RNA–Protein interactions for RNA: ENST00000448340.5

HLCS-205, Transcript of holocarboxylase synthetase, humanhuman

TSL 1 (best)

Gene HLCS, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-205ENST00000448340 PNPLA7Q6ZV29 1317 aa23.4■■□□□ 1.34
HLCS-205ENST00000448340 HSP90AB1P08238 724 aaKnown RBP23.4■■□□□ 1.34
HLCS-205ENST00000448340 AKAP4Q5JQC9 854 aa23.39■■□□□ 1.33
HLCS-205ENST00000448340 GOLGB1Q14789 3259 aaKnown RBP23.39■■□□□ 1.33
HLCS-205ENST00000448340 MAPK8IP3Q9UPT6 1336 aa23.38■■□□□ 1.33
HLCS-205ENST00000448340 CHD4Q14839 1912 aa23.37■■□□□ 1.33
HLCS-205ENST00000448340 KCNQ4P56696 695 aa23.37■■□□□ 1.33
HLCS-205ENST00000448340 GPR162Q16538 588 aa23.37■■□□□ 1.33
HLCS-205ENST00000448340 RUNDC1Q96C34 613 aa23.37■■□□□ 1.33
HLCS-205ENST00000448340 COL24A1Q17RW2 1714 aa23.36■■□□□ 1.33
HLCS-205ENST00000448340 KAT6BQ8WYB5 2073 aa23.36■■□□□ 1.33
HLCS-205ENST00000448340 PRIM1P49642 420 aaKnown RBP23.36■■□□□ 1.33
HLCS-205ENST00000448340 DCAF5Q96JK2 942 aa23.36■■□□□ 1.33
HLCS-205ENST00000448340 SENP3-EIF4A1A0A087X0R7 540 aa23.35■■□□□ 1.33
HLCS-205ENST00000448340 CCDC146Q8IYE0 955 aa23.35■■□□□ 1.33
HLCS-205ENST00000448340 DOT1LQ8TEK3 1739 aa23.33■■□□□ 1.33
HLCS-205ENST00000448340 GNAT3A8MTJ3 354 aa23.33■■□□□ 1.33
HLCS-205ENST00000448340 POLD1P28340 1107 aa23.33■■□□□ 1.33
HLCS-205ENST00000448340 NFE2L2Q16236 605 aa23.33■■□□□ 1.33
HLCS-205ENST00000448340 NLGN2Q8NFZ4 835 aa23.33■■□□□ 1.33
HLCS-205ENST00000448340 TFCP2L1Q9NZI6 479 aa23.33■■□□□ 1.33
HLCS-205ENST00000448340 QSER1Q2KHR3 1735 aa23.33■■□□□ 1.32
HLCS-205ENST00000448340 MPRIPQ6WCQ1 1025 aa23.32■■□□□ 1.32
HLCS-205ENST00000448340 KDM6AO15550 1401 aaPredicted RBP23.32■■□□□ 1.32
HLCS-205ENST00000448340 TOGARAM1Q9Y4F4 1720 aa23.31■■□□□ 1.32
HLCS-205ENST00000448340 ERVV-2B6SEH9 535 aa23.31■■□□□ 1.32
HLCS-205ENST00000448340 FAM9BQ8IZU0 186 aa23.31■■□□□ 1.32
HLCS-205ENST00000448340 SCN11AQ9UI33 1791 aa23.3■■□□□ 1.32
HLCS-205ENST00000448340 HTATSF1O43719 755 aaKnown RBP23.3■■□□□ 1.32
HLCS-205ENST00000448340 SYTL4Q96C24 671 aaPredicted RBP23.3■■□□□ 1.32
HLCS-205ENST00000448340 RNMTO43148 476 aaKnown RBP23.29■■□□□ 1.32
HLCS-205ENST00000448340 TMPOP42166 694 aaKnown RBP23.29■■□□□ 1.32
HLCS-205ENST00000448340 ITGB4P16144 1822 aa23.29■■□□□ 1.32
HLCS-205ENST00000448340 ADAMTS7Q9UKP4 1686 aa23.28■■□□□ 1.32
HLCS-205ENST00000448340 DLG5Q8TDM6 1919 aa23.28■■□□□ 1.32
HLCS-205ENST00000448340 RTF1Q92541 710 aaKnown RBP23.28■■□□□ 1.32
HLCS-205ENST00000448340 LGR6Q9HBX8 967 aa23.28■■□□□ 1.32
HLCS-205ENST00000448340 VIRMAQ69YN4 1812 aaKnown RBP23.28■■□□□ 1.32
HLCS-205ENST00000448340 KLHL34Q8N239 644 aa23.27■■□□□ 1.32
HLCS-205ENST00000448340 IL17REQ8NFR9 667 aa23.27■■□□□ 1.32
HLCS-205ENST00000448340 YBX3P16989 372 aaKnown RBP eCLIP23.26■■□□□ 1.31
HLCS-205ENST00000448340 RIPK4P57078 832 aa23.26■■□□□ 1.31
HLCS-205ENST00000448340 COL23A1Q86Y22 540 aaPredicted RBP23.26■■□□□ 1.31
HLCS-205ENST00000448340 TMOD3Q9NYL9 352 aa23.26■■□□□ 1.31
HLCS-205ENST00000448340 APAF1O14727 1248 aa23.25■■□□□ 1.31
HLCS-205ENST00000448340 GIGYF1O75420 1035 aaPredicted RBP23.25■■□□□ 1.31
HLCS-205ENST00000448340 CABP4P57796 275 aa23.25■■□□□ 1.31
HLCS-205ENST00000448340 CCNL1Q9UK58 526 aaPredicted RBP23.25■■□□□ 1.31
HLCS-205ENST00000448340 TUBGCP6Q96RT7 1819 aa23.24■■□□□ 1.31
HLCS-205ENST00000448340 PELP1Q8IZL8 1130 aaKnown RBP23.24■■□□□ 1.31
HLCS-205ENST00000448340 PIGBQ92521 554 aa23.24■■□□□ 1.31
HLCS-205ENST00000448340 LY75O60449 1722 aa23.24■■□□□ 1.31
HLCS-205ENST00000448340 CEMIPQ8WUJ3 1361 aa23.24■■□□□ 1.31
HLCS-205ENST00000448340 LMOD3Q0VAK6 560 aa23.23■■□□□ 1.31
HLCS-205ENST00000448340 SLC52A2Q9HAB3 445 aa23.23■■□□□ 1.31
HLCS-205ENST00000448340 RRP7AQ9Y3A4 280 aaKnown RBP23.23■■□□□ 1.31
HLCS-205ENST00000448340 MRC1P22897 1456 aa23.23■■□□□ 1.31
HLCS-205ENST00000448340 NEUROD2Q15784 382 aa23.22■■□□□ 1.31
HLCS-205ENST00000448340 MCM10Q7L590 875 aa23.22■■□□□ 1.31
HLCS-205ENST00000448340 NFATC2IPQ8NCF5 419 aa23.22■■□□□ 1.31
HLCS-205ENST00000448340 GRIN3BO60391 1043 aa23.21■■□□□ 1.31
HLCS-205ENST00000448340 TEFQ10587 303 aa23.2■■□□□ 1.3
HLCS-205ENST00000448340 DCTN1Q14203 1278 aa23.2■■□□□ 1.3
HLCS-205ENST00000448340 CEP350Q5VT06 3117 aa23.2■■□□□ 1.3
HLCS-205ENST00000448340 NCBP3Q53F19 620 aaKnown RBP23.19■■□□□ 1.3
HLCS-205ENST00000448340 SMARCC1Q92922 1105 aaPredicted RBP23.18■■□□□ 1.3
HLCS-205ENST00000448340 TRIM35Q9UPQ4 493 aa23.18■■□□□ 1.3
HLCS-205ENST00000448340 SIPA1L3O60292 1781 aaPredicted RBP23.17■■□□□ 1.3
HLCS-205ENST00000448340 MSL1Q68DK7 614 aa23.16■■□□□ 1.3
HLCS-205ENST00000448340 ATG3Q9NT62 314 aa23.16■■□□□ 1.3
HLCS-205ENST00000448340 MSH5O43196 834 aa23.15■■□□□ 1.3
HLCS-205ENST00000448340 THUMPD2Q9BTF0 503 aaKnown RBP23.15■■□□□ 1.3
HLCS-205ENST00000448340 ASAP1Q9ULH1 1129 aa23.15■■□□□ 1.3
HLCS-205ENST00000448340 TAF7Q15545 349 aaPredicted RBP23.14■■□□□ 1.29
HLCS-205ENST00000448340 CCDC27Q2M243 656 aa23.14■■□□□ 1.29
HLCS-205ENST00000448340 NGEFQ8N5V2 710 aa23.14■■□□□ 1.29
HLCS-205ENST00000448340 CD2APQ9Y5K6 639 aa23.14■■□□□ 1.29
HLCS-205ENST00000448340 PALLDQ8WX93 1383 aa23.14■■□□□ 1.29
HLCS-205ENST00000448340 BTBD11A6QL63 1104 aa23.12■■□□□ 1.29
HLCS-205ENST00000448340 AMIGO3Q86WK7 504 aa23.12■■□□□ 1.29
HLCS-205ENST00000448340 IFFO2Q5TF58 517 aa23.11■■□□□ 1.29
HLCS-205ENST00000448340 ATP10DQ9P241 1426 aa23.1■■□□□ 1.29
HLCS-205ENST00000448340 FLAD1Q8NFF5 587 aa23.1■■□□□ 1.29
HLCS-205ENST00000448340 CALD1Q05682 793 aaKnown RBP23.09■■□□□ 1.29
HLCS-205ENST00000448340 SLC39A6Q13433 755 aa23.09■■□□□ 1.29
HLCS-205ENST00000448340 ZNF790Q6PG37 636 aa23.08■■□□□ 1.29
HLCS-205ENST00000448340 WWC1Q8IX03 1113 aa23.08■■□□□ 1.29
HLCS-205ENST00000448340 TTC5Q8N0Z6 440 aa23.08■■□□□ 1.29
HLCS-205ENST00000448340 BABAM1Q9NWV8 329 aa23.08■■□□□ 1.29
HLCS-205ENST00000448340 ADCY9O60503 1353 aa23.08■■□□□ 1.29
HLCS-205ENST00000448340 LOC102724428A0A0B4J2F2 783 aa23.07■■□□□ 1.28
HLCS-205ENST00000448340 HMGB2P26583 209 aaKnown RBP23.07■■□□□ 1.28
HLCS-205ENST00000448340 SIK1P57059 783 aa23.07■■□□□ 1.28
HLCS-205ENST00000448340 SALL2Q9Y467 1007 aaPredicted RBP23.07■■□□□ 1.28
HLCS-205ENST00000448340 C5P01031 1676 aa23.06■■□□□ 1.28
HLCS-205ENST00000448340 UBR2Q8IWV8 1755 aa23.05■■□□□ 1.28
HLCS-205ENST00000448340 PTCD1O75127 700 aaKnown RBP23.05■■□□□ 1.28
HLCS-205ENST00000448340 RBM42Q9BTD8 480 aaKnown RBP23.05■■□□□ 1.28
HLCS-205ENST00000448340 MIS18AQ9NYP9 233 aa23.05■■□□□ 1.28
HLCS-205ENST00000448340 ZNF831Q5JPB2 1677 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms