449440 SIK1P57059 783 aa32.51■■■□□ 2.79
LRRC8B-204ENST00000449440 NFE2L2Q16236 605 aa32.51■■■□□ 2.79
LRRC8B-204ENST00000449440 MCM10Q7L590 875 aa32.51■■■□□ 2.79
LRRC8B-204ENST00000449440 MRC1P22897 1456 aa32.5■■■□□ 2.79
LRRC8B-204ENST00000449440 DCTN1Q14203 1278 aa32.5■■■□□ 2.79
LRRC8B-204ENST00000449440 ZNF827Q17R98 1081 aa32.5■■■□□ 2.79
LRRC8B-204ENST00000449440 PAPPAQ13219 1627 aa32.49■■■□□ 2.79
LRRC8B-204ENST00000449440 RTF1Q92541 710 aaKnown RBP32.49■■■□□ 2.79
LRRC8B-204ENST00000449440 FHDC1Q9C0D6 1143 aaPredicted RBP32.49■■■□□ 2.79
LRRC8B-204ENST00000449440 MRS2Q9HD23 443 aa32.49■■■□□ 2.79
LRRC8B-204ENST00000449440 CEMIPQ8WUJ3 1361 aa32.48■■■□□ 2.79
LRRC8B-204ENST00000449440 SLC39A6Q13433 755 aa32.48■■■□□ 2.79
LRRC8B-204ENST00000449440 RBM42Q9BTD8 480 aaKnown RBP32.48■■■□□ 2.79
LRRC8B-204ENST00000449440 MTFR1LQ9H019 292 aa32.48■■■□□ 2.79
LRRC8B-204ENST00000449440 VIRMAQ69YN4 1812 aaKnown RBP32.47■■■□□ 2.79
LRRC8B-204ENST00000449440 TEFQ10587 303 aa32.47■■■□□ 2.79
LRRC8B-204ENST00000449440 AKT1S1Q96B36 256 aa32.47■■■□□ 2.79
LRRC8B-204ENST00000449440 SLC4A9Q96Q91 983 aa32.47■■■□□ 2.79
LRRC8B-204ENST00000449440 HTATSF1O43719 755 aaKnown RBP32.46■■■□□ 2.79
LRRC8B-204ENST00000449440 PTCD1O75127 700 aaKnown RBP32.46■■■□□ 2.79
LRRC8B-204ENST00000449440 RUNDC1Q96C34 613 aa32.46■■■□□ 2.79
LRRC8B-204ENST00000449440 SYT17Q9BSW7 474 aa32.46■■■□□ 2.79
LRRC8B-204ENST00000449440 ATP6V1AP38606 617 aa32.45■■■□□ 2.79
LRRC8B-204ENST00000449440 ITPK1Q13572 414 aa32.45■■■□□ 2.79
LRRC8B-204ENST00000449440 SGIP1Q9BQI5 828 aa32.45■■■□□ 2.79
LRRC8B-204ENST00000449440 RRP7AQ9Y3A4 280 aaKnown RBP32.43■■■□□ 2.78
LRRC8B-204ENST00000449440 TMPOP42166 694 aaKnown RBP32.42■■■□□ 2.78
LRRC8B-204ENST00000449440 LINC00116Q8NCU8 138 aa32.42■■■□□ 2.78
LRRC8B-204ENST00000449440 PNISRQ8TF01 805 aaKnown RBP32.42■■■□□ 2.78
LRRC8B-204ENST00000449440 RIPK4P57078 832 aa32.41■■■□□ 2.78
LRRC8B-204ENST00000449440 UTRNP46939 3433 aa32.41■■■□□ 2.78
LRRC8B-204ENST00000449440 THUMPD2Q9BTF0 503 aaKnown RBP32.4■■■□□ 2.78
LRRC8B-204ENST00000449440 NEUROD2Q15784 382 aa32.39■■■□□ 2.78
LRRC8B-204ENST00000449440 TFCP2L1Q9NZI6 479 aa32.39■■■□□ 2.78
LRRC8B-204ENST00000449440 DLG5Q8TDM6 1919 aa32.38■■■□□ 2.77
LRRC8B-204ENST00000449440 C5P01031 1676 aa32.37■■■□□ 2.77
LRRC8B-204ENST00000449440 ARXQ96QS3 562 aa32.37■■■□□ 2.77
LRRC8B-204ENST00000449440 BTBD11A6QL63 1104 aa32.36■■■□□ 2.77
LRRC8B-204ENST00000449440 SIPA1L3O60292 1781 aaPredicted RBP32.35■■■□□ 2.77
LRRC8B-204ENST00000449440 KCNQ3O43525 872 aa32.35■■■□□ 2.77
LRRC8B-204ENST00000449440 ZNF790Q6PG37 636 aa32.35■■■□□ 2.77
LRRC8B-204ENST00000449440 TAF1LQ8IZX4 1826 aa32.35■■■□□ 2.77
LRRC8B-204ENST00000449440 TTC5Q8N0Z6 440 aa32.34■■■□□ 2.77
LRRC8B-204ENST00000449440 KCPQ6ZWJ8 1503 aa32.33■■■□□ 2.77
LRRC8B-204ENST00000449440 PNPLA7Q6ZV29 1317 aa32.32■■■□□ 2.76
LRRC8B-204ENST00000449440 C4BP0C0L5 1744 aa32.32■■■□□ 2.76
LRRC8B-204ENST00000449440 APAF1O14727 1248 aa32.32■■■□□ 2.76
LRRC8B-204ENST00000449440 HMGB2P26583 209 aaKnown RBP32.32■■■□□ 2.76
LRRC8B-204ENST00000449440 TAF7Q15545 349 aaPredicted RBP32.32■■■□□ 2.76
LRRC8B-204ENST00000449440 SMIM5Q71RC9 77 aa32.32■■■□□ 2.76
LRRC8B-204ENST00000449440 AK7Q96M32 723 aa32.32■■■□□ 2.76
LRRC8B-204ENST00000449440 MIS18AQ9NYP9 233 aa32.32■■■□□ 2.76
LRRC8B-204ENST00000449440 AMIGO3Q86WK7 504 aa32.31■■■□□ 2.76
LRRC8B-204ENST00000449440 ZNF496Q96IT1 587 aaPredicted RBP32.31■■■□□ 2.76
LRRC8B-204ENST00000449440 DNAJC10Q8IXB1 793 aa32.3■■■□□ 2.76
LRRC8B-204ENST00000449440 TRIM35Q9UPQ4 493 aa32.3■■■□□ 2.76
LRRC8B-204ENST00000449440 DIEXFQ68CQ4 756 aaKnown RBP32.29■■■□□ 2.76
LRRC8B-204ENST00000449440 ZNF784Q8NCA9 323 aaPredicted RBP32.29■■■□□ 2.76
LRRC8B-204ENST00000449440 ZNF831Q5JPB2 1677 aa32.28■■■□□ 2.76
LRRC8B-204ENST00000449440 SENP3-EIF4A1A0A087X0R7 540 aa32.28■■■□□ 2.76
LRRC8B-204ENST00000449440 LMOD3Q0VAK6 560 aa32.28■■■□□ 2.76
LRRC8B-204ENST00000449440 COL23A1Q86Y22 540 aaPredicted RBP32.27■■■□□ 2.76
LRRC8B-204ENST00000449440 KLHL34Q8N239 644 aa32.27■■■□□ 2.76
LRRC8B-204ENST00000449440 TUBGCP6Q96RT7 1819 aa32.26■■■□□ 2.76
LRRC8B-204ENST00000449440 GNPATO15228 680 aa32.26■■■□□ 2.75
LRRC8B-204ENST00000449440 FAM9BQ8IZU0 186 aa32.25■■■□□ 2.75
LRRC8B-204ENST00000449440 VSIG10Q8N0Z9 540 aa32.25■■■□□ 2.75
LRRC8B-204ENST00000449440 TJP1Q07157 1748 aa32.25■■■□□ 2.75
LRRC8B-204ENST00000449440 UBR2Q8IWV8 1755 aa32.24■■■□□ 2.75
LRRC8B-204ENST00000449440 MSH5O43196 834 aa32.24■■■□□ 2.75
LRRC8B-204ENST00000449440 PHF14O94880 888 aa32.24■■■□□ 2.75
LRRC8B-204ENST00000449440 RC3H1Q5TC82 1133 aaKnown RBP32.24■■■□□ 2.75
LRRC8B-204ENST00000449440 FMNL2Q96PY5 1086 aa32.24■■■□□ 2.75
LRRC8B-204ENST00000449440 HEG1Q9ULI3 1381 aa32.23■■■□□ 2.75
LRRC8B-204ENST00000449440 CRKLP46109 303 aaKnown RBP32.23■■■□□ 2.75
LRRC8B-204ENST00000449440 CNTNAP4Q9C0A0 1308 aa32.23■■■□□ 2.75
LRRC8B-204ENST00000449440 CYP19A1P11511 503 aaPredicted RBP32.22■■■□□ 2.75
LRRC8B-204ENST00000449440 COL5A3P25940 1745 aaPredicted RBP32.22■■■□□ 2.75
LRRC8B-204ENST00000449440 QSER1Q2KHR3 1735 aa32.21■■■□□ 2.75
LRRC8B-204ENST00000449440 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.21■■■□□ 2.75
LRRC8B-204ENST00000449440 INTS5Q6P9B9 1019 aaKnown RBP32.2■■■□□ 2.75
LRRC8B-204ENST00000449440 SLC16A10Q8TF71 515 aa32.2■■■□□ 2.75
LRRC8B-204ENST00000449440 FLAD1Q8NFF5 587 aa32.19■■■□□ 2.74
LRRC8B-204ENST00000449440 CICQ96RK0 1608 aaPredicted RBP32.18■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms