RNA–Protein interactions for RNA: ENST00000448301.6

CTSS-202, Transcript of cathepsin S, humanhuman

TSL 2 BASIC

Gene CTSS, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-202ENST00000448301 MCM10Q7L590 875 aa18.45■□□□□ 0.54
CTSS-202ENST00000448301 CCDC125Q86Z20 511 aa18.45■□□□□ 0.54
CTSS-202ENST00000448301 TRIM35Q9UPQ4 493 aa18.45■□□□□ 0.54
CTSS-202ENST00000448301 DCTN1Q14203 1278 aa18.44■□□□□ 0.54
CTSS-202ENST00000448301 PTF1AQ7RTS3 328 aa18.44■□□□□ 0.54
CTSS-202ENST00000448301 KDM3BQ7LBC6 1761 aa18.44■□□□□ 0.54
CTSS-202ENST00000448301 UBR2Q8IWV8 1755 aa18.44■□□□□ 0.54
CTSS-202ENST00000448301 TEFQ10587 303 aa18.43■□□□□ 0.54
CTSS-202ENST00000448301 CCDC27Q2M243 656 aa18.43■□□□□ 0.54
CTSS-202ENST00000448301 NGEFQ8N5V2 710 aa18.43■□□□□ 0.54
CTSS-202ENST00000448301 PIGBQ92521 554 aa18.43■□□□□ 0.54
CTSS-202ENST00000448301 UPF1Q92900 1129 aaKnown RBP eCLIP18.43■□□□□ 0.54
CTSS-202ENST00000448301 NFATC2IPQ8NCF5 419 aa18.42■□□□□ 0.54
CTSS-202ENST00000448301 SF3B2Q13435 895 aaKnown RBP18.41■□□□□ 0.54
CTSS-202ENST00000448301 ZNF831Q5JPB2 1677 aa18.4■□□□□ 0.54
CTSS-202ENST00000448301 RREB1Q92766 1687 aa18.4■□□□□ 0.54
CTSS-202ENST00000448301 THUMPD2Q9BTF0 503 aaKnown RBP18.4■□□□□ 0.54
CTSS-202ENST00000448301 SENP3-EIF4A1A0A087X0R7 540 aa18.39■□□□□ 0.53
CTSS-202ENST00000448301 APBA3O96018 575 aa18.39■□□□□ 0.53
CTSS-202ENST00000448301 CICQ96RK0 1608 aaPredicted RBP18.39■□□□□ 0.53
CTSS-202ENST00000448301 PLSCR1O15162 318 aa18.38■□□□□ 0.53
CTSS-202ENST00000448301 TAF7Q15545 349 aaPredicted RBP18.38■□□□□ 0.53
CTSS-202ENST00000448301 WWC1Q8IX03 1113 aa18.38■□□□□ 0.53
CTSS-202ENST00000448301 SMARCC1Q92922 1105 aaPredicted RBP18.38■□□□□ 0.53
CTSS-202ENST00000448301 KCPQ6ZWJ8 1503 aa18.37■□□□□ 0.53
CTSS-202ENST00000448301 BAG6P46379 1132 aa18.37■□□□□ 0.53
CTSS-202ENST00000448301 CALD1Q05682 793 aaKnown RBP18.37■□□□□ 0.53
CTSS-202ENST00000448301 ATG3Q9NT62 314 aa18.37■□□□□ 0.53
CTSS-202ENST00000448301 PALLDQ8WX93 1383 aa18.37■□□□□ 0.53
CTSS-202ENST00000448301 BTBD11A6QL63 1104 aa18.36■□□□□ 0.53
CTSS-202ENST00000448301 ASAP1Q9ULH1 1129 aa18.36■□□□□ 0.53
CTSS-202ENST00000448301 SALL2Q9Y467 1007 aaPredicted RBP18.36■□□□□ 0.53
CTSS-202ENST00000448301 TAF1LQ8IZX4 1826 aa18.36■□□□□ 0.53
CTSS-202ENST00000448301 NUP188Q5SRE5 1749 aa18.35■□□□□ 0.53
CTSS-202ENST00000448301 BABAM1Q9NWV8 329 aa18.35■□□□□ 0.53
CTSS-202ENST00000448301 C5P01031 1676 aa18.35■□□□□ 0.53
CTSS-202ENST00000448301 ZNF521Q96K83 1311 aa18.35■□□□□ 0.53
CTSS-202ENST00000448301 TJP1Q07157 1748 aa18.35■□□□□ 0.53
CTSS-202ENST00000448301 ZNF790Q6PG37 636 aa18.34■□□□□ 0.53
CTSS-202ENST00000448301 COL5A3P25940 1745 aaPredicted RBP18.34■□□□□ 0.53
CTSS-202ENST00000448301 SLC39A6Q13433 755 aa18.33■□□□□ 0.53
CTSS-202ENST00000448301 PPP4R3CPQ6ZMV5 832 aa18.33■□□□□ 0.53
CTSS-202ENST00000448301 WDR63Q8IWG1 891 aa18.33■□□□□ 0.53
CTSS-202ENST00000448301 TTC5Q8N0Z6 440 aa18.33■□□□□ 0.53
CTSS-202ENST00000448301 IL16Q14005 1332 aa18.33■□□□□ 0.52
CTSS-202ENST00000448301 SOCS7O14512 581 aa18.32■□□□□ 0.52
CTSS-202ENST00000448301 EN1Q05925 392 aaPredicted RBP18.32■□□□□ 0.52
CTSS-202ENST00000448301 DEFB132Q7Z7B7 95 aa18.32■□□□□ 0.52
CTSS-202ENST00000448301 CFAP44Q96MT7 982 aa18.32■□□□□ 0.52
CTSS-202ENST00000448301 CAMKK2Q96RR4 588 aa18.32■□□□□ 0.52
CTSS-202ENST00000448301 IFT57Q9NWB7 429 aa18.32■□□□□ 0.52
CTSS-202ENST00000448301 LAMB4A4D0S4 1761 aa18.32■□□□□ 0.52
CTSS-202ENST00000448301 ZNF853P0CG23 659 aa18.32■□□□□ 0.52
CTSS-202ENST00000448301 GNAI1P63096 354 aa18.32■□□□□ 0.52
CTSS-202ENST00000448301 HNRNPUQ00839 825 aaKnown RBP eCLIP18.32■□□□□ 0.52
CTSS-202ENST00000448301 CHL1O00533 1208 aa18.31■□□□□ 0.52
CTSS-202ENST00000448301 EZH2Q15910 746 aaKnown RBP18.31■□□□□ 0.52
CTSS-202ENST00000448301 TXNRD1Q16881 649 aa18.31■□□□□ 0.52
CTSS-202ENST00000448301 SLC27A3Q5K4L6 730 aa18.31■□□□□ 0.52
CTSS-202ENST00000448301 MIS18AQ9NYP9 233 aa18.31■□□□□ 0.52
CTSS-202ENST00000448301 TSPYL4Q9UJ04 414 aa18.31■□□□□ 0.52
CTSS-202ENST00000448301 LOC102724428A0A0B4J2F2 783 aa18.3■□□□□ 0.52
CTSS-202ENST00000448301 SIK1P57059 783 aa18.3■□□□□ 0.52
CTSS-202ENST00000448301 LAS1LQ9Y4W2 734 aaKnown RBP18.3■□□□□ 0.52
CTSS-202ENST00000448301 KCNQ3O43525 872 aa18.29■□□□□ 0.52
CTSS-202ENST00000448301 PROM2Q8N271 834 aa18.29■□□□□ 0.52
CTSS-202ENST00000448301 RBM42Q9BTD8 480 aaKnown RBP18.29■□□□□ 0.52
CTSS-202ENST00000448301 CCNL1Q9UK58 526 aaPredicted RBP18.29■□□□□ 0.52
CTSS-202ENST00000448301 HEG1Q9ULI3 1381 aa18.29■□□□□ 0.52
CTSS-202ENST00000448301 PTCD1O75127 700 aaKnown RBP18.28■□□□□ 0.52
CTSS-202ENST00000448301 VSIG10Q8N0Z9 540 aa18.28■□□□□ 0.52
CTSS-202ENST00000448301 ZNF496Q96IT1 587 aaPredicted RBP18.28■□□□□ 0.52
CTSS-202ENST00000448301 FMNL2Q96PY5 1086 aa18.28■□□□□ 0.52
CTSS-202ENST00000448301 C4BP0C0L5 1744 aa18.27■□□□□ 0.52
CTSS-202ENST00000448301 SLC4A9Q96Q91 983 aa18.27■□□□□ 0.52
CTSS-202ENST00000448301 MBIPQ9NS73 344 aa18.27■□□□□ 0.52
CTSS-202ENST00000448301 HMGB2P26583 209 aaKnown RBP18.26■□□□□ 0.51
CTSS-202ENST00000448301 ATP6V1AP38606 617 aa18.26■□□□□ 0.51
CTSS-202ENST00000448301 EIF4A1P60842 406 aaKnown RBP18.26■□□□□ 0.51
CTSS-202ENST00000448301 GOLGA2Q08379 1002 aa18.26■□□□□ 0.51
CTSS-202ENST00000448301 LRRC4BQ9NT99 713 aa18.26■□□□□ 0.51
CTSS-202ENST00000448301 ZBED9Q6R2W3 1325 aa18.26■□□□□ 0.51
CTSS-202ENST00000448301 QSER1Q2KHR3 1735 aa18.25■□□□□ 0.51
CTSS-202ENST00000448301 FANCIQ9NVI1 1328 aa18.24■□□□□ 0.51
CTSS-202ENST00000448301 ITPK1Q13572 414 aa18.23■□□□□ 0.51
CTSS-202ENST00000448301 MYH16Q9H6N6 1097 aa18.23■□□□□ 0.51
CTSS-202ENST00000448301 SPINK5Q9NQ38 1064 aaPredicted RBP18.23■□□□□ 0.51
CTSS-202ENST00000448301 TUBGCP6Q96RT7 1819 aa18.23■□□□□ 0.51
CTSS-202ENST00000448301 MYH14Q7Z406 1995 aaKnown RBP18.23■□□□□ 0.51
CTSS-202ENST00000448301 UBR3Q6ZT12 1888 aa18.23■□□□□ 0.51
CTSS-202ENST00000448301 E9PSI1 815 aa18.23■□□□□ 0.51
CTSS-202ENST00000448301 SNRPA1P09661 255 aaKnown RBP18.23■□□□□ 0.51
CTSS-202ENST00000448301 KCNQ4P56696 695 aa18.23■□□□□ 0.51
CTSS-202ENST00000448301 TSR2Q969E8 191 aaKnown RBP18.23■□□□□ 0.51
CTSS-202ENST00000448301 TEX13AQ9BXU3 409 aaPredicted RBP18.23■□□□□ 0.51
CTSS-202ENST00000448301 DNAJC10Q8IXB1 793 aa18.22■□□□□ 0.51
CTSS-202ENST00000448301 GIGYF1O75420 1035 aaPredicted RBP18.21■□□□□ 0.51
CTSS-202ENST00000448301 SLFN5Q08AF3 891 aa18.21■□□□□ 0.51
CTSS-202ENST00000448301 LINC00116Q8NCU8 138 aa18.21■□□□□ 0.51
CTSS-202ENST00000448301 CNTNAP4Q9C0A0 1308 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms