RNA–Protein interactions for RNA: ENST00000447696.5

MRPL28-205, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 3

Gene MRPL28, Length 722 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-205ENST00000447696 ASAP1Q9ULH1 1129 aa32.29■■■□□ 2.76
MRPL28-205ENST00000447696 TAF1LQ8IZX4 1826 aa32.28■■■□□ 2.76
MRPL28-205ENST00000447696 LOC102724428A0A0B4J2F2 783 aa32.28■■■□□ 2.76
MRPL28-205ENST00000447696 PPP2R1AP30153 589 aa32.28■■■□□ 2.76
MRPL28-205ENST00000447696 SIK1P57059 783 aa32.28■■■□□ 2.76
MRPL28-205ENST00000447696 AKAP4Q5JQC9 854 aa32.28■■■□□ 2.76
MRPL28-205ENST00000447696 ATG3Q9NT62 314 aa32.27■■■□□ 2.76
MRPL28-205ENST00000447696 CABP4P57796 275 aa32.26■■■□□ 2.75
MRPL28-205ENST00000447696 U2SURPO15042 1029 aaKnown RBP32.25■■■□□ 2.75
MRPL28-205ENST00000447696 C4BP0C0L5 1744 aa32.24■■■□□ 2.75
MRPL28-205ENST00000447696 KLHL34Q8N239 644 aa32.24■■■□□ 2.75
MRPL28-205ENST00000447696 ZNF831Q5JPB2 1677 aa32.21■■■□□ 2.75
MRPL28-205ENST00000447696 GRIN3BO60391 1043 aa32.21■■■□□ 2.75
MRPL28-205ENST00000447696 FLAD1Q8NFF5 587 aa32.21■■■□□ 2.75
MRPL28-205ENST00000447696 SCN11AQ9UI33 1791 aa32.21■■■□□ 2.75
MRPL28-205ENST00000447696 MTHFSDQ2M296 383 aaKnown RBP32.2■■■□□ 2.75
MRPL28-205ENST00000447696 PELP1Q8IZL8 1130 aaKnown RBP32.2■■■□□ 2.75
MRPL28-205ENST00000447696 NUDCQ9Y266 331 aa32.2■■■□□ 2.75
MRPL28-205ENST00000447696 COL24A1Q17RW2 1714 aa32.2■■■□□ 2.74
MRPL28-205ENST00000447696 AK7Q96M32 723 aa32.19■■■□□ 2.74
MRPL28-205ENST00000447696 MRC1P22897 1456 aa32.18■■■□□ 2.74
MRPL28-205ENST00000447696 ATP6V1AP38606 617 aa32.18■■■□□ 2.74
MRPL28-205ENST00000447696 COL23A1Q86Y22 540 aaPredicted RBP32.18■■■□□ 2.74
MRPL28-205ENST00000447696 ITPK1Q13572 414 aa32.17■■■□□ 2.74
MRPL28-205ENST00000447696 NFATC2IPQ8NCF5 419 aa32.17■■■□□ 2.74
MRPL28-205ENST00000447696 LINC00116Q8NCU8 138 aa32.17■■■□□ 2.74
MRPL28-205ENST00000447696 ADAMTS7Q9UKP4 1686 aa32.17■■■□□ 2.74
MRPL28-205ENST00000447696 RNMTO43148 476 aaKnown RBP32.14■■■□□ 2.74
MRPL28-205ENST00000447696 GAS2L2Q8NHY3 880 aa32.14■■■□□ 2.74
MRPL28-205ENST00000447696 SLC52A2Q9HAB3 445 aa32.14■■■□□ 2.74
MRPL28-205ENST00000447696 MSH5O43196 834 aa32.13■■■□□ 2.73
MRPL28-205ENST00000447696 IFFO2Q5TF58 517 aa32.13■■■□□ 2.73
MRPL28-205ENST00000447696 UBR3Q6ZT12 1888 aa32.12■■■□□ 2.73
MRPL28-205ENST00000447696 SLC4A9Q96Q91 983 aa32.12■■■□□ 2.73
MRPL28-205ENST00000447696 RBM42Q9BTD8 480 aaKnown RBP32.12■■■□□ 2.73
MRPL28-205ENST00000447696 RSPH6AQ9H0K4 717 aa32.12■■■□□ 2.73
MRPL28-205ENST00000447696 LGR6Q9HBX8 967 aa32.12■■■□□ 2.73
MRPL28-205ENST00000447696 SSFA2P28290 1259 aa32.11■■■□□ 2.73
MRPL28-205ENST00000447696 NLGN2Q8NFZ4 835 aa32.11■■■□□ 2.73
MRPL28-205ENST00000447696 U2AF1L5P0DN76 240 aaPredicted RBP32.09■■■□□ 2.73
MRPL28-205ENST00000447696 PRKAR2BP31323 418 aa32.09■■■□□ 2.73
MRPL28-205ENST00000447696 ZEB1P37275 1124 aaPredicted RBP32.09■■■□□ 2.73
MRPL28-205ENST00000447696 U2AF1Q01081 240 aaKnown RBP eCLIP32.09■■■□□ 2.73
MRPL28-205ENST00000447696 CICQ96RK0 1608 aaPredicted RBP32.08■■■□□ 2.73
MRPL28-205ENST00000447696 GOLGB1Q14789 3259 aaKnown RBP32.07■■■□□ 2.72
MRPL28-205ENST00000447696 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.07■■■□□ 2.72
MRPL28-205ENST00000447696 GNPATO15228 680 aa32.07■■■□□ 2.72
MRPL28-205ENST00000447696 AMIGO3Q86WK7 504 aa32.07■■■□□ 2.72
MRPL28-205ENST00000447696 COL5A3P25940 1745 aaPredicted RBP32.06■■■□□ 2.72
MRPL28-205ENST00000447696 CNTNAP4Q9C0A0 1308 aa32.06■■■□□ 2.72
MRPL28-205ENST00000447696 GNAT3A8MTJ3 354 aa32.06■■■□□ 2.72
MRPL28-205ENST00000447696 FCHSD2O94868 740 aa32.06■■■□□ 2.72
MRPL28-205ENST00000447696 DDX10Q13206 875 aaKnown RBP32.06■■■□□ 2.72
MRPL28-205ENST00000447696 RC3H1Q5TC82 1133 aaKnown RBP32.06■■■□□ 2.72
MRPL28-205ENST00000447696 VIRMAQ69YN4 1812 aaKnown RBP32.05■■■□□ 2.72
MRPL28-205ENST00000447696 PTCD1O75127 700 aaKnown RBP32.05■■■□□ 2.72
MRPL28-205ENST00000447696 RALBP1Q15311 655 aa32.05■■■□□ 2.72
MRPL28-205ENST00000447696 PHF14O94880 888 aa32.04■■■□□ 2.72
MRPL28-205ENST00000447696 PHACTR3Q96KR7 559 aa32.04■■■□□ 2.72
MRPL28-205ENST00000447696 YBX3P16989 372 aaKnown RBP eCLIP32.02■■■□□ 2.729e-6■□□□□ 10.4
MRPL28-205ENST00000447696 MSL1Q68DK7 614 aa32■■■□□ 2.71
MRPL28-205ENST00000447696 RTCBQ9Y3I0 505 aaKnown RBP32■■■□□ 2.71
MRPL28-205ENST00000447696 CD2APQ9Y5K6 639 aa32■■■□□ 2.71
MRPL28-205ENST00000447696 TJP1Q07157 1748 aa32■■■□□ 2.71
MRPL28-205ENST00000447696 ADRA2BP18089 450 aa31.99■■■□□ 2.71
MRPL28-205ENST00000447696 IL17REQ8NFR9 667 aa31.99■■■□□ 2.71
MRPL28-205ENST00000447696 CEMIPQ8WUJ3 1361 aa31.98■■■□□ 2.71
MRPL28-205ENST00000447696 SMIM5Q71RC9 77 aa31.98■■■□□ 2.71
MRPL28-205ENST00000447696 KCPQ6ZWJ8 1503 aa31.98■■■□□ 2.71
MRPL28-205ENST00000447696 CEP350Q5VT06 3117 aa31.98■■■□□ 2.71
MRPL28-205ENST00000447696 TEFQ10587 303 aa31.97■■■□□ 2.71
MRPL28-205ENST00000447696 RPS6KA4O75676 772 aa31.96■■■□□ 2.71
MRPL28-205ENST00000447696 SLC39A6Q13433 755 aa31.96■■■□□ 2.71
MRPL28-205ENST00000447696 TRAPPC3LQ5T215 181 aa31.95■■■□□ 2.71
MRPL28-205ENST00000447696 ATP10DQ9P241 1426 aa31.94■■■□□ 2.7
MRPL28-205ENST00000447696 CRKLP46109 303 aaKnown RBP31.94■■■□□ 2.7
MRPL28-205ENST00000447696 SIPA1L3O60292 1781 aaPredicted RBP31.94■■■□□ 2.7
MRPL28-205ENST00000447696 UBR2Q8IWV8 1755 aa31.94■■■□□ 2.7
MRPL28-205ENST00000447696 VSIG10Q8N0Z9 540 aa31.93■■■□□ 2.7
MRPL28-205ENST00000447696 GPBP1L1Q9HC44 474 aaPredicted RBP31.93■■■□□ 2.7
MRPL28-205ENST00000447696 MYH14Q7Z406 1995 aaKnown RBP31.92■■■□□ 2.7
MRPL28-205ENST00000447696 TTC5Q8N0Z6 440 aa31.91■■■□□ 2.7
MRPL28-205ENST00000447696 MYBBP1AQ9BQG0 1328 aaKnown RBP31.91■■■□□ 2.7
MRPL28-205ENST00000447696 NEFMP07197 916 aa31.9■■■□□ 2.7
MRPL28-205ENST00000447696 DNAJC10Q8IXB1 793 aa31.9■■■□□ 2.7
MRPL28-205ENST00000447696 HTATSF1O43719 755 aaKnown RBP31.89■■■□□ 2.7
MRPL28-205ENST00000447696 RTF1Q92541 710 aaKnown RBP31.89■■■□□ 2.7
MRPL28-205ENST00000447696 ARHGEF1Q92888 912 aaKnown RBP31.89■■■□□ 2.7
MRPL28-205ENST00000447696 PNNQ9H307 717 aaKnown RBP31.88■■■□□ 2.69
MRPL28-205ENST00000447696 INTS5Q6P9B9 1019 aaKnown RBP31.87■■■□□ 2.69
MRPL28-205ENST00000447696 ZNF790Q6PG37 636 aa31.87■■■□□ 2.69
MRPL28-205ENST00000447696 CCDC87Q9NVE4 849 aa31.87■■■□□ 2.69
MRPL28-205ENST00000447696 CYP19A1P11511 503 aaPredicted RBP31.86■■■□□ 2.69
MRPL28-205ENST00000447696 RFC4P35249 363 aa31.86■■■□□ 2.69
MRPL28-205ENST00000447696 NLGN1Q8N2Q7 840 aa31.85■■■□□ 2.69
MRPL28-205ENST00000447696 PLEKHF1Q96S99 279 aa31.85■■■□□ 2.69
MRPL28-205ENST00000447696 ADCY9O60503 1353 aa31.84■■■□□ 2.69
MRPL28-205ENST00000447696 C4AP0C0L4 1744 aa31.84■■■□□ 2.69
MRPL28-205ENST00000447696 HSPA6P17066 643 aa31.84■■■□□ 2.69
MRPL28-205ENST00000447696 ZNF496Q96IT1 587 aaPredicted RBP31.83■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms