RNA–Protein interactions for RNA: ENST00000448572.1

SSBP3-209, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 454 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-209ENST00000448572 AMOTQ4VCS5 1084 aa14.21□□□□□ -0.13
SSBP3-209ENST00000448572 C16orf71Q8IYS4 520 aaPredicted RBP14.21□□□□□ -0.13
SSBP3-209ENST00000448572 DCAF5Q96JK2 942 aa14.21□□□□□ -0.13
SSBP3-209ENST00000448572 EYA1Q99502 592 aa14.21□□□□□ -0.13
SSBP3-209ENST00000448572 BCS1LQ9Y276 419 aa14.21□□□□□ -0.13
SSBP3-209ENST00000448572 PARP3Q9Y6F1 533 aa14.21□□□□□ -0.13
SSBP3-209ENST00000448572 PLEKHO1Q53GL0 409 aaPredicted RBP14.2□□□□□ -0.14
SSBP3-209ENST00000448572 ASAP1Q9ULH1 1129 aa14.2□□□□□ -0.14
SSBP3-209ENST00000448572 CNTNAP4Q9C0A0 1308 aa14.18□□□□□ -0.14
SSBP3-209ENST00000448572 KIF3CO14782 793 aa14.18□□□□□ -0.14
SSBP3-209ENST00000448572 ARHGAP27Q6ZUM4 889 aa14.18□□□□□ -0.14
SSBP3-209ENST00000448572 RBM42Q9BTD8 480 aaKnown RBP14.18□□□□□ -0.14
SSBP3-209ENST00000448572 CARD14Q9BXL6 1004 aa14.18□□□□□ -0.14
SSBP3-209ENST00000448572 ATG3Q9NT62 314 aa14.18□□□□□ -0.14
SSBP3-209ENST00000448572 UBR3Q6ZT12 1888 aa14.18□□□□□ -0.14
SSBP3-209ENST00000448572 CICQ96RK0 1608 aaPredicted RBP14.18□□□□□ -0.14
SSBP3-209ENST00000448572 KDM2BQ8NHM5 1336 aa14.17□□□□□ -0.14
SSBP3-209ENST00000448572 RPS6KA4O75676 772 aa14.17□□□□□ -0.14
SSBP3-209ENST00000448572 FCHSD2O94868 740 aa14.17□□□□□ -0.14
SSBP3-209ENST00000448572 CABP4P57796 275 aa14.17□□□□□ -0.14
SSBP3-209ENST00000448572 ITPK1Q13572 414 aa14.17□□□□□ -0.14
SSBP3-209ENST00000448572 C1orf141Q5JVX7 400 aa14.17□□□□□ -0.14
SSBP3-209ENST00000448572 POLKQ9UBT6 870 aa14.17□□□□□ -0.14
SSBP3-209ENST00000448572 WWC3Q9ULE0 1092 aa14.17□□□□□ -0.14
SSBP3-209ENST00000448572 ITGB4P16144 1822 aa14.16□□□□□ -0.14
SSBP3-209ENST00000448572 AMIGO3Q86WK7 504 aa14.16□□□□□ -0.14
SSBP3-209ENST00000448572 PIM2Q9P1W9 311 aa14.16□□□□□ -0.14
SSBP3-209ENST00000448572 PXDNLA1KZ92 1463 aa14.16□□□□□ -0.14
SSBP3-209ENST00000448572 C10orf71Q711Q0 1435 aa14.15□□□□□ -0.14
SSBP3-209ENST00000448572 TOGARAM1Q9Y4F4 1720 aa14.15□□□□□ -0.14
SSBP3-209ENST00000448572 RBM46Q8TBY0 533 aaKnown RBP14.15□□□□□ -0.14
SSBP3-209ENST00000448572 ARHGEF1Q92888 912 aaKnown RBP14.15□□□□□ -0.14
SSBP3-209ENST00000448572 CEP350Q5VT06 3117 aa14.15□□□□□ -0.14
SSBP3-209ENST00000448572 KDRP35968 1356 aa14.14□□□□□ -0.15
SSBP3-209ENST00000448572 A0A0G2JLW4 131 aa14.14□□□□□ -0.15
SSBP3-209ENST00000448572 FSTL1Q12841 308 aa14.14□□□□□ -0.15
SSBP3-209ENST00000448572 EIF4A2Q14240 407 aaKnown RBP14.14□□□□□ -0.15
SSBP3-209ENST00000448572 ANKRD26Q9UPS8 1709 aa14.13□□□□□ -0.15
SSBP3-209ENST00000448572 GYS1P13807 737 aa14.13□□□□□ -0.15
SSBP3-209ENST00000448572 MTHFSP49914 203 aa14.13□□□□□ -0.15
SSBP3-209ENST00000448572 DALRD3Q5D0E6 543 aaKnown RBP14.13□□□□□ -0.15
SSBP3-209ENST00000448572 ZNF530Q6P9A1 599 aaPredicted RBP14.13□□□□□ -0.15
SSBP3-209ENST00000448572 ZNF831Q5JPB2 1677 aa14.13□□□□□ -0.15
SSBP3-209ENST00000448572 DPEP1P16444 411 aa14.12□□□□□ -0.15
SSBP3-209ENST00000448572 MAP2P11137 1827 aaKnown RBP14.12□□□□□ -0.15
SSBP3-209ENST00000448572 ZC3H4Q9UPT8 1303 aaKnown RBP14.12□□□□□ -0.15
SSBP3-209ENST00000448572 TNNT2P45379 298 aaPredicted RBP14.11□□□□□ -0.15
SSBP3-209ENST00000448572 SMIM5Q71RC9 77 aa14.11□□□□□ -0.15
SSBP3-209ENST00000448572 POLR3GLQ9BT43 218 aa14.11□□□□□ -0.15
SSBP3-209ENST00000448572 CLSPNQ9HAW4 1339 aa14.11□□□□□ -0.15
SSBP3-209ENST00000448572 ZPR1O75312 459 aa14.1□□□□□ -0.15
SSBP3-209ENST00000448572 C9orf131Q5VYM1 1079 aa14.1□□□□□ -0.15
SSBP3-209ENST00000448572 PTCD1O75127 700 aaKnown RBP14.09□□□□□ -0.15
SSBP3-209ENST00000448572 CRKLP46109 303 aaKnown RBP14.09□□□□□ -0.15
SSBP3-209ENST00000448572 C4AP0C0L4 1744 aa14.09□□□□□ -0.15
SSBP3-209ENST00000448572 KIF13BQ9NQT8 1826 aa14.08□□□□□ -0.15
SSBP3-209ENST00000448572 TRIM26Q12899 539 aaPredicted RBP14.08□□□□□ -0.16
SSBP3-209ENST00000448572 NMRK2Q9NPI5 230 aa14.08□□□□□ -0.16
SSBP3-209ENST00000448572 RNF181Q9P0P0 153 aa14.08□□□□□ -0.16
SSBP3-209ENST00000448572 USP42Q9H9J4 1324 aaKnown RBP14.08□□□□□ -0.16
SSBP3-209ENST00000448572 MORC1Q86VD1 984 aa14.07□□□□□ -0.16
SSBP3-209ENST00000448572 SMC1BQ8NDV3 1235 aa14.07□□□□□ -0.16
SSBP3-209ENST00000448572 EIF4G2P78344 907 aaKnown RBP eCLIP14.06□□□□□ -0.16
SSBP3-209ENST00000448572 DNAJC5GQ8N7S2 189 aa14.06□□□□□ -0.16
SSBP3-209ENST00000448572 NFATC2IPQ8NCF5 419 aa14.06□□□□□ -0.16
SSBP3-209ENST00000448572 KLRG1Q96E93 195 aa14.06□□□□□ -0.16
SSBP3-209ENST00000448572 SLC4A9Q96Q91 983 aa14.06□□□□□ -0.16
SSBP3-209ENST00000448572 AKAP4Q5JQC9 854 aa14.05□□□□□ -0.16
SSBP3-209ENST00000448572 PDZRN3Q9UPQ7 1066 aa14.05□□□□□ -0.16
SSBP3-209ENST00000448572 KNSTRNQ9Y448 316 aa14.05□□□□□ -0.16
SSBP3-209ENST00000448572 KCNA3P22001 575 aa14.04□□□□□ -0.16
SSBP3-209ENST00000448572 KDM6AO15550 1401 aaPredicted RBP14.04□□□□□ -0.16
SSBP3-209ENST00000448572 FKBP8Q14318 412 aa14.03□□□□□ -0.16
SSBP3-209ENST00000448572 SULT6B1Q6IMI4 303 aa14.03□□□□□ -0.16
SSBP3-209ENST00000448572 NPM2Q86SE8 214 aaKnown RBP14.03□□□□□ -0.16
SSBP3-209ENST00000448572 JMYQ8N9B5 988 aa14.03□□□□□ -0.16
SSBP3-209ENST00000448572 PANK3Q9H999 370 aa14.03□□□□□ -0.16
SSBP3-209ENST00000448572 COL5A3P25940 1745 aaPredicted RBP14.02□□□□□ -0.16
SSBP3-209ENST00000448572 VEGFAP15692 232 aaPredicted RBP14.02□□□□□ -0.17
SSBP3-209ENST00000448572 LMNB1P20700 586 aa14.02□□□□□ -0.17
SSBP3-209ENST00000448572 DPY19L2Q6NUT2 758 aa14.02□□□□□ -0.17
SSBP3-209ENST00000448572 VSIG10Q8N0Z9 540 aa14.02□□□□□ -0.17
SSBP3-209ENST00000448572 N4BP2Q86UW6 1770 aaPredicted RBP14.01□□□□□ -0.17
SSBP3-209ENST00000448572 A0A087WZG4 1122 aa14.01□□□□□ -0.17
SSBP3-209ENST00000448572 POLRMTO00411 1230 aaKnown RBP14.01□□□□□ -0.17
SSBP3-209ENST00000448572 TM4SF1P30408 202 aa14.01□□□□□ -0.17
SSBP3-209ENST00000448572 TTLL6Q8N841 843 aa14.01□□□□□ -0.17
SSBP3-209ENST00000448572 SLC52A2Q9HAB3 445 aa14.01□□□□□ -0.17
SSBP3-209ENST00000448572 RRAGCQ9HB90 399 aa14.01□□□□□ -0.17
SSBP3-209ENST00000448572 SRP68Q9UHB9 627 aaKnown RBP14.01□□□□□ -0.17
SSBP3-209ENST00000448572 NARFQ9UHQ1 456 aa14.01□□□□□ -0.17
SSBP3-209ENST00000448572 ARFGEF1Q9Y6D6 1849 aa14□□□□□ -0.17
SSBP3-209ENST00000448572 H0YIN7 160 aa14□□□□□ -0.17
SSBP3-209ENST00000448572 STARD3NLO95772 234 aa14□□□□□ -0.17
SSBP3-209ENST00000448572 DDR1Q08345 913 aa14□□□□□ -0.17
SSBP3-209ENST00000448572 USPL1Q5W0Q7 1092 aa14□□□□□ -0.17
SSBP3-209ENST00000448572 KIAA1551Q9HCM1 1747 aa14□□□□□ -0.17
SSBP3-209ENST00000448572 KCPQ6ZWJ8 1503 aa14□□□□□ -0.17
SSBP3-209ENST00000448572 SOS1Q07889 1333 aaPredicted RBP13.99□□□□□ -0.17
SSBP3-209ENST00000448572 GLTPD2A6NH11 291 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms