RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 NFE2L2Q16236 605 aa18.52■□□□□ 0.56
GTF3C3-206ENST00000448539 CCDC146Q8IYE0 955 aa18.52■□□□□ 0.56
GTF3C3-206ENST00000448539 ATG3Q9NT62 314 aa18.52■□□□□ 0.56
GTF3C3-206ENST00000448539 STK32BQ9NY57 414 aa18.52■□□□□ 0.56
GTF3C3-206ENST00000448539 CCDC184Q52MB2 194 aa18.51■□□□□ 0.55
GTF3C3-206ENST00000448539 IL17REQ8NFR9 667 aa18.51■□□□□ 0.55
GTF3C3-206ENST00000448539 RUNDC1Q96C34 613 aa18.51■□□□□ 0.55
GTF3C3-206ENST00000448539 ANO8Q9HCE9 1232 aaPredicted RBP18.51■□□□□ 0.55
GTF3C3-206ENST00000448539 LRRC4BQ9NT99 713 aa18.51■□□□□ 0.55
GTF3C3-206ENST00000448539 LOC102724428A0A0B4J2F2 783 aa18.5■□□□□ 0.55
GTF3C3-206ENST00000448539 KCNQ4P56696 695 aa18.5■□□□□ 0.55
GTF3C3-206ENST00000448539 SIK1P57059 783 aa18.5■□□□□ 0.55
GTF3C3-206ENST00000448539 RBM42Q9BTD8 480 aaKnown RBP18.5■□□□□ 0.55
GTF3C3-206ENST00000448539 MCM10Q7L590 875 aa18.49■□□□□ 0.55
GTF3C3-206ENST00000448539 SCN11AQ9UI33 1791 aa18.49■□□□□ 0.55
GTF3C3-206ENST00000448539 ATP6V1AP38606 617 aa18.48■□□□□ 0.55
GTF3C3-206ENST00000448539 MRC1P22897 1456 aa18.47■□□□□ 0.55
GTF3C3-206ENST00000448539 CEMIPQ8WUJ3 1361 aa18.47■□□□□ 0.55
GTF3C3-206ENST00000448539 PTCD1O75127 700 aaKnown RBP18.47■□□□□ 0.55
GTF3C3-206ENST00000448539 RIPK4P57078 832 aa18.47■□□□□ 0.55
GTF3C3-206ENST00000448539 LMOD3Q0VAK6 560 aa18.47■□□□□ 0.55
GTF3C3-206ENST00000448539 DCTN1Q14203 1278 aa18.47■□□□□ 0.55
GTF3C3-206ENST00000448539 SLC15A2Q16348 729 aa18.47■□□□□ 0.55
GTF3C3-206ENST00000448539 TTC5Q8N0Z6 440 aa18.47■□□□□ 0.55
GTF3C3-206ENST00000448539 CASZ1Q86V15 1759 aa18.47■□□□□ 0.55
GTF3C3-206ENST00000448539 LY75O60449 1722 aa18.46■□□□□ 0.55
GTF3C3-206ENST00000448539 TMPOP42166 694 aaKnown RBP18.46■□□□□ 0.55
GTF3C3-206ENST00000448539 NEUROD2Q15784 382 aa18.46■□□□□ 0.55
GTF3C3-206ENST00000448539 DIEXFQ68CQ4 756 aaKnown RBP18.46■□□□□ 0.55
GTF3C3-206ENST00000448539 SPON1Q9HCB6 807 aa18.46■□□□□ 0.55
GTF3C3-206ENST00000448539 ADAMTS7Q9UKP4 1686 aa18.45■□□□□ 0.54
GTF3C3-206ENST00000448539 SLC39A6Q13433 755 aa18.45■□□□□ 0.54
GTF3C3-206ENST00000448539 PNISRQ8TF01 805 aaKnown RBP18.45■□□□□ 0.54
GTF3C3-206ENST00000448539 BTBD11A6QL63 1104 aa18.44■□□□□ 0.54
GTF3C3-206ENST00000448539 PDGFDQ9GZP0 370 aaPredicted RBP18.44■□□□□ 0.54
GTF3C3-206ENST00000448539 TFCP2L1Q9NZI6 479 aa18.44■□□□□ 0.54
GTF3C3-206ENST00000448539 RRP7AQ9Y3A4 280 aaKnown RBP18.44■□□□□ 0.54
GTF3C3-206ENST00000448539 ZNF827Q17R98 1081 aa18.43■□□□□ 0.54
GTF3C3-206ENST00000448539 AKT1S1Q96B36 256 aa18.43■□□□□ 0.54
GTF3C3-206ENST00000448539 AK7Q96M32 723 aa18.42■□□□□ 0.54
GTF3C3-206ENST00000448539 APAF1O14727 1248 aa18.41■□□□□ 0.54
GTF3C3-206ENST00000448539 ITPK1Q13572 414 aa18.41■□□□□ 0.54
GTF3C3-206ENST00000448539 TAF7Q15545 349 aaPredicted RBP18.41■□□□□ 0.54
GTF3C3-206ENST00000448539 ZNF790Q6PG37 636 aa18.41■□□□□ 0.54
GTF3C3-206ENST00000448539 PPP1R1BQ9UD71 204 aaPredicted RBP18.41■□□□□ 0.54
GTF3C3-206ENST00000448539 VIRMAQ69YN4 1812 aaKnown RBP18.4■□□□□ 0.54
GTF3C3-206ENST00000448539 FAM9BQ8IZU0 186 aa18.4■□□□□ 0.54
GTF3C3-206ENST00000448539 LINC00116Q8NCU8 138 aa18.4■□□□□ 0.54
GTF3C3-206ENST00000448539 THUMPD2Q9BTF0 503 aaKnown RBP18.4■□□□□ 0.54
GTF3C3-206ENST00000448539 PAPPAQ13219 1627 aa18.4■□□□□ 0.54
GTF3C3-206ENST00000448539 SLC4A9Q96Q91 983 aa18.39■□□□□ 0.53
GTF3C3-206ENST00000448539 MSH5O43196 834 aa18.38■□□□□ 0.53
GTF3C3-206ENST00000448539 ZBTB7AO95365 584 aa18.38■□□□□ 0.53
GTF3C3-206ENST00000448539 VSIG10Q8N0Z9 540 aa18.38■□□□□ 0.53
GTF3C3-206ENST00000448539 FMNL2Q96PY5 1086 aa18.38■□□□□ 0.53
GTF3C3-206ENST00000448539 C5P01031 1676 aa18.38■□□□□ 0.53
GTF3C3-206ENST00000448539 DLG5Q8TDM6 1919 aa18.37■□□□□ 0.53
GTF3C3-206ENST00000448539 CCER2I3L3R5 266 aa18.37■□□□□ 0.53
GTF3C3-206ENST00000448539 FLAD1Q8NFF5 587 aa18.37■□□□□ 0.53
GTF3C3-206ENST00000448539 ZNF496Q96IT1 587 aaPredicted RBP18.37■□□□□ 0.53
GTF3C3-206ENST00000448539 GNPATO15228 680 aa18.36■□□□□ 0.53
GTF3C3-206ENST00000448539 DNAJC10Q8IXB1 793 aa18.36■□□□□ 0.53
GTF3C3-206ENST00000448539 MIS18AQ9NYP9 233 aa18.36■□□□□ 0.53
GTF3C3-206ENST00000448539 ATF5Q9Y2D1 282 aaPredicted RBP18.36■□□□□ 0.53
GTF3C3-206ENST00000448539 C4BP0C0L5 1744 aa18.35■□□□□ 0.53
GTF3C3-206ENST00000448539 KCPQ6ZWJ8 1503 aa18.35■□□□□ 0.53
GTF3C3-206ENST00000448539 PNPLA7Q6ZV29 1317 aa18.35■□□□□ 0.53
GTF3C3-206ENST00000448539 CNTNAP4Q9C0A0 1308 aa18.35■□□□□ 0.53
GTF3C3-206ENST00000448539 KCNQ3O43525 872 aa18.35■□□□□ 0.53
GTF3C3-206ENST00000448539 PHF14O94880 888 aa18.35■□□□□ 0.53
GTF3C3-206ENST00000448539 RC3H1Q5TC82 1133 aaKnown RBP18.35■□□□□ 0.53
GTF3C3-206ENST00000448539 TEX13AQ9BXU3 409 aaPredicted RBP18.35■□□□□ 0.53
GTF3C3-206ENST00000448539 TRIM35Q9UPQ4 493 aa18.35■□□□□ 0.53
GTF3C3-206ENST00000448539 ZNF831Q5JPB2 1677 aa18.34■□□□□ 0.53
GTF3C3-206ENST00000448539 HEG1Q9ULI3 1381 aa18.34■□□□□ 0.53
GTF3C3-206ENST00000448539 STARD3NLO95772 234 aa18.34■□□□□ 0.53
GTF3C3-206ENST00000448539 CRKLP46109 303 aaKnown RBP18.34■□□□□ 0.53
GTF3C3-206ENST00000448539 TSPYL4Q9UJ04 414 aa18.34■□□□□ 0.53
GTF3C3-206ENST00000448539 RTCBQ9Y3I0 505 aaKnown RBP18.34■□□□□ 0.53
GTF3C3-206ENST00000448539 SIPA1L3O60292 1781 aaPredicted RBP18.34■□□□□ 0.53
GTF3C3-206ENST00000448539 TAF1LQ8IZX4 1826 aa18.33■□□□□ 0.53
GTF3C3-206ENST00000448539 SSFA2P28290 1259 aa18.33■□□□□ 0.52
GTF3C3-206ENST00000448539 PTGER2P43116 358 aa18.33■□□□□ 0.52
GTF3C3-206ENST00000448539 CALD1Q05682 793 aaKnown RBP18.33■□□□□ 0.52
GTF3C3-206ENST00000448539 BABAM1Q9NWV8 329 aa18.33■□□□□ 0.52
GTF3C3-206ENST00000448539 LAS1LQ9Y4W2 734 aaKnown RBP18.33■□□□□ 0.52
GTF3C3-206ENST00000448539 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.32■□□□□ 0.52
GTF3C3-206ENST00000448539 COL23A1Q86Y22 540 aaPredicted RBP18.32■□□□□ 0.52
GTF3C3-206ENST00000448539 PIAS4Q8N2W9 510 aaPredicted RBP18.32■□□□□ 0.52
GTF3C3-206ENST00000448539 SLC16A10Q8TF71 515 aa18.32■□□□□ 0.52
GTF3C3-206ENST00000448539 RPS6KA4O75676 772 aa18.31■□□□□ 0.52
GTF3C3-206ENST00000448539 SNRPA1P09661 255 aaKnown RBP18.31■□□□□ 0.52
GTF3C3-206ENST00000448539 CYP19A1P11511 503 aaPredicted RBP18.31■□□□□ 0.52
GTF3C3-206ENST00000448539 MIER1Q8N108 512 aa18.31■□□□□ 0.52
GTF3C3-206ENST00000448539 MTFR1LQ9H019 292 aa18.31■□□□□ 0.52
GTF3C3-206ENST00000448539 CCDC87Q9NVE4 849 aa18.31■□□□□ 0.52
GTF3C3-206ENST00000448539 SENP3-EIF4A1A0A087X0R7 540 aa18.3■□□□□ 0.52
GTF3C3-206ENST00000448539 TRAPPC3LQ5T215 181 aa18.3■□□□□ 0.52
GTF3C3-206ENST00000448539 UBR2Q8IWV8 1755 aa18.3■□□□□ 0.52
GTF3C3-206ENST00000448539 TJP1Q07157 1748 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms